Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894317

Identifier: 51894317

GI number: 51894317

Start: 3389626

End: 3391719

Strand: Reverse

Name: 51894317

Synonym: STH3182

Alternate gene names: NA

Gene position: 3391719-3389626 (Counterclockwise)

Preceding gene: 51894318

Following gene: 51894314

Centisome position: 95.11

GC content: 71.39

Gene sequence:

>2094_bases
ATGACCAGCTTGCGATTGCGGGCGGCCTCTGCGCTTCTCGCCCTGACGCTTCTCGTCACCGGTTGCGCCCGGCAGACGCC
GCAGCAGCAGGAGGATGTGCCGACGCTGGAGCAGCTGCGGGAGCGTGCCGCGGCGGCCTTTGACGGCACCGCCTCCAGCG
CGCAGCGGCGCACGGCGGCAGAGAACGCCGTGCGCACCCTGCTCGGCCTGCTGCAGCGGCCCGAATCCTTCCAGATCAGC
GACGACGAGTGGACGGCGTCTCCCCGCCCCGGCCTGGAGGCCATGGTCCGCCACATCGACCTGGGCGCCGGGATCCACCT
CTATGCGCTGGCGCTGCCCGGGCGGACCCTGGTGGACGAGATCGACCGGGTTGCGGTGCAGGTGCGGTCGGGCAACTCGC
CCCGCGCCTTCGAGCTCTCGCCGCTGCCGGCGGCGCGCTTGGTGTCGGCCTACCTGCACGACACGCCCGGCGCGCGGCGA
ATCACCCTGGCCCTGCAGGAGAACGAGCGGAGCGGTTACATCGCGCACTTCTCCGGTCCGGCGGCTGGCCCGTTTGAGCT
TGTGACCGACGCCTTCGCCGGAATGGAGGGGACCTACGGCCCGGCGCGGCTGACCGTGGTCGACGGGACCCTGCAGGTGG
CGCTGGAGCAGGGGACGTGGTCGCCGGCCTTCGATCCGAAGGACGGGTCGCTGCATCTGGCGACCGAGATCTTCCTGAAG
TTTGACGGGCGCTTTTCGCTGGCGGACGAATCCCGCTTTGACGCCTTTGCGCTGCTGGACATCGCCGCAGATCCGCTCCG
GCGGTGCCAGCGGGAGGGCGACTGCCCCGAGGCGGTGACCGCGCGGGTCGGCACTTCGCGCGAGCAGGCGGCCGAGGCCG
CCTGGGAACTGGCGAAGGCGAAGCTGACTCGGCAGTTGGAGGCCGGCTGGTCAGACAGCCTCACCGCCCGGCTCCCAACG
GGATCCCGCATGCTGTCGGACGAGGGCCGCGGCCTCTCGGTGAGCCTGCTGAGCATCCCTGCCCCCGGCCAGTACCTGAA
GGGACGGTACTTCAACGTCGTCCAGTTCCGCACCAGCGGCGTGCCCGCGACCCGGGCGCTGCCCCTGCCAGGGCTGGTGG
AGTCGGTGCGGGGGTTTGCGCACCGCGGCATGCCGGCGATGCTGGTGGTTGTGGACGACTCGGCAGGGCAGGAGGACGTG
GGGACGGCGAAGCGCACCCTCTACCTGCTCAGGCTGGACGCGGGGAATGACTGGCAGTTCGCGTCCGACTGGGTGGGCTA
CGTCACCCGCGCGCCGTACTGGAATATCGGGGACGTGACCGCCGATGAGATCACCATCTCCTGGGAGCCCGCGCTGTACC
CGCTGTTCAGCGTGGAACTCCAGGACGGAGACGAGCCGCACGTGACCGTCTGCCAGTACCCCGGCCGGTGCCACCAGCTG
ACGTGGGTCGACGGCCGGCTGCATTCGCTGCCGCTCCTCACCCACTACATGGGGGAGCTCACCCGCCCGCACGGGGAGGA
GGACCTGGTATGGGCGGCCAGCCAGATGGCCGAGTTCCTGGCCCTGGTGGACCCCGCCGCCCTGACGGGCGGACGGCTGA
GCCAGCTGGTCGACCCCGACGGGTCGCTGGGGATCCGGGTCTTCGATGTCGGGGAGAACACCCGGGTGATCACCCTGCCG
ACGGGCCCCGGCGGCATGGGCATGGCCGTGATCCACGCCCCGGGACAGGCGGAGCTGGTGAAGACCTATGACGGCGTGGT
GACACGGTGGGAGGGGGCGCAGATCGTCCAGGCCGGCCAGGAGAAGCGGCTCCTGCTGCTGGGCCGCTCCGACCGGGCGG
CGGTGCTGCTCGCCTACCGCCAGCAGGGCGGCAGGTGGGTGCCGGTGGACGCGCTGGACGAGGCGGTCGACCGGAACGCG
CTGCTGACGCTCAGAGTGACCCACACCCCCGGCGCCGAGCGGCCGGCCAGGGGGGTCGTCGTCCAGGGCGCCTTCGGGGT
TTCTGCCTCGCTCACCGGCGGCGGCGCCTCCTTCTGCGAGGGCGGGGCCCTCTGCATGAACTACCGGTACGACGGCGGAT
GGGTGCTCAGATAA

Upstream 100 bases:

