| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is flgG [H]
Identifier: 51894143
GI number: 51894143
Start: 3224953
End: 3225648
Strand: Reverse
Name: flgG [H]
Synonym: STH3007
Alternate gene names: 51894143
Gene position: 3225648-3224953 (Counterclockwise)
Preceding gene: 51894144
Following gene: 51894142
Centisome position: 90.45
GC content: 70.11
Gene sequence:
>696_bases ATGATTCGGGGCATTGAAGCCTCCAGATCGGGCATGGCGGTGGAGCAGCTGCGCACGGACGTGCTGGCCGACAACATCGC CAACATGAATACGAGCGGGTTCAAGCGGGCCACCGCGACGTCGGTGGAGTTCGACAGGATGCTGATCCACCGCATGGGCG ATCCCACGGACCCCAGGTCTCAGGAGGTGGGCACCTTGGGGAACGGCAGCCGGGTGGACCAGGTGGTGGTGGACGAGCGC CAGGGCGACATCTACGAGACGGGCCGGGCGCTGGACCTCGCGCTCGAGGGGCCCGGCTGGTTCCTGGCCCAGCGGCCGGA CGGCAGCCTCTACCGCACCCGGAACGGCGCCTTCCGCCAGATGGCCGACGGCACCATTACCACCGCCGAGGGATACCGGG TGCTGATGGAGGCCCCGGGCGGCCTGGTTCCGCTGGTGGTGCCCGGCGTGGAGCCCACCTTCCAGGCCGACGGCACGATC CTGGCGGACGGGATGCCCATCGGCCGGCTGGCCCTGGCCGATGCCGCCCCGGAGACCCGGCTGCACAGCCGGCGGCTGGA GGCCTCCAACGTGGATCTGGCCAAGGAGATGACCGACCTGATCGTCACCCTGCGGGCTTACCAGGTGAACCAGCGGGCGC TCCGGGTGCAGGACGAGACCCTGGCCCGGGCGGTCACCGAGATCGGCAAGGTCTGA
Upstream 100 bases:
>100_bases TCACGGAACTCGGGCAGATCACCATCTACCTGGCTCTGCGGGAGGTTCACCCCGCAGCCAGGGCGACGGGCAGTGAGGGG CCCACGGGAGGGATGACAGG
Downstream 100 bases:
>100_bases TGGACGGCGAGGAGGGGGATAGCCCATGATCGGTCGTGACCTGGCCGCCCGCATCGTGGAACAGGCCATCGACGCGGCGT CGCTGCGGCAGCGGGTGCTG
Product: flagellar basal body and hook proteins
Products: NA
Alternate protein names: Distal rod protein [H]
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MIRGIEASRSGMAVEQLRTDVLADNIANMNTSGFKRATATSVEFDRMLIHRMGDPTDPRSQEVGTLGNGSRVDQVVVDER QGDIYETGRALDLALEGPGWFLAQRPDGSLYRTRNGAFRQMADGTITTAEGYRVLMEAPGGLVPLVVPGVEPTFQADGTI LADGMPIGRLALADAAPETRLHSRRLEASNVDLAKEMTDLIVTLRAYQVNQRALRVQDETLARAVTEIGKV
Sequences:
>Translated_231_residues MIRGIEASRSGMAVEQLRTDVLADNIANMNTSGFKRATATSVEFDRMLIHRMGDPTDPRSQEVGTLGNGSRVDQVVVDER QGDIYETGRALDLALEGPGWFLAQRPDGSLYRTRNGAFRQMADGTITTAEGYRVLMEAPGGLVPLVVPGVEPTFQADGTI LADGMPIGRLALADAAPETRLHSRRLEASNVDLAKEMTDLIVTLRAYQVNQRALRVQDETLARAVTEIGKV >Mature_231_residues MIRGIEASRSGMAVEQLRTDVLADNIANMNTSGFKRATATSVEFDRMLIHRMGDPTDPRSQEVGTLGNGSRVDQVVVDER QGDIYETGRALDLALEGPGWFLAQRPDGSLYRTRNGAFRQMADGTITTAEGYRVLMEAPGGLVPLVVPGVEPTFQADGTI LADGMPIGRLALADAAPETRLHSRRLEASNVDLAKEMTDLIVTLRAYQVNQRALRVQDETLARAVTEIGKV
Specific function: Unknown
COG id: COG4786
COG function: function code N; Flagellar basal body rod protein
Gene ontology:
Cell location: Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787318, Length=260, Percent_Identity=28.4615384615385, Blast_Score=92, Evalue=3e-20,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR020013 - InterPro: IPR012834 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 25110; Mature: 25110
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRGIEASRSGMAVEQLRTDVLADNIANMNTSGFKRATATSVEFDRMLIHRMGDPTDPRS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCC QEVGTLGNGSRVDQVVVDERQGDIYETGRALDLALEGPGWFLAQRPDGSLYRTRNGAFRQ CCCCCCCCCCCCHHEEEECCCCCHHHCCCEEEEEEECCCEEEEECCCCCEEECCCCCHHH MADGTITTAEGYRVLMEAPGGLVPLVVPGVEPTFQADGTILADGMPIGRLALADAAPETR HCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCEEECCCCCHHH LHSRRLEASNVDLAKEMTDLIVTLRAYQVNQRALRVQDETLARAVTEIGKV HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHEECHHHHHHHHHHHCCC >Mature Secondary Structure MIRGIEASRSGMAVEQLRTDVLADNIANMNTSGFKRATATSVEFDRMLIHRMGDPTDPRS CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHCCCCCCCCC QEVGTLGNGSRVDQVVVDERQGDIYETGRALDLALEGPGWFLAQRPDGSLYRTRNGAFRQ CCCCCCCCCCCCHHEEEECCCCCHHHCCCEEEEEEECCCEEEEECCCCCEEECCCCCHHH MADGTITTAEGYRVLMEAPGGLVPLVVPGVEPTFQADGTILADGMPIGRLALADAAPETR HCCCEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEECCCCCCCEEECCCCCHHH LHSRRLEASNVDLAKEMTDLIVTLRAYQVNQRALRVQDETLARAVTEIGKV HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHEECHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9161424; 11743193; 11743194 [H]