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The map label for this gene is fliM [H]

Identifier: 51894145

GI number: 51894145

Start: 3226186

End: 3227112

Strand: Reverse

Name: fliM [H]

Synonym: STH3009

Alternate gene names: 51894145

Gene position: 3227112-3226186 (Counterclockwise)

Preceding gene: 51894146

Following gene: 51894144

Centisome position: 90.49

GC content: 63.86

Gene sequence:

>927_bases
ATGGAGAACCCACTGAGCCAAGCGGAAATCGATGCCCTTGTAATGAGTACGGGCACCAACATCCGCACCTACGATTTTCG
CAGGCCGAGCAAGTTCAACAAGGACTTGATCCGGACGCTGGTGCTGGTGCACGAGAACCTGGCCCGGCTGCTGCAGTCCT
ACCTGTCCGCGGGACTGCGCACCTGGGTCCAGATCACCGTGCGCTCCACCAACCAGTACACCTTCTCGGAGTTCACCCAG
CTTCTCCCCAACCCCACCATTGCGCTCTCCTTCCGGCTCAATCCCCTTCCCGGCATGTGCCTGCTGGAGATCAGTCACAA
TATTGCCTTCGCCATTGTCGAGCGGGTTTTTGGGGGTCCCGGGAGCGATCTGCAGCCCCAGCGTGAACTGACCGAGATCG
AACTGGGCATCATCCAGCGGGTGGTCCGGGACACCTTCGGTCCGATGAAAGAGGCCTGGCGGAACGTGGCGGAGATCGAT
CCGGCCATTGAGGCGGTGGAGACCAACCCCGTGTTCATCCAGATCGAAAACCCCACCGAGGTGGTGGCCGCCATCACCCT
GGCGGTGGAGATCGGCGAACACCTGGGGCACATGACCTTCGCGTTCCCGTACTCCACCGTGGAACCCGTGTTGTCCCGTC
TTTCGCCCCAGTCGTGGCTGGCCGAGACCAAGCACAAGAGCCCGTCGGACGAGGAGAGCCTGCGCCGCGCCGTGCAGGAG
GCCCCCCTCCCGGTGAAGGCGCTGCTGGGCAAGACCCGCATGCGGCTCGGCGAGTTTCTCGCGTTACAGGTCGGCGACGT
CATCCGGCTGGATGCCCGGGTGGGCGGCGAACTCCCCGTCTTCGTGGGGAACAAGCTCGCCTTCCAGGCCAAGCCCGGCG
TGGTTGGCGAACGGATGGCCGTGCAGATCACGCGCCGGGTGACTTGA

Upstream 100 bases:

>100_bases
GAATACTGTTACACAACGTGAATATTCATAGAAATAATGGGTGGTCATTCCAGCTTCCCATCGCGGTCGGACTCCCTCAG
CTCAACGGAGGGTTGCACAC

Downstream 100 bases:

>100_bases
GAACCGGTGAAGTGGTGGAGCCATGAAAGTTGAATTCCTGAACCCCTTTGTCTACGCCGGGCTGAAGGTCCTGGCCTCCG
AGGCCGGCCTGAAGAGCGTT

Product: flagellar motor switch protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MENPLSQAEIDALVMSTGTNIRTYDFRRPSKFNKDLIRTLVLVHENLARLLQSYLSAGLRTWVQITVRSTNQYTFSEFTQ
LLPNPTIALSFRLNPLPGMCLLEISHNIAFAIVERVFGGPGSDLQPQRELTEIELGIIQRVVRDTFGPMKEAWRNVAEID
PAIEAVETNPVFIQIENPTEVVAAITLAVEIGEHLGHMTFAFPYSTVEPVLSRLSPQSWLAETKHKSPSDEESLRRAVQE
APLPVKALLGKTRMRLGEFLALQVGDVIRLDARVGGELPVFVGNKLAFQAKPGVVGERMAVQITRRVT

Sequences:

>Translated_308_residues
MENPLSQAEIDALVMSTGTNIRTYDFRRPSKFNKDLIRTLVLVHENLARLLQSYLSAGLRTWVQITVRSTNQYTFSEFTQ
LLPNPTIALSFRLNPLPGMCLLEISHNIAFAIVERVFGGPGSDLQPQRELTEIELGIIQRVVRDTFGPMKEAWRNVAEID
PAIEAVETNPVFIQIENPTEVVAAITLAVEIGEHLGHMTFAFPYSTVEPVLSRLSPQSWLAETKHKSPSDEESLRRAVQE
APLPVKALLGKTRMRLGEFLALQVGDVIRLDARVGGELPVFVGNKLAFQAKPGVVGERMAVQITRRVT
>Mature_308_residues
MENPLSQAEIDALVMSTGTNIRTYDFRRPSKFNKDLIRTLVLVHENLARLLQSYLSAGLRTWVQITVRSTNQYTFSEFTQ
LLPNPTIALSFRLNPLPGMCLLEISHNIAFAIVERVFGGPGSDLQPQRELTEIELGIIQRVVRDTFGPMKEAWRNVAEID
PAIEAVETNPVFIQIENPTEVVAAITLAVEIGEHLGHMTFAFPYSTVEPVLSRLSPQSWLAETKHKSPSDEESLRRAVQE
APLPVKALLGKTRMRLGEFLALQVGDVIRLDARVGGELPVFVGNKLAFQAKPGVVGERMAVQITRRVT

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=294, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 34335; Mature: 34335

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPLSQAEIDALVMSTGTNIRTYDFRRPSKFNKDLIRTLVLVHENLARLLQSYLSAGLR
CCCCCCHHHHHHHEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWVQITVRSTNQYTFSEFTQLLPNPTIALSFRLNPLPGMCLLEISHNIAFAIVERVFGGP
EEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCC
GSDLQPQRELTEIELGIIQRVVRDTFGPMKEAWRNVAEIDPAIEAVETNPVFIQIENPTE
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHCCCCCEEEEECCHHH
VVAAITLAVEIGEHLGHMTFAFPYSTVEPVLSRLSPQSWLAETKHKSPSDEESLRRAVQE
HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHH
APLPVKALLGKTRMRLGEFLALQVGDVIRLDARVGGELPVFVGNKLAFQAKPGVVGERMA
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCCCCCEEECCEEEEECCCCCCCCHHH
VQITRRVT
HHEECCCC
>Mature Secondary Structure
MENPLSQAEIDALVMSTGTNIRTYDFRRPSKFNKDLIRTLVLVHENLARLLQSYLSAGLR
CCCCCCHHHHHHHEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TWVQITVRSTNQYTFSEFTQLLPNPTIALSFRLNPLPGMCLLEISHNIAFAIVERVFGGP
EEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCC
GSDLQPQRELTEIELGIIQRVVRDTFGPMKEAWRNVAEIDPAIEAVETNPVFIQIENPTE
CCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHCCCCCEEEEECCHHH
VVAAITLAVEIGEHLGHMTFAFPYSTVEPVLSRLSPQSWLAETKHKSPSDEESLRRAVQE
HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHH
APLPVKALLGKTRMRLGEFLALQVGDVIRLDARVGGELPVFVGNKLAFQAKPGVVGERMA
CCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHCCCCCCEEECCEEEEECCCCCCCCHHH
VQITRRVT
HHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]