| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894317
Identifier: 51894317
GI number: 51894317
Start: 3389626
End: 3391719
Strand: Reverse
Name: 51894317
Synonym: STH3182
Alternate gene names: NA
Gene position: 3391719-3389626 (Counterclockwise)
Preceding gene: 51894318
Following gene: 51894314
Centisome position: 95.11
GC content: 71.39
Gene sequence:
>2094_bases ATGACCAGCTTGCGATTGCGGGCGGCCTCTGCGCTTCTCGCCCTGACGCTTCTCGTCACCGGTTGCGCCCGGCAGACGCC GCAGCAGCAGGAGGATGTGCCGACGCTGGAGCAGCTGCGGGAGCGTGCCGCGGCGGCCTTTGACGGCACCGCCTCCAGCG CGCAGCGGCGCACGGCGGCAGAGAACGCCGTGCGCACCCTGCTCGGCCTGCTGCAGCGGCCCGAATCCTTCCAGATCAGC GACGACGAGTGGACGGCGTCTCCCCGCCCCGGCCTGGAGGCCATGGTCCGCCACATCGACCTGGGCGCCGGGATCCACCT CTATGCGCTGGCGCTGCCCGGGCGGACCCTGGTGGACGAGATCGACCGGGTTGCGGTGCAGGTGCGGTCGGGCAACTCGC CCCGCGCCTTCGAGCTCTCGCCGCTGCCGGCGGCGCGCTTGGTGTCGGCCTACCTGCACGACACGCCCGGCGCGCGGCGA ATCACCCTGGCCCTGCAGGAGAACGAGCGGAGCGGTTACATCGCGCACTTCTCCGGTCCGGCGGCTGGCCCGTTTGAGCT TGTGACCGACGCCTTCGCCGGAATGGAGGGGACCTACGGCCCGGCGCGGCTGACCGTGGTCGACGGGACCCTGCAGGTGG CGCTGGAGCAGGGGACGTGGTCGCCGGCCTTCGATCCGAAGGACGGGTCGCTGCATCTGGCGACCGAGATCTTCCTGAAG TTTGACGGGCGCTTTTCGCTGGCGGACGAATCCCGCTTTGACGCCTTTGCGCTGCTGGACATCGCCGCAGATCCGCTCCG GCGGTGCCAGCGGGAGGGCGACTGCCCCGAGGCGGTGACCGCGCGGGTCGGCACTTCGCGCGAGCAGGCGGCCGAGGCCG CCTGGGAACTGGCGAAGGCGAAGCTGACTCGGCAGTTGGAGGCCGGCTGGTCAGACAGCCTCACCGCCCGGCTCCCAACG GGATCCCGCATGCTGTCGGACGAGGGCCGCGGCCTCTCGGTGAGCCTGCTGAGCATCCCTGCCCCCGGCCAGTACCTGAA GGGACGGTACTTCAACGTCGTCCAGTTCCGCACCAGCGGCGTGCCCGCGACCCGGGCGCTGCCCCTGCCAGGGCTGGTGG AGTCGGTGCGGGGGTTTGCGCACCGCGGCATGCCGGCGATGCTGGTGGTTGTGGACGACTCGGCAGGGCAGGAGGACGTG GGGACGGCGAAGCGCACCCTCTACCTGCTCAGGCTGGACGCGGGGAATGACTGGCAGTTCGCGTCCGACTGGGTGGGCTA CGTCACCCGCGCGCCGTACTGGAATATCGGGGACGTGACCGCCGATGAGATCACCATCTCCTGGGAGCCCGCGCTGTACC CGCTGTTCAGCGTGGAACTCCAGGACGGAGACGAGCCGCACGTGACCGTCTGCCAGTACCCCGGCCGGTGCCACCAGCTG ACGTGGGTCGACGGCCGGCTGCATTCGCTGCCGCTCCTCACCCACTACATGGGGGAGCTCACCCGCCCGCACGGGGAGGA GGACCTGGTATGGGCGGCCAGCCAGATGGCCGAGTTCCTGGCCCTGGTGGACCCCGCCGCCCTGACGGGCGGACGGCTGA GCCAGCTGGTCGACCCCGACGGGTCGCTGGGGATCCGGGTCTTCGATGTCGGGGAGAACACCCGGGTGATCACCCTGCCG ACGGGCCCCGGCGGCATGGGCATGGCCGTGATCCACGCCCCGGGACAGGCGGAGCTGGTGAAGACCTATGACGGCGTGGT GACACGGTGGGAGGGGGCGCAGATCGTCCAGGCCGGCCAGGAGAAGCGGCTCCTGCTGCTGGGCCGCTCCGACCGGGCGG CGGTGCTGCTCGCCTACCGCCAGCAGGGCGGCAGGTGGGTGCCGGTGGACGCGCTGGACGAGGCGGTCGACCGGAACGCG CTGCTGACGCTCAGAGTGACCCACACCCCCGGCGCCGAGCGGCCGGCCAGGGGGGTCGTCGTCCAGGGCGCCTTCGGGGT TTCTGCCTCGCTCACCGGCGGCGGCGCCTCCTTCTGCGAGGGCGGGGCCCTCTGCATGAACTACCGGTACGACGGCGGAT GGGTGCTCAGATAA
Upstream 100 bases:
>100_bases GCGGCGGAGGCGTAGGCCGGCGGGGAAGGAAAGGGCGAGCGCTCGGGCGAAACAGTGGCGTAGCGGTACACATCCAAAAT CCAGCCAACGGAGGTACTCC
Downstream 100 bases:
>100_bases CAAGCAGACGGACAGCCTGCACCGGAGGTGCAGGCTCAGGCTGCAGACAAAGGCGCCTCTTGTGGCCGCTCAGCGGCTCA CAGGAGGCGCTTCTTGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 697; Mature: 696
Protein sequence:
>697_residues MTSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAAENAVRTLLGLLQRPESFQIS DDEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDEIDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARR ITLALQENERSGYIAHFSGPAAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLK FDGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKAKLTRQLEAGWSDSLTARLPT GSRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSGVPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDV GTAKRTLYLLRLDAGNDWQFASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQL TWVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPDGSLGIRVFDVGENTRVITLP TGPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQEKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNA LLTLRVTHTPGAERPARGVVVQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR
Sequences:
