| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is dfrA [H]
Identifier: 51894251
GI number: 51894251
Start: 3316303
End: 3316800
Strand: Reverse
Name: dfrA [H]
Synonym: STH3116
Alternate gene names: 51894251
Gene position: 3316800-3316303 (Counterclockwise)
Preceding gene: 51894252
Following gene: 51894250
Centisome position: 93.01
GC content: 70.28
Gene sequence:
>498_bases ATGGGCAGGAACCGCGCCATCGGCCGGGAGGGCCGCCTGCCCTGGCGGCTGCCGGCGGAGATGCGCCACTTCCGCCGCAC CACCATGGGCAAGGCGGTGGTGATGGGACGCAGGACCTACGAGTCGATCGGCGGCCCCCTGAAGGGGCGGACCAACATCG TGCTTACCCGGGACCCGGGCTTCCGGGCGCCGGGATGCGAGGTGCGCCACAGCGTCGCGGAGCTGCTGCAGGACCGCAGG CCGCTCTATGTCATCGGCGGCGCGGAGGTGTACCGCCAGTTCCTGCCTCATGCGGACGAGATGATCCTCACCCGCATTGA CCACGACTTCGAAGGGGACGCGTTCTTCCCGGCGTGGTCCGAGGACGAGTGGGAGCTGGTGGGGAGCACGCCCCACCCGC GGGACGAGGAGAACCCGTACGATTTCGTCGTCGAGCACTACCGCCGGCGGCGCATTCCCGCCGGCGGGGCCGGGCAGACT GAACCCGAAGGAGACTGA
Upstream 100 bases:
>100_bases AGATCGACCAGTTCACGATGGACGACATCCAGCTGGTGGACTACAAGCACCACCCGCCGATCCGCGGGGAGCTGTCGACA TGATCACCCTGGTGGCGGCG
Downstream 100 bases:
>100_bases GCTCGTGTCTGGACAGATCGAAGGACGGAACCCCGTGCTGGAGGCGCTCCGGTCGGGGCGGACCATCAACCGGATCCTGG TGGCAAAGGGAGCCCGGGAG
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MGRNRAIGREGRLPWRLPAEMRHFRRTTMGKAVVMGRRTYESIGGPLKGRTNIVLTRDPGFRAPGCEVRHSVAELLQDRR PLYVIGGAEVYRQFLPHADEMILTRIDHDFEGDAFFPAWSEDEWELVGSTPHPRDEENPYDFVVEHYRRRRIPAGGAGQT EPEGD
Sequences:
>Translated_165_residues MGRNRAIGREGRLPWRLPAEMRHFRRTTMGKAVVMGRRTYESIGGPLKGRTNIVLTRDPGFRAPGCEVRHSVAELLQDRR PLYVIGGAEVYRQFLPHADEMILTRIDHDFEGDAFFPAWSEDEWELVGSTPHPRDEENPYDFVVEHYRRRRIPAGGAGQT EPEGD >Mature_164_residues GRNRAIGREGRLPWRLPAEMRHFRRTTMGKAVVMGRRTYESIGGPLKGRTNIVLTRDPGFRAPGCEVRHSVAELLQDRRP LYVIGGAEVYRQFLPHADEMILTRIDHDFEGDAFFPAWSEDEWELVGSTPHPRDEENPYDFVVEHYRRRRIPAGGAGQTE PEGD
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=157, Percent_Identity=31.8471337579618, Blast_Score=72, Evalue=2e-13, Organism=Escherichia coli, GI1786233, Length=153, Percent_Identity=43.7908496732026, Blast_Score=124, Evalue=3e-30, Organism=Drosophila melanogaster, GI116008026, Length=164, Percent_Identity=30.4878048780488, Blast_Score=70, Evalue=5e-13, Organism=Drosophila melanogaster, GI24647458, Length=164, Percent_Identity=30.4878048780488, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18941; Mature: 18809
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRNRAIGREGRLPWRLPAEMRHFRRTTMGKAVVMGRRTYESIGGPLKGRTNIVLTRDPG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCC FRAPGCEVRHSVAELLQDRRPLYVIGGAEVYRQFLPHADEMILTRIDHDFEGDAFFPAWS CCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCHHHHHHHHCCCCCCCEECCCCC EDEWELVGSTPHPRDEENPYDFVVEHYRRRRIPAGGAGQTEPEGD CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure GRNRAIGREGRLPWRLPAEMRHFRRTTMGKAVVMGRRTYESIGGPLKGRTNIVLTRDPG CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCEEEECCCC FRAPGCEVRHSVAELLQDRRPLYVIGGAEVYRQFLPHADEMILTRIDHDFEGDAFFPAWS CCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHCCCCHHHHHHHHCCCCCCCEECCCCC EDEWELVGSTPHPRDEENPYDFVVEHYRRRRIPAGGAGQTEPEGD CCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840350; 9384377 [H]