| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is guaB [H]
Identifier: 51894052
GI number: 51894052
Start: 3144219
End: 3145679
Strand: Reverse
Name: guaB [H]
Synonym: STH2916
Alternate gene names: 51894052
Gene position: 3145679-3144219 (Counterclockwise)
Preceding gene: 51894054
Following gene: 51894051
Centisome position: 88.21
GC content: 67.62
Gene sequence:
>1461_bases ATGGACGCCAAGTTCGGGCCGGAGGCTTTGACTTTCGATGACGTACTGCTGGTCCCGGCGCACTCGGAGGTGCTCCCCCG GGACGTCGACGTCTCAACCCGGCTGACACGCAAGATACGGCTCAACATCCCCCTGGTGTCGGCAGCGATGGACACGGTGA CGGAGGCCCGCATGGCGATCGCCATGGCGCGCGAGGGCGGCATCGGCATCATCCATAAGTCGATGTCCATCGAGCGGCAG GCGGAGGAGGTCGACAAGGTCAAGCGTTCCGAACACGGCATCATCGTCGACCCGGTCTTCGTCCACCCCGACGACATGAT CGAGACGGCCCTGCAGCTCATGGCCCGGTACCGCATTTCCGGCACGCCGGTGGTGGAGCGGGGCACGCACAAGCTGGTGG GCATCCTCACCAACCGCGACCTGCGGTTCGAGGACAACTGGAATCAGCCCGTCGGCAACGTGATGACCCGGGAGAACCTG ATCACCGCTCCGGTGGGCACCACCCTGGAGCAGGCCCGGGAGATTCTGCGCCACGCCAAGGTGGAGAAGCTGCCGCTGGT GGACGAGCATGGGGTGCTGAAGGGGCTCATCACCATCAAGGACATCGAGAAGGCCAAGAAGTACCCCAACTCGGCCAAGG ACGAGCACGGCCGCCTGCTCTGCGGCGCGGCCGTCGGCGTGTCCGACGATCTGATGGAGCGGGCTGGCGCCCTGGTCGAC GCGGGCGTGGACGTCCTGGTGCTGGACTCCGCCCACGGCCACTCCCGGGGCATCATGGAGGCCCTTCGCAAGGTGAAGCG GAACTTCCCGCAGGTCCAGGTGATCGCGGGCAACGTGGCCACCTACGAGGGCACCCGCGACCTGATCGAGGCCGGCGCCG ACGCGGTGAAGGTGGGCATCGGGCCCGGGTCCATCTGCACCACCCGCGTGGTGGCGGGCATCGGCGTCCCGCAGATCACG GCGATCTACGAGTCGGCCAGGGCGGCCGACGAGTACGACGTGCCCATCATCGCGGACGGCGGCATCAAGTACTCGGGCGA CATCACCAAGGCCATTGCGGCCGGCGCCTCCGCCGTCATGATCGGCTCCCTCTTCGCCGGCACCGACGAGTCCCCCGGCG AGATGGAGATCTACCAGGGCCGCTCCTTCAAGGTCTACCGCGGGATGGGCTCCCTCGGCGCCATGAAGCAGGGTTCAGGC GACCGGTACTTCCAGGAGGGCGCGCCCAAGCTGGTGCCGGAGGGCATCGAGGGACGCGTGCCGTACCGGGGTCCCCTGGC GGAGATGGTCTTCCAGCTGGTGGGCGGCCTGCGGGCCGGCATGGGGTACTGCGGCACCCGCACCATCGAGGAGCTGCGCA AGAACGGGAAGTTCTGCCGCATCACCGCCGCGGGGCTGCGGGAGAGCCACCCGCACGACGTGATGATCACCAAGGAAGCG CCCAACTACAGCGCTACATAA
Upstream 100 bases:
>100_bases TCCACATGCAGAAACCCTGCGGGCGGCGGTTGCCGCCGGTTATACGCTATGGTATAATGCTTCAAATTCCGAGCACGAGG CTCAGTCGGAGGTCTGGATC
Downstream 100 bases:
>100_bases GAATGCAGGGCGAGGCGAAAACGGCGGCCCGGGCAGCGCAGCCCGGGCCCTTTGCTTGGGAATTGCGGGGGCTTCCTGGA CGGGGGTTCGGCTTTCTGTT
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MDAKFGPEALTFDDVLLVPAHSEVLPRDVDVSTRLTRKIRLNIPLVSAAMDTVTEARMAIAMAREGGIGIIHKSMSIERQ AEEVDKVKRSEHGIIVDPVFVHPDDMIETALQLMARYRISGTPVVERGTHKLVGILTNRDLRFEDNWNQPVGNVMTRENL ITAPVGTTLEQAREILRHAKVEKLPLVDEHGVLKGLITIKDIEKAKKYPNSAKDEHGRLLCGAAVGVSDDLMERAGALVD AGVDVLVLDSAHGHSRGIMEALRKVKRNFPQVQVIAGNVATYEGTRDLIEAGADAVKVGIGPGSICTTRVVAGIGVPQIT AIYESARAADEYDVPIIADGGIKYSGDITKAIAAGASAVMIGSLFAGTDESPGEMEIYQGRSFKVYRGMGSLGAMKQGSG DRYFQEGAPKLVPEGIEGRVPYRGPLAEMVFQLVGGLRAGMGYCGTRTIEELRKNGKFCRITAAGLRESHPHDVMITKEA PNYSAT
Sequences:
>Translated_486_residues MDAKFGPEALTFDDVLLVPAHSEVLPRDVDVSTRLTRKIRLNIPLVSAAMDTVTEARMAIAMAREGGIGIIHKSMSIERQ AEEVDKVKRSEHGIIVDPVFVHPDDMIETALQLMARYRISGTPVVERGTHKLVGILTNRDLRFEDNWNQPVGNVMTRENL ITAPVGTTLEQAREILRHAKVEKLPLVDEHGVLKGLITIKDIEKAKKYPNSAKDEHGRLLCGAAVGVSDDLMERAGALVD AGVDVLVLDSAHGHSRGIMEALRKVKRNFPQVQVIAGNVATYEGTRDLIEAGADAVKVGIGPGSICTTRVVAGIGVPQIT AIYESARAADEYDVPIIADGGIKYSGDITKAIAAGASAVMIGSLFAGTDESPGEMEIYQGRSFKVYRGMGSLGAMKQGSG DRYFQEGAPKLVPEGIEGRVPYRGPLAEMVFQLVGGLRAGMGYCGTRTIEELRKNGKFCRITAAGLRESHPHDVMITKEA PNYSAT >Mature_486_residues MDAKFGPEALTFDDVLLVPAHSEVLPRDVDVSTRLTRKIRLNIPLVSAAMDTVTEARMAIAMAREGGIGIIHKSMSIERQ AEEVDKVKRSEHGIIVDPVFVHPDDMIETALQLMARYRISGTPVVERGTHKLVGILTNRDLRFEDNWNQPVGNVMTRENL ITAPVGTTLEQAREILRHAKVEKLPLVDEHGVLKGLITIKDIEKAKKYPNSAKDEHGRLLCGAAVGVSDDLMERAGALVD AGVDVLVLDSAHGHSRGIMEALRKVKRNFPQVQVIAGNVATYEGTRDLIEAGADAVKVGIGPGSICTTRVVAGIGVPQIT AIYESARAADEYDVPIIADGGIKYSGDITKAIAAGASAVMIGSLFAGTDESPGEMEIYQGRSFKVYRGMGSLGAMKQGSG DRYFQEGAPKLVPEGIEGRVPYRGPLAEMVFQLVGGLRAGMGYCGTRTIEELRKNGKFCRITAAGLRESHPHDVMITKEA PNYSAT
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=453, Percent_Identity=44.8123620309051, Blast_Score=367, Evalue=1e-101, Organism=Homo sapiens, GI34328928, Length=453, Percent_Identity=44.8123620309051, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI156616279, Length=453, Percent_Identity=44.8123620309051, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI34328930, Length=453, Percent_Identity=44.8123620309051, Blast_Score=365, Evalue=1e-101, Organism=Homo sapiens, GI66933016, Length=453, Percent_Identity=43.4878587196468, Blast_Score=360, Evalue=1e-99, Organism=Homo sapiens, GI217035152, Length=447, Percent_Identity=44.9664429530201, Blast_Score=359, Evalue=4e-99, Organism=Homo sapiens, GI217035148, Length=453, Percent_Identity=43.9293598233996, Blast_Score=354, Evalue=8e-98, Organism=Homo sapiens, GI217035150, Length=453, Percent_Identity=41.7218543046358, Blast_Score=330, Evalue=3e-90, Organism=Homo sapiens, GI156104880, Length=239, Percent_Identity=37.6569037656904, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI50541956, Length=220, Percent_Identity=40.4545454545455, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI50541954, Length=220, Percent_Identity=40.4545454545455, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI50541952, Length=220, Percent_Identity=40.4545454545455, Blast_Score=162, Evalue=7e-40, Organism=Homo sapiens, GI50541948, Length=220, Percent_Identity=40.4545454545455, Blast_Score=162, Evalue=7e-40, Organism=Escherichia coli, GI1788855, Length=483, Percent_Identity=58.592132505176, Blast_Score=513, Evalue=1e-146, Organism=Escherichia coli, GI1786293, Length=240, Percent_Identity=37.5, Blast_Score=156, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71994385, Length=470, Percent_Identity=38.5106382978723, Blast_Score=294, Evalue=8e-80, Organism=Caenorhabditis elegans, GI71994389, Length=419, Percent_Identity=40.5727923627685, Blast_Score=279, Evalue=3e-75, Organism=Caenorhabditis elegans, GI17560440, Length=301, Percent_Identity=34.8837209302326, Blast_Score=176, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6322012, Length=464, Percent_Identity=41.5948275862069, Blast_Score=344, Evalue=2e-95, Organism=Saccharomyces cerevisiae, GI6323585, Length=455, Percent_Identity=41.0989010989011, Blast_Score=337, Evalue=2e-93, Organism=Saccharomyces