>Translated_697_residues MTSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAAENAVRTLLGLLQRPESFQIS DDEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDEIDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARR ITLALQENERSGYIAHFSGPAAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLK FDGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKAKLTRQLEAGWSDSLTARLPT GSRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSGVPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDV GTAKRTLYLLRLDAGNDWQFASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQL TWVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPDGSLGIRVFDVGENTRVITLP TGPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQEKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNA LLTLRVTHTPGAERPARGVVVQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR >Mature_696_residues TSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAAENAVRTLLGLLQRPESFQISD DEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDEIDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARRI TLALQENERSGYIAHFSGPAAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLKF DGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKAKLTRQLEAGWSDSLTARLPTG SRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSGVPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDVG TAKRTLYLLRLDAGNDWQFASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQLT WVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPDGSLGIRVFDVGENTRVITLPT GPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQEKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNAL LTLRVTHTPGAERPARGVVVQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75251; Mature: 75120
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAA CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH ENAVRTLLGLLQRPESFQISDDEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDE HHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHH IDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARRITLALQENERSGYIAHFSGP HHHEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCC AAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLK CCCHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEE FDGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKA ECCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHH KLTRQLEAGWSDSLTARLPTGSRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSG HHHHHHHCCCCCCCEEECCCCCCEECCCCCCEEEEEEECCCCCHHHCCCEEEEEEEEECC VPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDVGTAKRTLYLLRLDAGNDWQF CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCC ASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQL HHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCEEEE TWVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPD EEECCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHCCCC GSLGIRVFDVGENTRVITLPTGPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQ CCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHCCEEEECCCCHHHHCCC EKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNALLTLRVTHTPGAERPARGVV CCEEEEEECCCCEEEEEEEECCCCEEEEHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEE VQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR EEECCCCEEEECCCCHHHCCCCEEEEEEEECCCEEEC >Mature Secondary Structure TSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAA CCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH ENAVRTLLGLLQRPESFQISDDEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDE HHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHH IDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARRITLALQENERSGYIAHFSGP HHHEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCC AAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLK CCCHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEE FDGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKA ECCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHH KLTRQLEAGWSDSLTARLPTGSRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSG HHHHHHHCCCCCCCEEECCCCCCEECCCCCCEEEEEEECCCCCHHHCCCEEEEEEEEECC VPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDVGTAKRTLYLLRLDAGNDWQF CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCC ASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQL HHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCEEEE TWVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPD EEECCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHCCCC GSLGIRVFDVGENTRVITLPTGPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQ CCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHCCEEEECCCCHHHHCCC EKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNALLTLRVTHTPGAERPARGVV CCEEEEEECCCCEEEEEEEECCCCEEEEHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEE VQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR EEECCCCEEEECCCCHHHCCCCEEEEEEEECCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA