| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is argG
Identifier: 51894010
GI number: 51894010
Start: 3097033
End: 3098238
Strand: Reverse
Name: argG
Synonym: STH2874
Alternate gene names: 51894010
Gene position: 3098238-3097033 (Counterclockwise)
Preceding gene: 51894011
Following gene: 51894009
Centisome position: 86.88
GC content: 65.59
Gene sequence:
>1206_bases ATGGCGAAGAAGAAGTGCGTGCTGGCCTACTCAGGCGGGCTGGATACCTCGGTGGCGATCCACTGGATCAAGGAGAACTA CGACGCCGATGTGGTCGCGCTGGCGGTGGACGTGGGCGCCAACGACAAGGACCTGGAGTTCATCCGGCAGAAGGCGCTTT CCATCGGCGCCGTGAAGAGCTACGTCTACGATGCCAGGAAAGAGTTCGCCTACGACTTCATCCTGCCGACGCTCCAGGCC AACGCCTGTTACGAGTCCAAGTACTACCTCTCGGCGGCGCTTTCCCGGCCGCTGATCGCGAAGCTGCTGGTCCAGATCGC CGAGGAGGAAGGGGCCGACTTCGTCGCCCACGGCTGCACGGGCAAGGGCAATGACCAGGTGCGGTTCGAGGTCTCCGTGG CCGCCCTCAACCCCAACCTGCAGGTGCTCGCCCCGGTGCGGGAGTGGGGATGGAGCCGGGAGGAGGAGATCGACTACGCC CAGAAACATGGCATCCCGGTCCCGGTGGGCAAGGAGAACCCGTTCTCCATCGACGTGAACCTGTGGGGCCGCTCCTGCGA GGCCGGCGTCCTGGAGGACCCGTGGGCGGAGGCGCCGGAGGAGGCCTTCGAGTGGACCGTGAATCCGAAGGATGCCCCCG ACGAGCCCGAGTACGTGGAGATCGGCTTCGAGCAGGGCGTGCCGGTCTCGTTGAACGGCGAGGCGCTGGACCTGGTGACC CTGATCGAGCGGCTGCACGCCATCGCCGGCCGCCACGGGGTGGGCCGCATCGACCACGTGGAGAACCGACTGGTCGGCAT CAAGTCCCGGGAGGTGTACGAGATGCCGGCGGCGGCGGTGCTCACCCTGGCGCACAAGGAGCTGGAGACCATCACCCTGC CCCGGGAGCTGCACCACTTCAAGCTGGGCCTGGAGCAGAAGTACGCCGAACTGGTCTACAACGGCCTCTGGTTCCACCCG CTGAAGGAGGCCCTGGACGCTTTCATCAAGAAGTCCCAGGAGACGGTGACCGGCACGGTGCGGGTGAGACTCTTCAAGGG CTCGGCCTTCTGCGTGGGCCGGACTTCGCCCTACACGCTCTACTCCTACGACCTGGCCACCTACGACAAGGCGGACAAGT TCGACCACAAGGCGGCCAAGGGGTTCATCGACATCTTCGGCCTGCCCACCAAGGTCTACGCCGCCGTGCAGAAGAGCAAG GCCTGA
Upstream 100 bases:
>100_bases TCTAAATCTATTCACCCCTATTGCATACTTATTCACCTAGGAGTATAATCATGCACCAAGAGGCCCGGGGCGCCGGGCGA GGACGAGGAGGCTCCGATCG
Downstream 100 bases:
>100_bases GACGCATACGGATGACTGGCGACCGCCCGGACATCGGACCCGGGCGGTCGGTTGTCTGCGGAGGACCCGCATGCCTGCCG GGGGCAGGAAAGCCGCTTCC
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MAKKKCVLAYSGGLDTSVAIHWIKENYDADVVALAVDVGANDKDLEFIRQKALSIGAVKSYVYDARKEFAYDFILPTLQA NACYESKYYLSAALSRPLIAKLLVQIAEEEGADFVAHGCTGKGNDQVRFEVSVAALNPNLQVLAPVREWGWSREEEIDYA QKHGIPVPVGKENPFSIDVNLWGRSCEAGVLEDPWAEAPEEAFEWTVNPKDAPDEPEYVEIGFEQGVPVSLNGEALDLVT LIERLHAIAGRHGVGRIDHVENRLVGIKSREVYEMPAAAVLTLAHKELETITLPRELHHFKLGLEQKYAELVYNGLWFHP LKEALDAFIKKSQETVTGTVRVRLFKGSAFCVGRTSPYTLYSYDLATYDKADKFDHKAAKGFIDIFGLPTKVYAAVQKSK A
Sequences:
>Translated_401_residues MAKKKCVLAYSGGLDTSVAIHWIKENYDADVVALAVDVGANDKDLEFIRQKALSIGAVKSYVYDARKEFAYDFILPTLQA NACYESKYYLSAALSRPLIAKLLVQIAEEEGADFVAHGCTGKGNDQVRFEVSVAALNPNLQVLAPVREWGWSREEEIDYA QKHGIPVPVGKENPFSIDVNLWGRSCEAGVLEDPWAEAPEEAFEWTVNPKDAPDEPEYVEIGFEQGVPVSLNGEALDLVT LIERLHAIAGRHGVGRIDHVENRLVGIKSREVYEMPAAAVLTLAHKELETITLPRELHHFKLGLEQKYAELVYNGLWFHP LKEALDAFIKKSQETVTGTVRVRLFKGSAFCVGRTSPYTLYSYDLATYDKADKFDHKAAKGFIDIFGLPTKVYAAVQKSK A >Mature_400_residues AKKKCVLAYSGGLDTSVAIHWIKENYDADVVALAVDVGANDKDLEFIRQKALSIGAVKSYVYDARKEFAYDFILPTLQAN ACYESKYYLSAALSRPLIAKLLVQIAEEEGADFVAHGCTGKGNDQVRFEVSVAALNPNLQVLAPVREWGWSREEEIDYAQ KHGIPVPVGKENPFSIDVNLWGRSCEAGVLEDPWAEAPEEAFEWTVNPKDAPDEPEYVEIGFEQGVPVSLNGEALDLVTL IERLHAIAGRHGVGRIDHVENRLVGIKSREVYEMPAAAVLTLAHKELETITLPRELHHFKLGLEQKYAELVYNGLWFHPL KEALDAFIKKSQETVTGTVRVRLFKGSAFCVGRTSPYTLYSYDLATYDKADKFDHKAAKGFIDIFGLPTKVYAAVQKSKA
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily
