Click here to switch to the map view.

The map label for this gene is 51894314

Identifier: 51894314

GI number: 51894314

Start: 3386545

End: 3387018

Strand: Reverse

Name: 51894314

Synonym: STH3179

Alternate gene names: NA

Gene position: 3387018-3386545 (Counterclockwise)

Preceding gene: 51894317

Following gene: 51894313

Centisome position: 94.98

GC content: 67.72

Gene sequence:

>474_bases
ATGGTCAGCGTGGACCTCATGAGCGTGGCCATGATCGAGGAGACCGCAACCGTCATCCTGGTGCTGCGTGCAGCGACGTT
GAAGCGCCTCCTGGTGATGGAAGTGGGTCTGCTGGAAGGCCGGGCCATCACGCTGGAAGTGGAAGGGATCCGGACGCCCC
GCCCGCTGACCCACGAACTGACCCTCCGAGTGATGGAGGCCCTGGGGGCGACGATAACCCGGGTGGTGATCTGCGACTAC
CGCGACAGGACGTTTTTCGCCAGCCTGGAGCTGCGCACCGCGGACGGCCGGGAGCTGACGATCGATGCCCGCCCGAGCGA
CGCCCTGGCCCTCGCGCTGCGGCTGAAGGTGCCGATCATGGCGGAGGAGAAGGTGCTGGACGAGGCCGGTCTGGACGAGC
ACGAGCTGTCGGAGCGGCAGGCCCGGTTCCAGGTGCCGGAGAGCGATGACGAGGGGGAGCCCGTCCTGCACTAG

Upstream 100 bases:

>100_bases
GCGGCCGAGAGCCCGTCCACCCGGCCGTTCCTGCGCGGGCCCTCGCTTTCCAGCGGGGATCGGGTGGCGTATACTTGAAC
TTGGGAAGGGGGCACTCCAA

Downstream 100 bases:

>100_bases
CAGGCGGACCTTCTCTACGTGCAGCCAGTGCCGAGGGGGGAACTGGATTGGAGCGCAGGTTCGGAGAGTTGAACCCGCCA
CAGCGGCTTCTGATGGGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MVSVDLMSVAMIEETATVILVLRAATLKRLLVMEVGLLEGRAITLEVEGIRTPRPLTHELTLRVMEALGATITRVVICDY
RDRTFFASLELRTADGRELTIDARPSDALALALRLKVPIMAEEKVLDEAGLDEHELSERQARFQVPESDDEGEPVLH

Sequences:

>Translated_157_residues
MVSVDLMSVAMIEETATVILVLRAATLKRLLVMEVGLLEGRAITLEVEGIRTPRPLTHELTLRVMEALGATITRVVICDY
RDRTFFASLELRTADGRELTIDARPSDALALALRLKVPIMAEEKVLDEAGLDEHELSERQARFQVPESDDEGEPVLH
>Mature_157_residues
MVSVDLMSVAMIEETATVILVLRAATLKRLLVMEVGLLEGRAITLEVEGIRTPRPLTHELTLRVMEALGATITRVVICDY
RDRTFFASLELRTADGRELTIDARPSDALALALRLKVPIMAEEKVLDEAGLDEHELSERQARFQVPESDDEGEPVLH

Specific function: Unknown

COG id: COG1259

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003729 [H]

Pfam domain/function: PF02577 DUF151 [H]

EC number: NA

Molecular weight: Translated: 17476; Mature: 17476

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSVDLMSVAMIEETATVILVLRAATLKRLLVMEVGLLEGRAITLEVEGIRTPRPLTHEL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHH
TLRVMEALGATITRVVICDYRDRTFFASLELRTADGRELTIDARPSDALALALRLKVPIM
HHHHHHHHCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCEEEEEEEECCCC
AEEKVLDEAGLDEHELSERQARFQVPESDDEGEPVLH
CHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCCCCCC
>Mature Secondary Structure
MVSVDLMSVAMIEETATVILVLRAATLKRLLVMEVGLLEGRAITLEVEGIRTPRPLTHEL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHH
TLRVMEALGATITRVVICDYRDRTFFASLELRTADGRELTIDARPSDALALALRLKVPIM
HHHHHHHHCCCEEEEEEECCCCCEEEEEEEEEECCCCEEEEECCCCCCEEEEEEEECCCC
AEEKVLDEAGLDEHELSERQARFQVPESDDEGEPVLH
CHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]