| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is purQ
Identifier: 51893994
GI number: 51893994
Start: 3079542
End: 3080249
Strand: Reverse
Name: purQ
Synonym: STH2856
Alternate gene names: 51893994
Gene position: 3080249-3079542 (Counterclockwise)
Preceding gene: 51893995
Following gene: 51893993
Centisome position: 86.37
GC content: 68.64
Gene sequence:
>708_bases ATGCGGTTCGGGATTCTCGTCTTTCCGGGCACCAACTGTGAGATGGAGACCTTCTACGTCCTGCGGGAGGTCGTCGGGGT GCAGGCCGACTACGTCTGGCACGAGGCAAGGGATCTCACACCCTACGACGCCGTGGTCATTCCCGGCGGCTTCACCTATG GCGACCGGGTGCGCAGCGGAGCCCTCGCCTGCCGCGCCCCGGTGATGGAGGCGGTGGCCGAGTTTGCGGCTCGGGGCGGG CTGGTGCTGGGCATCTGCAACGGCTTCCAGATCCTCACCGAGGCGGGCCTCCTGCCCGGCGGTTTCCGGCCCAACGCCCA CGGGCGTTACCGGTGCGGATGGAGCCGCGTGCGGGTGGAGAACGCGGCCACCCCGTTCACCCTGGCGTGCAGGCCGGGCC AGGTGCTGAAGATCCCCGTGAGCCACGGGATGGGCAACTACCAGGCCGATCCTGACACGCTGCGTGCCCTGAGCGAGAAC CAGCAGGTCCTGTTCCGCTACTGCACGCCGGAGGGGGCGGTTACCCCCGGGGCCAACCCCAACGGATCGGCGGAGAACAT TGCCGGGATCGTGAACCGGACCGGCAACGTCGCCGGCGTGATGCCCCACCCCGAGCGGGCGACGGAGCAGGTTCTGGGTT CTGCCGACGGGCGCCTTCTGTTTGCGTCCATGGTGCAACACCTGACGGGGAGGGTCATCCGTGTCTGA
Upstream 100 bases:
>100_bases GCTGCGCAAGGTGCTGGCGGAGACCGCTGCCGGCGCGGGCGGGGGCCGGCGATAGACGGAGCTGACGGAAGCGCGGGCTG GCGCAGAGGAGGCGGGGGCC
Downstream 100 bases:
>100_bases GATGCAGCAGCCCTGGAGTCTGGTGGGTCTCACGGAGGCGGAGTACCGCCGGGTGGTGGAGATCCTGGGGCGGGAGCCGA ACCCCACCGAACTGCACATG
Product: phosphoribosylformylglycinamidine synthase
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase I; FGAM synthase I
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MRFGILVFPGTNCEMETFYVLREVVGVQADYVWHEARDLTPYDAVVIPGGFTYGDRVRSGALACRAPVMEAVAEFAARGG LVLGICNGFQILTEAGLLPGGFRPNAHGRYRCGWSRVRVENAATPFTLACRPGQVLKIPVSHGMGNYQADPDTLRALSEN QQVLFRYCTPEGAVTPGANPNGSAENIAGIVNRTGNVAGVMPHPERATEQVLGSADGRLLFASMVQHLTGRVIRV
Sequences:
>Translated_235_residues MRFGILVFPGTNCEMETFYVLREVVGVQADYVWHEARDLTPYDAVVIPGGFTYGDRVRSGALACRAPVMEAVAEFAARGG LVLGICNGFQILTEAGLLPGGFRPNAHGRYRCGWSRVRVENAATPFTLACRPGQVLKIPVSHGMGNYQADPDTLRALSEN QQVLFRYCTPEGAVTPGANPNGSAENIAGIVNRTGNVAGVMPHPERATEQVLGSADGRLLFASMVQHLTGRVIRV >Mature_235_residues MRFGILVFPGTNCEMETFYVLREVVGVQADYVWHEARDLTPYDAVVIPGGFTYGDRVRSGALACRAPVMEAVAEFAARGG LVLGICNGFQILTEAGLLPGGFRPNAHGRYRCGWSRVRVENAATPFTLACRPGQVLKIPVSHGMGNYQADPDTLRALSEN QQVLFRYCTPEGAVTPGANPNGSAENIAGIVNRTGNVAGVMPHPERATEQVLGSADGRLLFASMVQHLTGRVIRV
Specific function: Unknown
COG id: COG0047
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Escherichia coli, GI48994899, Length=191, Percent_Identity=34.0314136125654, Blast_Score=77, Evalue=1e-15, Organism=Drosophila melanogaster, GI24582111, Length=232, Percent_Identity=28.0172413793103, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI24582109, Length=232, Percent_Identity=28.0172413793103, Blast_Score=74, Evalue=9e-14, Organism=Drosophila melanogaster, GI17137292, Length=232, Percent_Identity=28.0172413793103, Blast_Score=74, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURQ_SYMTH (Q67KF7)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076685.1 - ProteinModelPortal: Q67KF7 - SMR: Q67KF7 - GeneID: 2979755 - GenomeReviews: AP006840_GR - KEGG: sth:STH2856 - NMPDR: fig|292459.1.peg.2731 - HOGENOM: HBG302712 - OMA: FPGTNCD - BioCyc: STHE292459:STH2856-MONOMER - BRENDA: 6.3.5.3 - GO: GO:0005737 - HAMAP: MF_00421 - InterPro: IPR017926 - InterPro: IPR010075 - InterPro: IPR002818 - PIRSF: PIRSF001586 - TIGRFAMs: TIGR01737
Pfam domain/function: PF01965 DJ-1_PfpI
EC number: =6.3.5.3
Molecular weight: Translated: 25288; Mature: 25288
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: PS51273 GATASE_TYPE_1
Important sites: ACT_SITE 86-86 ACT_SITE 203-203 ACT_SITE 205-205
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFGILVFPGTNCEMETFYVLREVVGVQADYVWHEARDLTPYDAVVIPGGFTYGDRVRSG CCEEEEEECCCCCCHHHHHHHHHHHCCCHHHEEHHCCCCCCCCEEEECCCCCCHHHHHCC ALACRAPVMEAVAEFAARGGLVLGICNGFQILTEAGLLPGGFRPNAHGRYRCGWSRVRVE CHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEC NAATPFTLACRPGQVLKIPVSHGMGNYQADPDTLRALSENQQVLFRYCTPEGAVTPGANP CCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCC NGSAENIAGIVNRTGNVAGVMPHPERATEQVLGSADGRLLFASMVQHLTGRVIRV CCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCEECC >Mature Secondary Structure MRFGILVFPGTNCEMETFYVLREVVGVQADYVWHEARDLTPYDAVVIPGGFTYGDRVRSG CCEEEEEECCCCCCHHHHHHHHHHHCCCHHHEEHHCCCCCCCCEEEECCCCCCHHHHHCC ALACRAPVMEAVAEFAARGGLVLGICNGFQILTEAGLLPGGFRPNAHGRYRCGWSRVRVE CHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCEECCCEEEEEC NAATPFTLACRPGQVLKIPVSHGMGNYQADPDTLRALSENQQVLFRYCTPEGAVTPGANP CCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCC NGSAENIAGIVNRTGNVAGVMPHPERATEQVLGSADGRLLFASMVQHLTGRVIRV CCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA