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The map label for this gene is 52141283

Identifier: 52141283

GI number: 52141283

Start: 4083910

End: 4084485

Strand: Direct

Name: 52141283

Synonym: BCZK3966

Alternate gene names: NA

Gene position: 4083910-4084485 (Clockwise)

Preceding gene: 52141285

Following gene: 52141280

Centisome position: 77.04

GC content: 36.98

Gene sequence:

>576_bases
ATGACAGCAAACCGCATTAAAGCTGTAGCACTTTCTCATTTCGCACGCTACGGCTACGAAGGAACTTCATTAGCAAATAT
TGCTCAAGAAGTCGGGATTAAAAAACCATCAATTTACGCACACTTTAAAGGAAAAGAAGAGCTATATTTTATATGCTTAG
AATCCGCTCTTCAAAAAGATTTACAGAGCTTCACAGGCGATATCGAAAAGTTTTCAAATTCGTCTACTGAAGAATTGCTC
TTACAATTACTAAAGGGCTATGCAAAACGATTTGGTGAAAGTGAAGAATCAATGTTTTGGTTACGAACTTCTTATTTTCC
GCCTGATGCATTTCGCGAACAAATTATTAATAAAGCAAATGTACACATTGAAAACGTCGGAAAACTTTTATTCCCTGTAT
TTAAAAGAGCAAGCGAACGAGATGAGTTGCATAACATTGAAGTAAAAGACGCCTTAGAGGCTTTTCTATGCTTACTTGAC
GGTCTTATGGTTGAACTACTATACGCAGGTTTAAATCGTTTTGAGACACGTTTAGACGCTTCTTGGAAAGTATTCTGGCG
TGGACTTTCAAACTGA

Upstream 100 bases:

>100_bases
AGAGCGTTACCTATAGCGCTCTTTTTCAGCTCTTCACCTATTGACTTTATATTTTTACTCGCATATAATAAACCTAACGA
ACGGTAGGTAGGGGATGAAA

Downstream 100 bases:

>100_bases
CGGATTGCTCCTTTGCAATGCGTCGTTTTTAAGCCCTTTACCTAACGACTGGTAGGAAGGAGAAATGACATATGGCATGG
ATTTATGTAATCTTAGCTGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcription Regulator TetR/AcrR Family; Transcriptional Regulator; Transcription Regulator TetR/AcrR Family Protein; TetR Family Regulatory Protein; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTANRIKAVALSHFARYGYEGTSLANIAQEVGIKKPSIYAHFKGKEELYFICLESALQKDLQSFTGDIEKFSNSSTEELL
LQLLKGYAKRFGESEESMFWLRTSYFPPDAFREQIINKANVHIENVGKLLFPVFKRASERDELHNIEVKDALEAFLCLLD
GLMVELLYAGLNRFETRLDASWKVFWRGLSN

Sequences:

>Translated_191_residues
MTANRIKAVALSHFARYGYEGTSLANIAQEVGIKKPSIYAHFKGKEELYFICLESALQKDLQSFTGDIEKFSNSSTEELL
LQLLKGYAKRFGESEESMFWLRTSYFPPDAFREQIINKANVHIENVGKLLFPVFKRASERDELHNIEVKDALEAFLCLLD
GLMVELLYAGLNRFETRLDASWKVFWRGLSN
>Mature_190_residues
TANRIKAVALSHFARYGYEGTSLANIAQEVGIKKPSIYAHFKGKEELYFICLESALQKDLQSFTGDIEKFSNSSTEELLL
QLLKGYAKRFGESEESMFWLRTSYFPPDAFREQIINKANVHIENVGKLLFPVFKRASERDELHNIEVKDALEAFLCLLDG
LMVELLYAGLNRFETRLDASWKVFWRGLSN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21943; Mature: 21812

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTANRIKAVALSHFARYGYEGTSLANIAQEVGIKKPSIYAHFKGKEELYFICLESALQKD
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
LQSFTGDIEKFSNSSTEELLLQLLKGYAKRFGESEESMFWLRTSYFPPDAFREQIINKAN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCCHHHHHHHHHHHC
VHIENVGKLLFPVFKRASERDELHNIEVKDALEAFLCLLDGLMVELLYAGLNRFETRLDA
CHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SWKVFWRGLSN
HHHHHHCCCCC
>Mature Secondary Structure 
TANRIKAVALSHFARYGYEGTSLANIAQEVGIKKPSIYAHFKGKEELYFICLESALQKD
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
LQSFTGDIEKFSNSSTEELLLQLLKGYAKRFGESEESMFWLRTSYFPPDAFREQIINKAN
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHEEEHHHCCCCCHHHHHHHHHHHC
VHIENVGKLLFPVFKRASERDELHNIEVKDALEAFLCLLDGLMVELLYAGLNRFETRLDA
CHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SWKVFWRGLSN
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA