| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51894009
Identifier: 51894009
GI number: 51894009
Start: 3096313
End: 3096819
Strand: Reverse
Name: 51894009
Synonym: STH2873
Alternate gene names: NA
Gene position: 3096819-3096313 (Counterclockwise)
Preceding gene: 51894010
Following gene: 51894008
Centisome position: 86.84
GC content: 69.82
Gene sequence:
>507_bases GTGTACACCTTGCGGTACCCCTACCATCTGCCCTACTTCGGCGGCGGGTTGGTGGCGGCGCTTCTGGCCTGGGGCTTCCT GCAGATGGCCGTCCTGCTGGAGCCTGAGGTGAAGCCGGGCGTCCAGTTCATCGTGGGCGCCGGCTTCGCGGTGGTCTCCT GGGCGCACATCTCCGTGGTGGCCTGCCTCACCATCATCCCCCAGGTGGTGCGGGCCGGCCGGCTGCTGGACACCTTCGAC CCCATCTGGATCCTGGGCGGTCTGTCGCCCCTGGTCGTGCCGGCGGCGGCGGTCGCTCTTCGCATCGCCGGCCGGCCGCT GCTGCCGTCGCTGGCCGCCGCGCTCTTCCGTTTCTCCGTGCCGCTGGGCTTCCTCAGCCTGATCCCCCGCTGGCTGCATC TGCCCAAGCAGTTCCGCTGGCTCTTCCTGTTCACCGGGGTGATGTTCCTGGTGCTGGACGGGCTGGGGTTCGACTTCCGC CCAAAGGGCCGGGCACGGTCGGCCTAG
Upstream 100 bases:
>100_bases ACAGCGTGAACTTCCGGCGGGAGGGGGTGGCGCCTTGGCCAGGGTATACTACCGGCTGGTCCTGACCGCGCTCTGCGCCC TGGCGGCCTACGTCACCCCG
Downstream 100 bases:
>100_bases CCTCTCCGGGTCAGGCCCGCCGACCATGGGAGGAGGCCCAACGGTCTACGGGAATAGGGCCTAGTGCTCAATTGACAGAC AATTTTCAAACAGATAACAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVVACLTIIPQVVRAGRLLDTFD PIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSVPLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFR PKGRARSA
Sequences:
>Translated_168_residues MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVVACLTIIPQVVRAGRLLDTFD PIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSVPLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFR PKGRARSA >Mature_168_residues MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVVACLTIIPQVVRAGRLLDTFD PIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSVPLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFR PKGRARSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18413; Mature: 18413
Theoretical pI: Translated: 11.08; Mature: 11.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVV CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHH ACLTIIPQVVRAGRLLDTFDPIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSV HHHHHHHHHHHHCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH PLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFRPKGRARSA HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVV CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHH ACLTIIPQVVRAGRLLDTFDPIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSV HHHHHHHHHHHHCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH PLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFRPKGRARSA HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA