Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894294

Identifier: 51894294

GI number: 51894294

Start: 3356067

End: 3357320

Strand: Reverse

Name: 51894294

Synonym: STH3159

Alternate gene names: NA

Gene position: 3357320-3356067 (Counterclockwise)

Preceding gene: 51894296

Following gene: 51894293

Centisome position: 94.14

GC content: 71.53

Gene sequence:

>1254_bases
ATGGTGCGCAGGGCCTGGTGGGTCGTTCTGACGCTCGCCATGGTGCTGGCCGCACAGTGGATGATGGCGCGCGGCCACGC
GGACCTGGCGGTGAACGAGGAGCTGCTGGCGGGGAATCCGACGCTGCACGTGTCGGCGGAGGAGGAGTACCGGGGTACCG
TCATTGTGCTGCACGGGTTTGGCGGCAGCAAAGAGATGATGCAGTACTGGGGCTACGCGCTGGCCCGCCTGGGCTTCGAC
GTCTACATCCCGGACTTGCCCGGCCACGGGGCGCAGACCGCGCCAATGGCCGATTCCCCCGGGACCGCGAACCAGGTGAG
GGATGCGCTGGTTGCCGCCGGCCGGGCCGAACCGGACCGGGTGGGTCTGATCGGCCATCCGACGTCCCTGAATCCCCTGG
CCCCCTTGTATGACTTGGATGCCGTGGCCGATGCGGCGGGGCGGCTGTCCAGCGACGTCGGTGGCGATGTGCCGGCAGGC
GCCGCCCCGGGCGGGTCGCCCGCCTGGCTGCTGCTCGGGCTGGCGGGCGGCGTCGGTGCGCTCCCTGCGGTGGCCGCGCT
GGTGCGACCCGATCCCCGGAGATCCGGCCGGCGGCAGCAGCCCGCGGGTCTTGTCACCGGCCTGGCCGCCGTGGCGGTCT
CCCTGCTCAGCGCGGTTCTGGCCGTGGTCTACCTGCGCGTGCCGCAGCTGGGCGTCGCCACGCTGGACTACCTGCTACCC
TATTTCCTGGTCGCGGCTGTCGTTCTCCTGCTCCTCCGCAAGCTTTGGCCGCGGGAGTTCGGCGCGTCCGCCCCGGGCGA
GGCCGAGTCGGTTCCCCACTCCCTGCTGCGGGGGCTGGCGGTGGCTCTGGCCTTCCTCGGGGCTCTCGTGCCGGTGATTC
ATCAGAATGTCACCTATTTTGTACCGACGGGGCCGCGAATCCTGCCGCTGGCCGCCACTGCGCTGGCCTACTGGCTGTAC
GCCTTCCAGGAGGAGTCGCTGAAGCGGGCCGTGGCGGGCGGGCCGTCGCCGGCGGGCCTTGTGCTGGGGCTTGCGGCCAA
GATCCTGATGGTCGCCACCTGGGTCGGGGCGGGGGTTCTGCCCAATCCGCCTGCGCACCTGCCCGCCGTTCTCCCCGTTG
CCCTCGGGGTGTTGGTCACGTTGGAGATCCTGAGCGGCGTGCTGGCCGCGATGCGCCTCTCCGCGCTGAGCGTCGCGCTG
GCGGAGGCGGTGGCGGTCGGCTGGACGGCCGCGGTGATGCTGCCGCTGTTATGA

Upstream 100 bases:

>100_bases
GGCGCCGGAAGCAGGGGATTCACACACAGGTATGGAAGGAAGAATACGAATATACCCTGATACTTCAGGCACAGTAACAA
CCGGGTTGGGGGACAGGACG

Downstream 100 bases:

>100_bases
GGGGTTAACATAGACCTCCCCGCGTGGCGTGGGTATAATAGACCCCGCCACCGACTTTTTTTGCGGGGGTGAAAGGGTTG
TCCGAACCGCTCCTGAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGFGGSKEMMQYWGYALARLGFD
VYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDRVGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAG
AAPGGSPAWLLLGLAGGVGALPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP
YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYFVPTGPRILPLAATALAYWLY
AFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVLPNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVAL
AEAVAVGWTAAVMLPLL

Sequences:

>Translated_417_residues
MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGFGGSKEMMQYWGYALARLGFD
VYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDRVGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAG
AAPGGSPAWLLLGLAGGVGALPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP
YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYFVPTGPRILPLAATALAYWLY
AFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVLPNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVAL
AEAVAVGWTAAVMLPLL
>Mature_417_residues
MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGFGGSKEMMQYWGYALARLGFD
VYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDRVGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAG
AAPGGSPAWLLLGLAGGVGALPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP
YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYFVPTGPRILPLAATALAYWLY
AFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVLPNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVAL
AEAVAVGWTAAVMLPLL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43093; Mature: 43093

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHCCCCEEEEECCHHHCCEEEEEECC
GGSKEMMQYWGYALARLGFDVYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDR
CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
VGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAGAAPGGSPAWLLLGLAGGVGA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEHHCCHHH
LPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYF
HHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
VPTGPRILPLAATALAYWLYAFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVALAEAVAVGWTAAVMLPLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVRRAWWVVLTLAMVLAAQWMMARGHADLAVNEELLAGNPTLHVSAEEEYRGTVIVLHGF
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHCCCCEEEEECCHHHCCEEEEEECC
GGSKEMMQYWGYALARLGFDVYIPDLPGHGAQTAPMADSPGTANQVRDALVAAGRAEPDR
CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
VGLIGHPTSLNPLAPLYDLDAVADAAGRLSSDVGGDVPAGAAPGGSPAWLLLGLAGGVGA
EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEHHCCHHH
LPAVAALVRPDPRRSGRRQQPAGLVTGLAAVAVSLLSAVLAVVYLRVPQLGVATLDYLLP
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
YFLVAAVVLLLLRKLWPREFGASAPGEAESVPHSLLRGLAVALAFLGALVPVIHQNVTYF
HHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
VPTGPRILPLAATALAYWLYAFQEESLKRAVAGGPSPAGLVLGLAAKILMVATWVGAGVL
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PNPPAHLPAVLPVALGVLVTLEILSGVLAAMRLSALSVALAEAVAVGWTAAVMLPLL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA