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The map label for this gene is yclJ [H]

Identifier: 52140690

GI number: 52140690

Start: 4653658

End: 4654347

Strand: Reverse

Name: yclJ [H]

Synonym: BCZK4564

Alternate gene names: 52140690

Gene position: 4654347-4653658 (Counterclockwise)

Preceding gene: 52140687

Following gene: 52140693

Centisome position: 87.8

GC content: 35.65

Gene sequence:

>690_bases
ATGTCAAAAAATATTTTAATTGTAGAAGATGAAGATATATTACGTGAAATATTAAAAGACTATTTTTTAAGTGAGCAATA
TGTAGTGTTCGAAGCAAGGGACGGGAAAGAAGCTTTAGTTGTATTTGAGGAAGAAGAGGTTGATTTAGTTATTCTTGATA
TTATGTTGCCGGAACTTGATGGGTGGTCCGTTTGCCGAAGAATCCGTAAAACATCCGAGGTTCCTATCATTATGCTGACG
GCACGTGTTGATGAAGATGATACGTTACTTGGCTTTGAACTTGGAGCAGATGACTATGTGACGAAGCCGTATAGTCCGCC
AATTTTATTAGCAAGAGCGAAAAGGTTATTAGAAAGTAGAAAAGTGACGAAGCGACTTTTAGAGAATGAAGATGATACAT
TATCAATCCATGGCATCCATGTCCATTTTCCGTCGCGTACTGTTACGGTAGATAGAACAGACATTAATTTAACACATACA
GAATTTGAAATATTAGCGTATTTTATGAGAAACCAAGGGATTGTTTTAACAAGAGAGCAACTTATATCAAGAATTTGGGG
ATATGAATTTGCTGGTGACGATCGAACGGTTAATAGTCATATTCGTAATTTAAGAAATAAATTAGGAGAGAAAGCAAAGT
ACATTACAACTGTAGTACGAACGGGTTATAAATTTGAGGGGAATGTATGA

Upstream 100 bases:

>100_bases
AGGGGATGCACCGGATAGATATATTATCGAGGCGAAGTTAACTGCTAGTTATTCAAAGTGAAATTGTAGTTTCTCAAAGT
GGGAGGGGGATACATAAGTT

Downstream 100 bases:

>100_bases
GAAAGGGAATTGTACTAAAGTTATTTACTCTCACAACAGCATTATGTATGTTAATTTTAGCGACGATTTTTATTGGACAA
ACGATATTTTTTAAGCAATA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELDGWSVCRRIRKTSEVPIIMLT
ARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESRKVTKRLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHT
EFEILAYFMRNQGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV

Sequences:

>Translated_229_residues
MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELDGWSVCRRIRKTSEVPIIMLT
ARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESRKVTKRLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHT
EFEILAYFMRNQGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV
>Mature_228_residues
SKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELDGWSVCRRIRKTSEVPIIMLTA
RVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESRKVTKRLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTE
FEILAYFMRNQGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV

Specific function: Could be member of the two-component regulatory system yclK/yclJ [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788394, Length=232, Percent_Identity=37.0689655172414, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1786599, Length=230, Percent_Identity=35.6521739130435, Blast_Score=140, Evalue=8e-35,
Organism=Escherichia coli, GI1790863, Length=235, Percent_Identity=35.7446808510638, Blast_Score=137, Evalue=9e-34,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=34.5291479820628, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=36, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787229, Length=231, Percent_Identity=35.0649350649351, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1786911, Length=225, Percent_Identity=32, Blast_Score=120, Evalue=9e-29,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=31.4410480349345, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1790860, Length=231, Percent_Identity=33.7662337662338, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI2367329, Length=224, Percent_Identity=32.1428571428571, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=32.15859030837, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI145693140, Length=231, Percent_Identity=31.1688311688312, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=32.4444444444444, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1789402, Length=223, Percent_Identity=31.8385650224215, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1788550, Length=101, Percent_Identity=34.6534653465347, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI145693157, Length=100, Percent_Identity=34, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1787487, Length=104, Percent_Identity=32.6923076923077, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26592; Mature: 26461

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELD
CCCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCC
GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR
CHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
KVTKRLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTEFEILAYFMRNQGIVLTREQ
HHHHHHHCCCCCEEEEEEEEEEECCEEEEEECCCCEEEHHHHHHHHHHHHCCCEEEEHHH
LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV
HHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC
>Mature Secondary Structure 
SKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELD
CCCEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEEEECCCCC
GWSVCRRIRKTSEVPIIMLTARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESR
CHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
KVTKRLLENEDDTLSIHGIHVHFPSRTVTVDRTDINLTHTEFEILAYFMRNQGIVLTREQ
HHHHHHHCCCCCEEEEEEEEEEECCEEEEEECCCCEEEHHHHHHHHHHHHCCCEEEEHHH
LISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV
HHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]