Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is ymcC [H]

Identifier: 51894046

GI number: 51894046

Start: 3137646

End: 3138200

Strand: Reverse

Name: ymcC [H]

Synonym: STH2910

Alternate gene names: 51894046

Gene position: 3138200-3137646 (Counterclockwise)

Preceding gene: 51894048

Following gene: 51894044

Centisome position: 88.0

GC content: 65.41

Gene sequence:

>555_bases
TTGAGTCCCATCGCCTACCTGATCGTGGGCATCGAGATCGGTTTCTGGGTTCTCGTGATCTCGGGCCTGGCCGTGCGCTA
CGTGCTGAACCGGCCGCGCCTGAGTGCCCTCCTGCTGGCCATGACGCTGGTTTTGGACGGCATCCTGCTGGTGGTCACCA
CGCGCGACGTGCTGGTGAACGGCGCCACGCCGACCCTCGCCCACGGCATCGCCGCCTTCTACCTGAGCGTCTCGGTCACG
TTCGGCAAGCGCATCGTCCGCTGGGCCGACGAACGGTTCCAATACTACGTCCTGAAGCGCGGTCCCCGGCCCCGTCAGCT
CTACGGTTATGAGCACGCCCGCTACAACTTCAGCGGCAGCATGCTCTACCTGCTGGCGTACCTGCTGGGCGGGGGCTACC
TCGGCCTGCTCATCTACCTGATCGGCGACCTGGGCCGGAGCGTCGCACTGCTGCGGGTGCTGGGGTTCTGGACGGTGTCC
CTCGTTATCGACATGGCCATTTCCGTTTCGTACTTCATCTGGCCCCGGCGGCCCGAGTCAGAGTCCGCGGACTGA

Upstream 100 bases:

>100_bases
GGGCATGGTCTCATTATAGCACAGATGTATTGCAAAAACCAGCGACCCGTGCTACACTTCGTCTTTGGCAATACACTTGT
GCGAAAAAGGAGTGCCCGCC

Downstream 100 bases:

>100_bases
GGATCGGGGCTGAGCCGGGTGCAAGGGCCCAGTCTCCACGTGACTGGCGCGTGCCCGGATCGTTGCCGGACCGAACGATG
AACGACACCGGATGATGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSPIAYLIVGIEIGFWVLVISGLAVRYVLNRPRLSALLLAMTLVLDGILLVVTTRDVLVNGATPTLAHGIAAFYLSVSVT
FGKRIVRWADERFQYYVLKRGPRPRQLYGYEHARYNFSGSMLYLLAYLLGGGYLGLLIYLIGDLGRSVALLRVLGFWTVS
LVIDMAISVSYFIWPRRPESESAD

Sequences:

>Translated_184_residues
MSPIAYLIVGIEIGFWVLVISGLAVRYVLNRPRLSALLLAMTLVLDGILLVVTTRDVLVNGATPTLAHGIAAFYLSVSVT
FGKRIVRWADERFQYYVLKRGPRPRQLYGYEHARYNFSGSMLYLLAYLLGGGYLGLLIYLIGDLGRSVALLRVLGFWTVS
LVIDMAISVSYFIWPRRPESESAD
>Mature_183_residues
SPIAYLIVGIEIGFWVLVISGLAVRYVLNRPRLSALLLAMTLVLDGILLVVTTRDVLVNGATPTLAHGIAAFYLSVSVTF
GKRIVRWADERFQYYVLKRGPRPRQLYGYEHARYNFSGSMLYLLAYLLGGGYLGLLIYLIGDLGRSVALLRVLGFWTVSL
VIDMAISVSYFIWPRRPESESAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20595; Mature: 20464

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPIAYLIVGIEIGFWVLVISGLAVRYVLNRPRLSALLLAMTLVLDGILLVVTTRDVLVN
CCCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEEEEHHHHEEE
GATPTLAHGIAAFYLSVSVTFGKRIVRWADERFQYYVLKRGPRPRQLYGYEHARYNFSGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCCCCEECCCCH
MLYLLAYLLGGGYLGLLIYLIGDLGRSVALLRVLGFWTVSLVIDMAISVSYFIWPRRPES
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
ESAD
CCCC
>Mature Secondary Structure 
SPIAYLIVGIEIGFWVLVISGLAVRYVLNRPRLSALLLAMTLVLDGILLVVTTRDVLVN
CCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHEEEEHHHHEEE
GATPTLAHGIAAFYLSVSVTFGKRIVRWADERFQYYVLKRGPRPRQLYGYEHARYNFSGS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHCCCCCCEECCCCH
MLYLLAYLLGGGYLGLLIYLIGDLGRSVALLRVLGFWTVSLVIDMAISVSYFIWPRRPES
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
ESAD
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]