>100_bases
GCGGCGGAGGCGTAGGCCGGCGGGGAAGGAAAGGGCGAGCGCTCGGGCGAAACAGTGGCGTAGCGGTACACATCCAAAAT
CCAGCCAACGGAGGTACTCC

Downstream 100 bases:

>100_bases
CAAGCAGACGGACAGCCTGCACCGGAGGTGCAGGCTCAGGCTGCAGACAAAGGCGCCTCTTGTGGCCGCTCAGCGGCTCA
CAGGAGGCGCTTCTTGGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 697; Mature: 696

Protein sequence:

>697_residues
MTSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAAENAVRTLLGLLQRPESFQIS
DDEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDEIDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARR
ITLALQENERSGYIAHFSGPAAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLK
FDGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKAKLTRQLEAGWSDSLTARLPT
GSRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSGVPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDV
GTAKRTLYLLRLDAGNDWQFASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQL
TWVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPDGSLGIRVFDVGENTRVITLP
TGPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQEKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNA
LLTLRVTHTPGAERPARGVVVQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR

Sequences:

>Translated_697_residues
MTSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAAENAVRTLLGLLQRPESFQIS
DDEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDEIDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARR
ITLALQENERSGYIAHFSGPAAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLK
FDGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKAKLTRQLEAGWSDSLTARLPT
GSRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSGVPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDV
GTAKRTLYLLRLDAGNDWQFASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQL
TWVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPDGSLGIRVFDVGENTRVITLP
TGPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQEKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNA
LLTLRVTHTPGAERPARGVVVQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR
>Mature_696_residues
TSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAAENAVRTLLGLLQRPESFQISD
DEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDEIDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARRI
TLALQENERSGYIAHFSGPAAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLKF
DGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKAKLTRQLEAGWSDSLTARLPTG
SRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSGVPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDVG
TAKRTLYLLRLDAGNDWQFASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQLT
WVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPDGSLGIRVFDVGENTRVITLPT
GPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQEKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNAL
LTLRVTHTPGAERPARGVVVQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75251; Mature: 75120

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAA
CCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
ENAVRTLLGLLQRPESFQISDDEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDE
HHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHH
IDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARRITLALQENERSGYIAHFSGP
HHHEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCC
AAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLK
CCCHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEE
FDGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKA
ECCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
KLTRQLEAGWSDSLTARLPTGSRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSG
HHHHHHHCCCCCCCEEECCCCCCEECCCCCCEEEEEEECCCCCHHHCCCEEEEEEEEECC
VPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDVGTAKRTLYLLRLDAGNDWQF
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCC
ASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQL
HHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCEEEE
TWVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPD
EEECCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHCCCC
GSLGIRVFDVGENTRVITLPTGPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQ
CCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHCCEEEECCCCHHHHCCC
EKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNALLTLRVTHTPGAERPARGVV
CCEEEEEECCCCEEEEEEEECCCCEEEEHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEE
VQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR
EEECCCCEEEECCCCHHHCCCCEEEEEEEECCCEEEC
>Mature Secondary Structure 
TSLRLRAASALLALTLLVTGCARQTPQQQEDVPTLEQLRERAAAAFDGTASSAQRRTAA
CCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
ENAVRTLLGLLQRPESFQISDDEWTASPRPGLEAMVRHIDLGAGIHLYALALPGRTLVDE
HHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEECCCCHHHHH
IDRVAVQVRSGNSPRAFELSPLPAARLVSAYLHDTPGARRITLALQENERSGYIAHFSGP
HHHEEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEECCC
AAGPFELVTDAFAGMEGTYGPARLTVVDGTLQVALEQGTWSPAFDPKDGSLHLATEIFLK
CCCHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCCCEEEEEEEEEE
FDGRFSLADESRFDAFALLDIAADPLRRCQREGDCPEAVTARVGTSREQAAEAAWELAKA
ECCEEEECCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHH
KLTRQLEAGWSDSLTARLPTGSRMLSDEGRGLSVSLLSIPAPGQYLKGRYFNVVQFRTSG
HHHHHHHCCCCCCCEEECCCCCCEECCCCCCEEEEEEECCCCCHHHCCCEEEEEEEEECC
VPATRALPLPGLVESVRGFAHRGMPAMLVVVDDSAGQEDVGTAKRTLYLLRLDAGNDWQF
CCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCC
ASDWVGYVTRAPYWNIGDVTADEITISWEPALYPLFSVELQDGDEPHVTVCQYPGRCHQL
HHHHHHHHHCCCCCCCCCCEECEEEEEECCCCCEEEEEEECCCCCCCEEEECCCCCEEEE
TWVDGRLHSLPLLTHYMGELTRPHGEEDLVWAASQMAEFLALVDPAALTGGRLSQLVDPD
EEECCCHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHCCCC
GSLGIRVFDVGENTRVITLPTGPGGMGMAVIHAPGQAELVKTYDGVVTRWEGAQIVQAGQ
CCCEEEEEECCCCCEEEEECCCCCCCCEEEEECCCCCHHHHHHCCEEEECCCCHHHHCCC
EKRLLLLGRSDRAAVLLAYRQQGGRWVPVDALDEAVDRNALLTLRVTHTPGAERPARGVV
CCEEEEEECCCCEEEEEEEECCCCEEEEHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEE
VQGAFGVSASLTGGGASFCEGGALCMNYRYDGGWVLR
EEECCCCEEEECCCCHHHCCCCEEEEEEEECCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA