| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894044
Identifier: 51894044
GI number: 51894044
Start: 3135407
End: 3136423
Strand: Reverse
Name: 51894044
Synonym: STH2908
Alternate gene names: NA
Gene position: 3136423-3135407 (Counterclockwise)
Preceding gene: 51894046
Following gene: 51894042
Centisome position: 87.95
GC content: 62.14
Gene sequence:
>1017_bases ATGGTGGCAAGACCAGTGTACCACGCCGTGGCCCTGATTCTCCAGCACTTGCATCGCCTCCTGGACGAAGTTGCTGCCGA ACGGCGGGGTCGCAAGCCGAGGAACCAACCCAAGACCGGGCGCCCGCGCTTGTACTCGACCCCCTCGCTGCTCCTGTTCC GAATTGCAGCGGATTTGCTGGGCTGGTCGCTGCGCAAAACGCTCAACTATGCGGAACAGGAAGCGGGAGCATGGCTCCGT AAGGCCCTTGGCTGGGAGCAGGTGCCGCATCTGTCTGTGGTCTGCCGCCGCCTGCACGGCGATGACGTCCGGCGGCTGCG GACCCGCCTCTGGCGCAAGCTGCGCCGGCGCTCCCTGCGGCAAGGAGACCTTCGGGTCTTGACCATCGACATGACGGACT TACCCGTACCCCTCCGGAGGAAGGACCCGGACGCAACCTGGGGAGCGACCTCGAAGGGAAAGTTCTTTGGCTACAAGTTG CACCTGGTCATCAGCCGGACCGGTTTCCCGTTGGCCTTCCGGGTCACCCCGGCCGCCATCCATGAGATGAGGCCTGCAGT CTCGCTCTTTGCTGAGGTGGTCAAGCTGGCGGACCAGAAGCAAAAGGCCGAGTTGACCTACGGGGTGGGAGATAGCGCCT ACGACAGCGAGAACCTGTACAAGTTCTGGGCGGATGTGTGTTGCGGGCACTTCCTGTGCGCTCCCAACCGGCGGGGCACG CCGGAGGGGGAAGAAGTGCGGGCGCAGGGGCCTTATCGGAAAGCGGCGCTGGAGTTCTGGAAAACCGACCTGGCACGGAG GATTTATGGCAAGCACCGGTCGCTGATCGAATCGGTGAACGCGCAACTGAAGGACCTGTCCAATCCGTTCCAGGTCGGAC AGATTCCGGGATGGATTCGGGGTTTGAGAGGCGTGTCGGATTGGGTGTTCTGGCGGATTCTCGCCTTCTCATCCATTCTC TACGCAAACCGTTTGCGTGGTTCTTGTTCACGCAAGCTCTCACGCTTCATTGCATGA
Upstream 100 bases:
>100_bases AAATCCCCGTAAGCCAGTGAAACCTGGAGCATAGAACAGGAAAGCCACCATATCCCGCGAATTGGTTGGATTAGCCGCCA AAACAACCAAAACCGCGGGG
Downstream 100 bases:
>100_bases GTTTCGCGACACCCCCTTTCCACAGTGCATCCGGCACGCTGAACTCCACTGGTTTCATGCCGCTCACCGATTAGGGGATT TCTGCCATGGCGACCCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLLGWSLRKTLNYAEQEAGAWLR KALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLRQGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKL HLVISRTGFPLAFRVTPAAIHEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIRGLRGVSDWVFWRILAFSSIL YANRLRGSCSRKLSRFIA
Sequences:
>Translated_338_residues MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLLGWSLRKTLNYAEQEAGAWLR KALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLRQGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKL HLVISRTGFPLAFRVTPAAIHEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIRGLRGVSDWVFWRILAFSSIL YANRLRGSCSRKLSRFIA >Mature_338_residues MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLLGWSLRKTLNYAEQEAGAWLR KALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLRQGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKL HLVISRTGFPLAFRVTPAAIHEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIRGLRGVSDWVFWRILAFSSIL YANRLRGSCSRKLSRFIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38834; Mature: 38834
Theoretical pI: Translated: 11.19; Mature: 11.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GWSLRKTLNYAEQEAGAWLRKALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLR HHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC QGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKLHLVISRTGFPLAFRVTPAAI CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECHHHH HEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCC PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIR CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHH GLRGVSDWVFWRILAFSSILYANRLRGSCSRKLSRFIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GWSLRKTLNYAEQEAGAWLRKALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLR HHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC QGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKLHLVISRTGFPLAFRVTPAAI CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECHHHH HEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCC PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIR CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHH GLRGVSDWVFWRILAFSSILYANRLRGSCSRKLSRFIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA