Click here to switch to the map view.

The map label for this gene is yhcS [H]

Identifier: 52140687

GI number: 52140687

Start: 4654387

End: 4655007

Strand: Reverse

Name: yhcS [H]

Synonym: BCZK4565

Alternate gene names: 52140687

Gene position: 4655007-4654387 (Counterclockwise)

Preceding gene: 52140688

Following gene: 52140690

Centisome position: 87.82

GC content: 36.88

Gene sequence:

>621_bases
ATGAAGTTACTCAATTATATCGGTATCATATTGATGGCTATAGGACTATTTATGGGATCATATTATGCTGTGGAATGGTA
TAAAGGAAAAAGCTCTGCCGGGCAACTAACGAAGGAAGAAATAAAGAGCCTTAACAATATACAACATAATCAACTTTCAC
ATGAAACCCCCGTAACTTCTCAAGTCCCTTCTTCTCAAACAGAGCATAAAGAAGGAGAAAAGGTAGCGATGTTACATATA
CCGAAAATAAAGAAGAAGTTTTCTGTATATTGGGGAGCGGATGATGCAACGCTGAAAAAAGGGGTTGGAATGTTCGTTAG
TGATGTAACGACAACGCCATCTGGAGGGGGCCATACTGTACTAAGTGGGCACCGGGATACGGTCTTTACAGATTTAGGAG
AGTTAAAAGAAAAAGATACTCTTGTTTTAGAGTATGATAATAAAACGTACACATATGAAATTCAAAAAATATGGATTACC
CATGCGGATGATCGTACTGTTATTATAAAAAAAGAAGAACAGATATTAACACTGACGACTTGCTATCCATTTAATTATAT
AGGGGATGCACCGGATAGATATATTATCGAGGCGAAGTTAACTGCTAGTTATTCAAAGTGA

Upstream 100 bases:

>100_bases
TTAAGGCGTAATTATAATATTGCCCTATAAAGAATGGGATAATTTCATATATTAAAAATGGTAGGTTATTCCTACCATTT
TTGGCATGGAGGAATGAAGA

Downstream 100 bases:

>100_bases
AATTGTAGTTTCTCAAAGTGGGAGGGGGATACATAAGTTATGTCAAAAAATATTTTAATTGTAGAAGATGAAGATATATT
ACGTGAAATATTAAAAGACT

Product: sortase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKLLNYIGIILMAIGLFMGSYYAVEWYKGKSSAGQLTKEEIKSLNNIQHNQLSHETPVTSQVPSSQTEHKEGEKVAMLHI
PKIKKKFSVYWGADDATLKKGVGMFVSDVTTTPSGGGHTVLSGHRDTVFTDLGELKEKDTLVLEYDNKTYTYEIQKIWIT
HADDRTVIIKKEEQILTLTTCYPFNYIGDAPDRYIIEAKLTASYSK

Sequences:

>Translated_206_residues
MKLLNYIGIILMAIGLFMGSYYAVEWYKGKSSAGQLTKEEIKSLNNIQHNQLSHETPVTSQVPSSQTEHKEGEKVAMLHI
PKIKKKFSVYWGADDATLKKGVGMFVSDVTTTPSGGGHTVLSGHRDTVFTDLGELKEKDTLVLEYDNKTYTYEIQKIWIT
HADDRTVIIKKEEQILTLTTCYPFNYIGDAPDRYIIEAKLTASYSK
>Mature_206_residues
MKLLNYIGIILMAIGLFMGSYYAVEWYKGKSSAGQLTKEEIKSLNNIQHNQLSHETPVTSQVPSSQTEHKEGEKVAMLHI
PKIKKKFSVYWGADDATLKKGVGMFVSDVTTTPSGGGHTVLSGHRDTVFTDLGELKEKDTLVLEYDNKTYTYEIQKIWIT
HADDRTVIIKKEEQILTLTTCYPFNYIGDAPDRYIIEAKLTASYSK

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 23233; Mature: 23233

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLNYIGIILMAIGLFMGSYYAVEWYKGKSSAGQLTKEEIKSLNNIQHNQLSHETPVTS
CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHCCHHCCCCCCCCCCC
QVPSSQTEHKEGEKVAMLHIPKIKKKFSVYWGADDATLKKGVGMFVSDVTTTPSGGGHTV
CCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHCCCEEEEEEECCCCCCCCEE
LSGHRDTVFTDLGELKEKDTLVLEYDNKTYTYEIQKIWITHADDRTVIIKKEEQILTLTT
ECCCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEEEECCCCEEEEECCCEEEEEEE
CYPFNYIGDAPDRYIIEAKLTASYSK
ECCCCCCCCCCCCEEEEEEEEECCCC
>Mature Secondary Structure
MKLLNYIGIILMAIGLFMGSYYAVEWYKGKSSAGQLTKEEIKSLNNIQHNQLSHETPVTS
CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHCCHHCCCCCCCCCCC
QVPSSQTEHKEGEKVAMLHIPKIKKKFSVYWGADDATLKKGVGMFVSDVTTTPSGGGHTV
CCCCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHCCCEEEEEEECCCCCCCCEE
LSGHRDTVFTDLGELKEKDTLVLEYDNKTYTYEIQKIWITHADDRTVIIKKEEQILTLTT
ECCCCCHHHHHHHHHCCCCEEEEEECCCEEEEEEEEEEEEECCCCEEEEECCCEEEEEEE
CYPFNYIGDAPDRYIIEAKLTASYSK
ECCCCCCCCCCCCEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]