| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is trxA [H]
Identifier: 51894007
GI number: 51894007
Start: 3094334
End: 3094654
Strand: Reverse
Name: trxA [H]
Synonym: STH2871
Alternate gene names: 51894007
Gene position: 3094654-3094334 (Counterclockwise)
Preceding gene: 51894008
Following gene: 51894006
Centisome position: 86.78
GC content: 67.29
Gene sequence:
>321_bases ATGCTGGAGGTCAACAAGGAGAACTTCGAACAGGAGGTGTTGCAGGCGTCCGGCCCGGTGGTGGTCGACTGGTGGAGCCC CAAGTGCGACCCGTGCATGGAGCTGCTGCCTGAGGTGGAGCGGCTGGCCGAAACGTATGGCGACCGGGTGAAGTTCTGCA AGGTCAACGTGCTGGAGAACCGGCGGCTGGCGATCAGCCAGCGGGTGCTCGGGCTGCCGACGTTCCTCTTCTTCCGGGAC GGGGAGAAGGTGGCCGAGCTGGCCGGGCCCGAGGCGTGCACGGCGGAGGCCATCGAGGCCGAGCTGCAGCGGCTGGTGTG A
Upstream 100 bases:
>100_bases CAAGGGCATTCCCCTGGCCACCCTCACCGAGGACTTCAACCACCTGGAGGAGTGGGTGGTTGGACACTTGCCGGCCAGGA TCTGAGGAGGTGACCCATGG
Downstream 100 bases:
>100_bases GGAGGCGAAGGGCCATGAAGCTGGAACTGGGCCGCATCTACATCCGCGACGTGCGCTTCGGCGAGACCACCCGGGTGGAG GGCGGCGTCCTCACCGTGAA
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MLEVNKENFEQEVLQASGPVVVDWWSPKCDPCMELLPEVERLAETYGDRVKFCKVNVLENRRLAISQRVLGLPTFLFFRD GEKVAELAGPEACTAEAIEAELQRLV
Sequences:
>Translated_106_residues MLEVNKENFEQEVLQASGPVVVDWWSPKCDPCMELLPEVERLAETYGDRVKFCKVNVLENRRLAISQRVLGLPTFLFFRD GEKVAELAGPEACTAEAIEAELQRLV >Mature_106_residues MLEVNKENFEQEVLQASGPVVVDWWSPKCDPCMELLPEVERLAETYGDRVKFCKVNVLENRRLAISQRVLGLPTFLFFRD GEKVAELAGPEACTAEAIEAELQRLV
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI87082331, Length=89, Percent_Identity=30.3370786516854, Blast_Score=67, Evalue=3e-13, Organism=Escherichia coli, GI1788936, Length=92, Percent_Identity=33.695652173913, Blast_Score=60, Evalue=2e-11, Organism=Drosophila melanogaster, GI24639826, Length=78, Percent_Identity=37.1794871794872, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR012336 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 12024; Mature: 12024
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEVNKENFEQEVLQASGPVVVDWWSPKCDPCMELLPEVERLAETYGDRVKFCKVNVLEN CCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC RRLAISQRVLGLPTFLFFRDGEKVAELAGPEACTAEAIEAELQRLV CHHHHHHHHHCCCHHEEEECCHHHHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MLEVNKENFEQEVLQASGPVVVDWWSPKCDPCMELLPEVERLAETYGDRVKFCKVNVLEN CCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCC RRLAISQRVLGLPTFLFFRDGEKVAELAGPEACTAEAIEAELQRLV CHHHHHHHHHCCCHHEEEECCHHHHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11271425; 9534247 [H]