Homologues:
Organism=Homo sapiens, GI53759107, Length=407, Percent_Identity=44.2260442260442, Blast_Score=320, Evalue=2e-87, Organism=Homo sapiens, GI16950633, Length=407, Percent_Identity=44.2260442260442, Blast_Score=320, Evalue=2e-87, Organism=Escherichia coli, GI1789563, Length=400, Percent_Identity=29.25, Blast_Score=134, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6324514, Length=417, Percent_Identity=40.2877697841727, Blast_Score=291, Evalue=1e-79, Organism=Drosophila melanogaster, GI21358151, Length=403, Percent_Identity=39.2059553349876, Blast_Score=270, Evalue=1e-72,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): ASSY_SYMTH (Q67KE1)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076701.1 - ProteinModelPortal: Q67KE1 - SMR: Q67KE1 - GeneID: 2982529 - GenomeReviews: AP006840_GR - KEGG: sth:STH2874 - NMPDR: fig|292459.1.peg.2749 - HOGENOM: HBG335267 - OMA: VAVDVGQ - ProtClustDB: CLSK2765221 - BioCyc: STHE292459:STH2874-MONOMER - BRENDA: 6.3.4.5 - GO: GO:0005737 - HAMAP: MF_00005 - InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR11587 - TIGRFAMs: TIGR00032
Pfam domain/function: PF00764 Arginosuc_synth
EC number: =6.3.4.5
Molecular weight: Translated: 44594; Mature: 44463
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1; PS00565 ARGININOSUCCIN_SYN_2
Important sites: BINDING 88-88 BINDING 118-118 BINDING 120-120 BINDING 124-124 BINDING 124-124 BINDING 125-125 BINDING 128-128 BINDING 176-176 BINDING 185-185 BINDING 261-261 BINDING 273-273
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKKCVLAYSGGLDTSVAIHWIKENYDADVVALAVDVGANDKDLEFIRQKALSIGAVKS CCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH YVYDARKEFAYDFILPTLQANACYESKYYLSAALSRPLIAKLLVQIAEEEGADFVAHGCT HHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCC GKGNDQVRFEVSVAALNPNLQVLAPVREWGWSREEEIDYAQKHGIPVPVGKENPFSIDVN CCCCCEEEEEEEEEEECCCCEEEEEHHHCCCCCHHHCCHHHHCCCCCCCCCCCCEEEEEE LWGRSCEAGVLEDPWAEAPEEAFEWTVNPKDAPDEPEYVEIGFEQGVPVSLNGEALDLVT ECCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHH LIERLHAIAGRHGVGRIDHVENRLVGIKSREVYEMPAAAVLTLAHKELETITLPRELHHF HHHHHHHHHCCCCCCCHHHHHHHEECCCCCHHHHCCHHHHHHHHHHHHHEEECCHHHHHH KLGLEQKYAELVYNGLWFHPLKEALDAFIKKSQETVTGTVRVRLFKGSAFCVGRTSPYTL HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEECCCCCEE YSYDLATYDKADKFDHKAAKGFIDIFGLPTKVYAAVQKSKA EEECCCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHCCC >Mature Secondary Structure AKKKCVLAYSGGLDTSVAIHWIKENYDADVVALAVDVGANDKDLEFIRQKALSIGAVKS CCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH YVYDARKEFAYDFILPTLQANACYESKYYLSAALSRPLIAKLLVQIAEEEGADFVAHGCT HHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCC GKGNDQVRFEVSVAALNPNLQVLAPVREWGWSREEEIDYAQKHGIPVPVGKENPFSIDVN CCCCCEEEEEEEEEEECCCCEEEEEHHHCCCCCHHHCCHHHHCCCCCCCCCCCCEEEEEE LWGRSCEAGVLEDPWAEAPEEAFEWTVNPKDAPDEPEYVEIGFEQGVPVSLNGEALDLVT ECCCCCCCCCCCCCCCCCCHHHHEEECCCCCCCCCCCEEEEECCCCCCEEECCCHHHHHH LIERLHAIAGRHGVGRIDHVENRLVGIKSREVYEMPAAAVLTLAHKELETITLPRELHHF HHHHHHHHHCCCCCCCHHHHHHHEECCCCCHHHHCCHHHHHHHHHHHHHEEECCHHHHHH KLGLEQKYAELVYNGLWFHPLKEALDAFIKKSQETVTGTVRVRLFKGSAFCVGRTSPYTL HCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEEECCCCCEE YSYDLATYDKADKFDHKAAKGFIDIFGLPTKVYAAVQKSKA EEECCCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA