| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is cheX2
Identifier: 51894144
GI number: 51894144
Start: 3225645
End: 3226163
Strand: Reverse
Name: cheX2
Synonym: STH3008
Alternate gene names: NA
Gene position: 3226163-3225645 (Counterclockwise)
Preceding gene: 51894145
Following gene: 51894143
Centisome position: 90.47
GC content: 65.7
Gene sequence:
>519_bases ATGAAAGTTGAATTCCTGAACCCCTTTGTCTACGCCGGGCTGAAGGTCCTGGCCTCCGAGGCCGGCCTGAAGAGCGTTGT CTCCGACAAGCCGCAGATGCGCAAGGCGATCGCCACGCTGCATGCCGTCAACGTGGTCATCGGCGTCATGGGCTCGGTTC AGGGGCTGGTCGTCTACGGCATGGAGCTGCACATGGCCAAGGGGATCATCCGGGCCATGACCGGCCAGGACTTCCCCATC ACCGATCCCATGGCCGAGTCGGCCCTGGGTGAGCTGGCGAACCTCATCACGGGCTACGCCTCCGGCACCCTGGAACAGGC CGGCTGGCCGAGCCGCATCTCGCCGCCGCGCATCGTCCGGGGCACGGGGGTCCGGTTTGCCAACTCGGCGATCAACATGC TGACCGTGCCCATCATCACGGAACTCGGGCAGATCACCATCTACCTGGCTCTGCGGGAGGTTCACCCCGCAGCCAGGGCG ACGGGCAGTGAGGGGCCCACGGGAGGGATGACAGGATGA
Upstream 100 bases:
>100_bases AACAAGCTCGCCTTCCAGGCCAAGCCCGGCGTGGTTGGCGAACGGATGGCCGTGCAGATCACGCGCCGGGTGACTTGAGA ACCGGTGAAGTGGTGGAGCC
Downstream 100 bases:
>100_bases TTCGGGGCATTGAAGCCTCCAGATCGGGCATGGCGGTGGAGCAGCTGCGCACGGACGTGCTGGCCGACAACATCGCCAAC ATGAATACGAGCGGGTTCAA
Product: chemotaxis protein
Products: NA
Alternate protein names: Chemotaxis Protein; CheC Domain-Containing Protein; Inhibitor Of MCP Methylation; Chemotaxis Protein CheX; Chec Domain Protein; Chemotaxis Protein CheC; CheX Protein
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKVEFLNPFVYAGLKVLASEAGLKSVVSDKPQMRKAIATLHAVNVVIGVMGSVQGLVVYGMELHMAKGIIRAMTGQDFPI TDPMAESALGELANLITGYASGTLEQAGWPSRISPPRIVRGTGVRFANSAINMLTVPIITELGQITIYLALREVHPAARA TGSEGPTGGMTG
Sequences:
>Translated_172_residues MKVEFLNPFVYAGLKVLASEAGLKSVVSDKPQMRKAIATLHAVNVVIGVMGSVQGLVVYGMELHMAKGIIRAMTGQDFPI TDPMAESALGELANLITGYASGTLEQAGWPSRISPPRIVRGTGVRFANSAINMLTVPIITELGQITIYLALREVHPAARA TGSEGPTGGMTG >Mature_172_residues MKVEFLNPFVYAGLKVLASEAGLKSVVSDKPQMRKAIATLHAVNVVIGVMGSVQGLVVYGMELHMAKGIIRAMTGQDFPI TDPMAESALGELANLITGYASGTLEQAGWPSRISPPRIVRGTGVRFANSAINMLTVPIITELGQITIYLALREVHPAARA TGSEGPTGGMTG
Specific function: Unknown
COG id: COG1406
COG function: function code N; Predicted inhibitor of MCP methylation, homolog of CheC
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18076; Mature: 18076
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVEFLNPFVYAGLKVLASEAGLKSVVSDKPQMRKAIATLHAVNVVIGVMGSVQGLVVYG CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MELHMAKGIIRAMTGQDFPITDPMAESALGELANLITGYASGTLEQAGWPSRISPPRIVR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE GTGVRFANSAINMLTVPIITELGQITIYLALREVHPAARATGSEGPTGGMTG CCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKVEFLNPFVYAGLKVLASEAGLKSVVSDKPQMRKAIATLHAVNVVIGVMGSVQGLVVYG CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH MELHMAKGIIRAMTGQDFPITDPMAESALGELANLITGYASGTLEQAGWPSRISPPRIVR HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE GTGVRFANSAINMLTVPIITELGQITIYLALREVHPAARATGSEGPTGGMTG CCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA