Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894044

Identifier: 51894044

GI number: 51894044

Start: 3135407

End: 3136423

Strand: Reverse

Name: 51894044

Synonym: STH2908

Alternate gene names: NA

Gene position: 3136423-3135407 (Counterclockwise)

Preceding gene: 51894046

Following gene: 51894042

Centisome position: 87.95

GC content: 62.14

Gene sequence:

>1017_bases
ATGGTGGCAAGACCAGTGTACCACGCCGTGGCCCTGATTCTCCAGCACTTGCATCGCCTCCTGGACGAAGTTGCTGCCGA
ACGGCGGGGTCGCAAGCCGAGGAACCAACCCAAGACCGGGCGCCCGCGCTTGTACTCGACCCCCTCGCTGCTCCTGTTCC
GAATTGCAGCGGATTTGCTGGGCTGGTCGCTGCGCAAAACGCTCAACTATGCGGAACAGGAAGCGGGAGCATGGCTCCGT
AAGGCCCTTGGCTGGGAGCAGGTGCCGCATCTGTCTGTGGTCTGCCGCCGCCTGCACGGCGATGACGTCCGGCGGCTGCG
GACCCGCCTCTGGCGCAAGCTGCGCCGGCGCTCCCTGCGGCAAGGAGACCTTCGGGTCTTGACCATCGACATGACGGACT
TACCCGTACCCCTCCGGAGGAAGGACCCGGACGCAACCTGGGGAGCGACCTCGAAGGGAAAGTTCTTTGGCTACAAGTTG
CACCTGGTCATCAGCCGGACCGGTTTCCCGTTGGCCTTCCGGGTCACCCCGGCCGCCATCCATGAGATGAGGCCTGCAGT
CTCGCTCTTTGCTGAGGTGGTCAAGCTGGCGGACCAGAAGCAAAAGGCCGAGTTGACCTACGGGGTGGGAGATAGCGCCT
ACGACAGCGAGAACCTGTACAAGTTCTGGGCGGATGTGTGTTGCGGGCACTTCCTGTGCGCTCCCAACCGGCGGGGCACG
CCGGAGGGGGAAGAAGTGCGGGCGCAGGGGCCTTATCGGAAAGCGGCGCTGGAGTTCTGGAAAACCGACCTGGCACGGAG
GATTTATGGCAAGCACCGGTCGCTGATCGAATCGGTGAACGCGCAACTGAAGGACCTGTCCAATCCGTTCCAGGTCGGAC
AGATTCCGGGATGGATTCGGGGTTTGAGAGGCGTGTCGGATTGGGTGTTCTGGCGGATTCTCGCCTTCTCATCCATTCTC
TACGCAAACCGTTTGCGTGGTTCTTGTTCACGCAAGCTCTCACGCTTCATTGCATGA

Upstream 100 bases:

>100_bases
AAATCCCCGTAAGCCAGTGAAACCTGGAGCATAGAACAGGAAAGCCACCATATCCCGCGAATTGGTTGGATTAGCCGCCA
AAACAACCAAAACCGCGGGG

Downstream 100 bases:

>100_bases
GTTTCGCGACACCCCCTTTCCACAGTGCATCCGGCACGCTGAACTCCACTGGTTTCATGCCGCTCACCGATTAGGGGATT
TCTGCCATGGCGACCCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLLGWSLRKTLNYAEQEAGAWLR
KALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLRQGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKL
HLVISRTGFPLAFRVTPAAIHEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT
PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIRGLRGVSDWVFWRILAFSSIL
YANRLRGSCSRKLSRFIA

Sequences:

>Translated_338_residues
MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLLGWSLRKTLNYAEQEAGAWLR
KALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLRQGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKL
HLVISRTGFPLAFRVTPAAIHEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT
PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIRGLRGVSDWVFWRILAFSSIL
YANRLRGSCSRKLSRFIA
>Mature_338_residues
MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLLGWSLRKTLNYAEQEAGAWLR
KALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLRQGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKL
HLVISRTGFPLAFRVTPAAIHEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT
PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIRGLRGVSDWVFWRILAFSSIL
YANRLRGSCSRKLSRFIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38834; Mature: 38834

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GWSLRKTLNYAEQEAGAWLRKALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLR
HHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
QGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKLHLVISRTGFPLAFRVTPAAI
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECHHHH
HEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCC
PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIR
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHH
GLRGVSDWVFWRILAFSSILYANRLRGSCSRKLSRFIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVARPVYHAVALILQHLHRLLDEVAAERRGRKPRNQPKTGRPRLYSTPSLLLFRIAADLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GWSLRKTLNYAEQEAGAWLRKALGWEQVPHLSVVCRRLHGDDVRRLRTRLWRKLRRRSLR
HHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
QGDLRVLTIDMTDLPVPLRRKDPDATWGATSKGKFFGYKLHLVISRTGFPLAFRVTPAAI
CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECHHHH
HEMRPAVSLFAEVVKLADQKQKAELTYGVGDSAYDSENLYKFWADVCCGHFLCAPNRRGT
HHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHEECCCCCCC
PEGEEVRAQGPYRKAALEFWKTDLARRIYGKHRSLIESVNAQLKDLSNPFQVGQIPGWIR
CCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHH
GLRGVSDWVFWRILAFSSILYANRLRGSCSRKLSRFIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA