Click here to switch to the map view.

The map label for this gene is yvcP [H]

Identifier: 51894349

GI number: 51894349

Start: 3428314

End: 3429024

Strand: Reverse

Name: yvcP [H]

Synonym: STH3214

Alternate gene names: 51894349

Gene position: 3429024-3428314 (Counterclockwise)

Preceding gene: 51894350

Following gene: 51894348

Centisome position: 96.16

GC content: 67.93

Gene sequence:

>711_bases
GTGACGGAGGGACGCCGCTTCCGCATCCTGATCGTCGAGGACGACGAGAAGATCGCGTCGATCCTGGCCGACGAGTTCGT
CCGCTACGGGTATGACGTCGTCCTCGCGCGCGACTACGCCAACATCAAGGGAGAATTTGTGGCGGCCCGACCGGACGTCG
TGCTCATGGACATCAACCTGCCCCGGTACGACGGCTACTACTGGTGCCGGCAGATCCGCACCGTGTCCCGGGTGCCGATC
CTCTTCATCTCCGCCCGCTCGGACCAGATGGACCAGGTGCGGGCGATTGACCACGGCGCGGACGACTACATCACCAAGCC
GTTCAACCTGGAGCTGGCCCGGGCCAAGGTGAAGGCGGCCATCCGCCGGGCCTACGGCGAGTATGCCGCCGCCGGTGAGG
CCGACCTGCTCAGGGTCGGGCCCCTGGTTCTGGACCGCGCGACCAACCGGGTGAGCTGCGGCGACCGGACGGTGGAGCTG
AGCCCCAAGGAGTTCCGGCTGCTGTGGTGCCTGGCGCGCCGGGCGGGGGAGATCGTCGGCCGGGAGACGCTGCTGGAGGA
GCTGTGGGACGACACCGAGTTCGTGGACGACAATACTCTCACTGTGAACGTGACCCGGGTCCGGCGTCGGCTGGAGGAGC
TGGGCCTTACCGGGGTGATCGAGACCAAGCGGGGCCAGGGCTATCGGCTGAACGCCGGCTGGGGGGAGTGA

Upstream 100 bases:

>100_bases
TGGCGACCCTGGCCGCCGAGAACCTGGTGGCCGCCCTCACGGGGAAGCAGCCGCCCACCCCCGTGAACCCTGAGGTGCTC
CGGCGGGAGGAGAGGCAGCC

Downstream 100 bases:

>100_bases
CGTGCGCTTCTGGCAGTTTCTGTGGGACCGGATCAACTACATCGCCGTCTACGTGGCCTTCGCTGCGCTGTCCCTCGTGG
TGGTCCACCTGGACCTCATG

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTEGRRFRILIVEDDEKIASILADEFVRYGYDVVLARDYANIKGEFVAARPDVVLMDINLPRYDGYYWCRQIRTVSRVPI
LFISARSDQMDQVRAIDHGADDYITKPFNLELARAKVKAAIRRAYGEYAAAGEADLLRVGPLVLDRATNRVSCGDRTVEL
SPKEFRLLWCLARRAGEIVGRETLLEELWDDTEFVDDNTLTVNVTRVRRRLEELGLTGVIETKRGQGYRLNAGWGE

Sequences:

>Translated_236_residues
MTEGRRFRILIVEDDEKIASILADEFVRYGYDVVLARDYANIKGEFVAARPDVVLMDINLPRYDGYYWCRQIRTVSRVPI
LFISARSDQMDQVRAIDHGADDYITKPFNLELARAKVKAAIRRAYGEYAAAGEADLLRVGPLVLDRATNRVSCGDRTVEL
SPKEFRLLWCLARRAGEIVGRETLLEELWDDTEFVDDNTLTVNVTRVRRRLEELGLTGVIETKRGQGYRLNAGWGE
>Mature_235_residues
TEGRRFRILIVEDDEKIASILADEFVRYGYDVVLARDYANIKGEFVAARPDVVLMDINLPRYDGYYWCRQIRTVSRVPIL
FISARSDQMDQVRAIDHGADDYITKPFNLELARAKVKAAIRRAYGEYAAAGEADLLRVGPLVLDRATNRVSCGDRTVELS
PKEFRLLWCLARRAGEIVGRETLLEELWDDTEFVDDNTLTVNVTRVRRRLEELGLTGVIETKRGQGYRLNAGWGE

Specific function: Member of the two-component regulatory system yvcQ/yvcP [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=228, Percent_Identity=32.0175438596491, Blast_Score=134, Evalue=7e-33,
Organism=Escherichia coli, GI1788394, Length=226, Percent_Identity=33.6283185840708, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=31.140350877193, Blast_Score=121, Evalue=4e-29,
Organism=Escherichia coli, GI1786911, Length=205, Percent_Identity=31.7073170731707, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1787375, Length=223, Percent_Identity=30.0448430493274, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI1790860, Length=228, Percent_Identity=28.5087719298246, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1790552, Length=229, Percent_Identity=34.4978165938865, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1786784, Length=231, Percent_Identity=29.8701298701299, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1789402, Length=226, Percent_Identity=33.1858407079646, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI2367329, Length=225, Percent_Identity=28.8888888888889, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=29.3859649122807, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=26.9911504424779, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=28.82096069869, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI145693140, Length=229, Percent_Identity=27.9475982532751, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1788550, Length=167, Percent_Identity=27.5449101796407, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26992; Mature: 26861

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEGRRFRILIVEDDEKIASILADEFVRYGYDVVLARDYANIKGEFVAARPDVVLMDINL
CCCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCEEEEEECC
PRYDGYYWCRQIRTVSRVPILFISARSDQMDQVRAIDHGADDYITKPFNLELARAKVKAA
CCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHH
IRRAYGEYAAAGEADLLRVGPLVLDRATNRVSCGDRTVELSPKEFRLLWCLARRAGEIVG
HHHHHHHHHCCCCCCEEEECHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
RETLLEELWDDTEFVDDNTLTVNVTRVRRRLEELGLTGVIETKRGQGYRLNAGWGE
HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCC
>Mature Secondary Structure 
TEGRRFRILIVEDDEKIASILADEFVRYGYDVVLARDYANIKGEFVAARPDVVLMDINL
CCCCEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCEEEEEECC
PRYDGYYWCRQIRTVSRVPILFISARSDQMDQVRAIDHGADDYITKPFNLELARAKVKAA
CCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHCCCCCHHCCCCCCHHHHHHHHHHH
IRRAYGEYAAAGEADLLRVGPLVLDRATNRVSCGDRTVELSPKEFRLLWCLARRAGEIVG
HHHHHHHHHCCCCCCEEEECHHHHHCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHH
RETLLEELWDDTEFVDDNTLTVNVTRVRRRLEELGLTGVIETKRGQGYRLNAGWGE
HHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]