cerevisiae, GI6323464, Length=455, Percent_Identity=41.3186813186813, Blast_Score=332, Evalue=7e-92, Organism=Saccharomyces cerevisiae, GI6319352, Length=346, Percent_Identity=40.7514450867052, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6319353, Length=114, Percent_Identity=40.3508771929825, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641071, Length=484, Percent_Identity=41.9421487603306, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI24641073, Length=484, Percent_Identity=41.9421487603306, Blast_Score=352, Evalue=3e-97, Organism=Drosophila melanogaster, GI28571163, Length=439, Percent_Identity=42.5968109339408, Blast_Score=316, Evalue=2e-86,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52429; Mature: 52429
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAKFGPEALTFDDVLLVPAHSEVLPRDVDVSTRLTRKIRLNIPLVSAAMDTVTEARMAI CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHH AMAREGGIGIIHKSMSIERQAEEVDKVKRSEHGIIVDPVFVHPDDMIETALQLMARYRIS HHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCC GTPVVERGTHKLVGILTNRDLRFEDNWNQPVGNVMTRENLITAPVGTTLEQAREILRHAK CCCEEECCCCEEEEEEECCCEEECCCCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHHCC VEKLPLVDEHGVLKGLITIKDIEKAKKYPNSAKDEHGRLLCGAAVGVSDDLMERAGALVD HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHCCCHHH AGVDVLVLDSAHGHSRGIMEALRKVKRNFPQVQVIAGNVATYEGTRDLIEAGADAVKVGI CCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCHHHHHHCCCCEEEEEC GPGSICTTRVVAGIGVPQITAIYESARAADEYDVPIIADGGIKYSGDITKAIAAGASAVM CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCEEECCCHHHHHHCCCHHHH IGSLFAGTDESPGEMEIYQGRSFKVYRGMGSLGAMKQGSGDRYFQEGAPKLVPEGIEGRV HHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC PYRGPLAEMVFQLVGGLRAGMGYCGTRTIEELRKNGKFCRITAAGLRESHPHDVMITKEA CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECC PNYSAT CCCCCC >Mature Secondary Structure MDAKFGPEALTFDDVLLVPAHSEVLPRDVDVSTRLTRKIRLNIPLVSAAMDTVTEARMAI CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHEEEEEEECCCHHHHHHHHHHHHHHHH AMAREGGIGIIHKSMSIERQAEEVDKVKRSEHGIIVDPVFVHPDDMIETALQLMARYRIS HHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCC GTPVVERGTHKLVGILTNRDLRFEDNWNQPVGNVMTRENLITAPVGTTLEQAREILRHAK CCCEEECCCCEEEEEEECCCEEECCCCCCCHHHHHHHCCEEECCCCHHHHHHHHHHHHCC VEKLPLVDEHGVLKGLITIKDIEKAKKYPNSAKDEHGRLLCGAAVGVSDDLMERAGALVD HHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHCCCHHH AGVDVLVLDSAHGHSRGIMEALRKVKRNFPQVQVIAGNVATYEGTRDLIEAGADAVKVGI CCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCHHHHHHCCCCEEEEEC GPGSICTTRVVAGIGVPQITAIYESARAADEYDVPIIADGGIKYSGDITKAIAAGASAVM CCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEECCCEEECCCHHHHHHCCCHHHH IGSLFAGTDESPGEMEIYQGRSFKVYRGMGSLGAMKQGSGDRYFQEGAPKLVPEGIEGRV HHHHHCCCCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC PYRGPLAEMVFQLVGGLRAGMGYCGTRTIEELRKNGKFCRITAAGLRESHPHDVMITKEA CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECC PNYSAT CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]