Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51894009

Identifier: 51894009

GI number: 51894009

Start: 3096313

End: 3096819

Strand: Reverse

Name: 51894009

Synonym: STH2873

Alternate gene names: NA

Gene position: 3096819-3096313 (Counterclockwise)

Preceding gene: 51894010

Following gene: 51894008

Centisome position: 86.84

GC content: 69.82

Gene sequence:

>507_bases
GTGTACACCTTGCGGTACCCCTACCATCTGCCCTACTTCGGCGGCGGGTTGGTGGCGGCGCTTCTGGCCTGGGGCTTCCT
GCAGATGGCCGTCCTGCTGGAGCCTGAGGTGAAGCCGGGCGTCCAGTTCATCGTGGGCGCCGGCTTCGCGGTGGTCTCCT
GGGCGCACATCTCCGTGGTGGCCTGCCTCACCATCATCCCCCAGGTGGTGCGGGCCGGCCGGCTGCTGGACACCTTCGAC
CCCATCTGGATCCTGGGCGGTCTGTCGCCCCTGGTCGTGCCGGCGGCGGCGGTCGCTCTTCGCATCGCCGGCCGGCCGCT
GCTGCCGTCGCTGGCCGCCGCGCTCTTCCGTTTCTCCGTGCCGCTGGGCTTCCTCAGCCTGATCCCCCGCTGGCTGCATC
TGCCCAAGCAGTTCCGCTGGCTCTTCCTGTTCACCGGGGTGATGTTCCTGGTGCTGGACGGGCTGGGGTTCGACTTCCGC
CCAAAGGGCCGGGCACGGTCGGCCTAG

Upstream 100 bases:

>100_bases
ACAGCGTGAACTTCCGGCGGGAGGGGGTGGCGCCTTGGCCAGGGTATACTACCGGCTGGTCCTGACCGCGCTCTGCGCCC
TGGCGGCCTACGTCACCCCG

Downstream 100 bases:

>100_bases
CCTCTCCGGGTCAGGCCCGCCGACCATGGGAGGAGGCCCAACGGTCTACGGGAATAGGGCCTAGTGCTCAATTGACAGAC
AATTTTCAAACAGATAACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVVACLTIIPQVVRAGRLLDTFD
PIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSVPLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFR
PKGRARSA

Sequences:

>Translated_168_residues
MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVVACLTIIPQVVRAGRLLDTFD
PIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSVPLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFR
PKGRARSA
>Mature_168_residues
MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVVACLTIIPQVVRAGRLLDTFD
PIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSVPLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFR
PKGRARSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18413; Mature: 18413

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVV
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHH
ACLTIIPQVVRAGRLLDTFDPIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSV
HHHHHHHHHHHHCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
PLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFRPKGRARSA
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYTLRYPYHLPYFGGGLVAALLAWGFLQMAVLLEPEVKPGVQFIVGAGFAVVSWAHISVV
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHH
ACLTIIPQVVRAGRLLDTFDPIWILGGLSPLVVPAAAVALRIAGRPLLPSLAAALFRFSV
HHHHHHHHHHHHCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
PLGFLSLIPRWLHLPKQFRWLFLFTGVMFLVLDGLGFDFRPKGRARSA
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA