| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is purL
Identifier: 51893993
GI number: 51893993
Start: 3077213
End: 3079549
Strand: Reverse
Name: purL
Synonym: STH2855
Alternate gene names: 51893993
Gene position: 3079549-3077213 (Counterclockwise)
Preceding gene: 51893994
Following gene: 51893992
Centisome position: 86.36
GC content: 71.89
Gene sequence:
>2337_bases GTGTCTGAGATGCAGCAGCCCTGGAGTCTGGTGGGTCTCACGGAGGCGGAGTACCGCCGGGTGGTGGAGATCCTGGGGCG GGAGCCGAACCCCACCGAACTGCACATGTTCGGCGTGATGTGGTCCGAACACTGCGCGTACAAGCACTCGAAGGCCGCGC TGCGGCGGCTTCCCACCCGCGGCGAGCACGTATTGCAGGGGCCGGGCGAGAACGCCGGCGTCGTCCGGATCGACGACGAC CTGGCCGTGGCCTTCAAGCTCGAGTCCCACAACCACCCCTCCTTCGTGGACCCCTTCAATGGCGCGGCCACGGGCGTGGG GGGCATCCTGCGGGACGTCTTCACCATGGGCGCCCGCCCGGTGGCGACCCTGAACTCCCTGCGCTTCGGCCCGCTGGACG AGCCCAAGCAGCGGGAACTGCTCAGGGGTGTGGTGGCCGGCATCGGCCATTACGGCAACACGGTGGGCGTGCCCTGCATC GGCGGGGAGGTCTACTTCGACGAGTCCTACCGGGGCAACTGCCTGGTCAACGCCATGTGCATCGGCATCCTCCGGCCGGA CCGCATCCACCGGGGCATCGCCGCCGGCCCGGGCAACGCCATCATGGTGGTGGGCAACCCGACCGGTCGGGACGGCATCC ACGCCGCGTCGCTGCTGGCCTCGGCCGAGTTCAGCGGCAGCGAGGCGGAGGCGGCGCTGCCCACGGTGCCCGTGGGCGAC CCCTTCGCCGAGAAGATGCTGATGGAGGCCTGCCTGGAACTGTTCGAGACCGACGCGGTGGTGGGTATCCAGGACATGGG CGCCGCCGGCCTCATCTCCTCGTCCTCGGAGATGGCAGCCCGGGGCGGCGTGGGCGTGGAGCTGGACGTGCGCAAGGTGC CGGCCCGGGAGGAGGGCATGGAGCCCTGGGAGTTCCTCCTCTCCGAGTCACAGGAGCGGATGCTCGTCTGCGTGAAGAAG GGGCGGGAGGCCGAGGTCGAGGCGATCTGCCGGAAGTGGGGCGTGGGCTGCGCCGTGATCGGCCGGGTGACCGACGACGG CATGGTGCGGGTGCTGGACGACGGGCGAGTCGTGGCCGAGGTGCCGGCCAGGGCGCTTGCCGAAGCGCCGGTCTACCACC CGGCCAAGGCCGAGCCCGCCTACCTGGCGGAGCTGCGGGCCTTCGACTGGTCCCGGCTGCCCGAGCCGGAGGATTGGAAT GAGACGCTGCTCCGGCTGCTGGGCTCGCCCAACATCGGCGCGCGGGCCTGGATCTACGAGCAGTTCGACCACATGGTGCA GGCGGGTACCGTCCTGGGGCCCGGCGGAGACGCCGGGGTCATCCGGCTCGGCGCGGCCGTCGCGCCGGGGGCGCACGGCC TCACCCGGCAGCCGCCGGGGGAGGGCCTGCCCGGCCGGTCCGGCCAGGCGGGGCCCCCGAAGGGCATCGCCGCCTCAGTG GACTGCAACGGCCGCTACGTCTACCTGAACCCCCGGCGGGGCACCGCCATCGCCGTGGCGGAGGCGGCCCGCAACTGCGT GGTCACCGGCGCCCGGCCCGTGGCCATCACCAACAACTGCAACTTCGGCAACCCCGAGAAGCCGGAGATCTTCTGGACCT TCGACGAGGCCATCACCGGCATGGCCGAGGCCTGCGAGGCGCTGGGCACACCCGTGACCGGCGGCAACGTCTCCTTCTAC AACGAGACCAGCGGGGAGGCCATTCACCCGACCCCGACCATCGGCATGATCGCGGTGCACGAGAACCTGGACCGGCTGAC CACCCCGGGCTTCAAGCAGGTGGGTGACGTGATCCTCCTGCTGGGCGAGACCCGGGACGAGCTGGGCGGCTCCGAGTACG CCAGGCTGATCCACGGCGTGCTGGCCGGCGACGCCCCGGCCCTGGACCTCGCCTTCGAGAAGCGGCTGCAGGACGTGGTG CTGCGGGCGATCCACGAGGGGCTGGTGACCGCCGCCCACGACGTGGCGGAGGGCGGCCTCGCGGTCGCCCTGGCGGAGAT GGCCATCGCCGCCGCGGAGCCGTCCCTGGGCTGCCAGGTGAGCATCTTCCTCGGCGAGGGCCGGGTAGACGGCCAGCTCT TCGGCGAGTCCCAGTCCCGCATCCTGGTCACGGCCACCCGGGAGCAGGTGGGGCGGCTGCAGGCCCTCCTGATGGTGGAG CAGATCCCCTTCCGGGTGCTGGGCGACGTGACCGCCGACGGCCGGTTCCGGCTGGCCGCGCTGGCTCCGGGCAGCGGGTC GGCCCACGTCTACCGGCGTCAGGAGCTGATCGACCTGCCGGTCGCGGACCTGGTGCGTGCGCACAAGGAGGCGATCCCCA GGTGGATGGACGCGTGA
Upstream 100 bases:
>100_bases ATGCCCCACCCCGAGCGGGCGACGGAGCAGGTTCTGGGTTCTGCCGACGGGCGCCTTCTGTTTGCGTCCATGGTGCAACA CCTGACGGGGAGGGTCATCC
Downstream 100 bases:
>100_bases TCCGGCCCGGTGACCCGACCCTGGCCCTGGCCCTGCAGCCCTACCTGGGCGGGTGGCCGACCAACCCGGACAAGGGCCCG GCGGACGAGTGCGGCGTCTT
Product: phosphoribosylformylglycinamidine synthetase
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II
Number of amino acids: Translated: 778; Mature: 777
Protein sequence:
>778_residues MSEMQQPWSLVGLTEAEYRRVVEILGREPNPTELHMFGVMWSEHCAYKHSKAALRRLPTRGEHVLQGPGENAGVVRIDDD LAVAFKLESHNHPSFVDPFNGAATGVGGILRDVFTMGARPVATLNSLRFGPLDEPKQRELLRGVVAGIGHYGNTVGVPCI GGEVYFDESYRGNCLVNAMCIGILRPDRIHRGIAAGPGNAIMVVGNPTGRDGIHAASLLASAEFSGSEAEAALPTVPVGD PFAEKMLMEACLELFETDAVVGIQDMGAAGLISSSSEMAARGGVGVELDVRKVPAREEGMEPWEFLLSESQERMLVCVKK GREAEVEAICRKWGVGCAVIGRVTDDGMVRVLDDGRVVAEVPARALAEAPVYHPAKAEPAYLAELRAFDWSRLPEPEDWN ETLLRLLGSPNIGARAWIYEQFDHMVQAGTVLGPGGDAGVIRLGAAVAPGAHGLTRQPPGEGLPGRSGQAGPPKGIAASV DCNGRYVYLNPRRGTAIAVAEAARNCVVTGARPVAITNNCNFGNPEKPEIFWTFDEAITGMAEACEALGTPVTGGNVSFY NETSGEAIHPTPTIGMIAVHENLDRLTTPGFKQVGDVILLLGETRDELGGSEYARLIHGVLAGDAPALDLAFEKRLQDVV LRAIHEGLVTAAHDVAEGGLAVALAEMAIAAAEPSLGCQVSIFLGEGRVDGQLFGESQSRILVTATREQVGRLQALLMVE QIPFRVLGDVTADGRFRLAALAPGSGSAHVYRRQELIDLPVADLVRAHKEAIPRWMDA
Sequences:
>Translated_778_residues MSEMQQPWSLVGLTEAEYRRVVEILGREPNPTELHMFGVMWSEHCAYKHSKAALRRLPTRGEHVLQGPGENAGVVRIDDD LAVAFKLESHNHPSFVDPFNGAATGVGGILRDVFTMGARPVATLNSLRFGPLDEPKQRELLRGVVAGIGHYGNTVGVPCI GGEVYFDESYRGNCLVNAMCIGILRPDRIHRGIAAGPGNAIMVVGNPTGRDGIHAASLLASAEFSGSEAEAALPTVPVGD PFAEKMLMEACLELFETDAVVGIQDMGAAGLISSSSEMAARGGVGVELDVRKVPAREEGMEPWEFLLSESQERMLVCVKK GREAEVEAICRKWGVGCAVIGRVTDDGMVRVLDDGRVVAEVPARALAEAPVYHPAKAEPAYLAELRAFDWSRLPEPEDWN ETLLRLLGSPNIGARAWIYEQFDHMVQAGTVLGPGGDAGVIRLGAAVAPGAHGLTRQPPGEGLPGRSGQAGPPKGIAASV DCNGRYVYLNPRRGTAIAVAEAARNCVVTGARPVAITNNCNFGNPEKPEIFWTFDEAITGMAEACEALGTPVTGGNVSFY NETSGEAIHPTPTIGMIAVHENLDRLTTPGFKQVGDVILLLGETRDELGGSEYARLIHGVLAGDAPALDLAFEKRLQDVV LRAIHEGLVTAAHDVAEGGLAVALAEMAIAAAEPSLGCQVSIFLGEGRVDGQLFGESQSRILVTATREQVGRLQALLMVE QIPFRVLGDVTADGRFRLAALAPGSGSAHVYRRQELIDLPVADLVRAHKEAIPRWMDA >Mature_777_residues SEMQQPWSLVGLTEAEYRRVVEILGREPNPTELHMFGVMWSEHCAYKHSKAALRRLPTRGEHVLQGPGENAGVVRIDDDL AVAFKLESHNHPSFVDPFNGAATGVGGILRDVFTMGARPVATLNSLRFGPLDEPKQRELLRGVVAGIGHYGNTVGVPCIG GEVYFDESYRGNCLVNAMCIGILRPDRIHRGIAAGPGNAIMVVGNPTGRDGIHAASLLASAEFSGSEAEAALPTVPVGDP FAEKMLMEACLELFETDAVVGIQDMGAAGLISSSSEMAARGGVGVELDVRKVPAREEGMEPWEFLLSESQERMLVCVKKG REAEVEAICRKWGVGCAVIGRVTDDGMVRVLDDGRVVAEVPARALAEAPVYHPAKAEPAYLAELRAFDWSRLPEPEDWNE TLLRLLGSPNIGARAWIYEQFDHMVQAGTVLGPGGDAGVIRLGAAVAPGAHGLTRQPPGEGLPGRSGQAGPPKGIAASVD CNGRYVYLNPRRGTAIAVAEAARNCVVTGARPVAITNNCNFGNPEKPEIFWTFDEAITGMAEACEALGTPVTGGNVSFYN ETSGEAIHPTPTIGMIAVHENLDRLTTPGFKQVGDVILLLGETRDELGGSEYARLIHGVLAGDAPALDLAFEKRLQDVVL RAIHEGLVTAAHDVAEGGLAVALAEMAIAAAEPSLGCQVSIFLGEGRVDGQLFGESQSRILVTATREQVGRLQALLMVEQ IPFRVLGDVTADGRFRLAALAPGSGSAHVYRRQELIDLPVADLVRAHKEAIPRWMDA
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family
Homologues:
Organism=Homo sapiens, GI31657129, Length=667, Percent_Identity=23.3883058470765, Blast_Score=81, Evalue=4e-15, Organism=Escherichia coli, GI48994899, Length=400, Percent_Identity=28.25, Blast_Score=118, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17553022, Length=650, Percent_Identity=22.6153846153846, Blast_Score=86, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6321498, Length=777, Percent_Identity=24.1956241956242, Blast_Score=131, Evalue=3e-31, Organism=Drosophila melanogaster, GI24582111, Length=662, Percent_Identity=25.5287009063444, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI24582109, Length=662, Percent_Identity=25.5287009063444, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI17137292, Length=662, Percent_Identity=25.5287009063444, Blast_Score=101, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PURL_SYMTH (Q67KF8)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076684.1 - ProteinModelPortal: Q67KF8 - SMR: Q67KF8 - GeneID: 2979754 - GenomeReviews: AP006840_GR - KEGG: sth:STH2855 - NMPDR: fig|292459.1.peg.2730 - HOGENOM: HBG311214 - OMA: YGNSFGV - BioCyc: STHE292459:STH2855-MONOMER - BRENDA: 6.3.5.3 - GO: GO:0005737 - HAMAP: MF_00420 - InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 - TIGRFAMs: TIGR01736
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like
EC number: =6.3.5.3
Molecular weight: Translated: 82897; Mature: 82766
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMQQPWSLVGLTEAEYRRVVEILGREPNPTELHMFGVMWSEHCAYKHSKAALRRLPTR CCCCCCCCCEECCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCC GEHVLQGPGENAGVVRIDDDLAVAFKLESHNHPSFVDPFNGAATGVGGILRDVFTMGARP CCCEECCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC VATLNSLRFGPLDEPKQRELLRGVVAGIGHYGNTVGVPCIGGEVYFDESYRGNCLVNAMC HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEECCCCCCCEEEEEHE IGILRPDRIHRGIAAGPGNAIMVVGNPTGRDGIHAASLLASAEFSGSEAEAALPTVPVGD EECCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC PFAEKMLMEACLELFETDAVVGIQDMGAAGLISSSSEMAARGGVGVELDVRKVPAREEGM HHHHHHHHHHHHHHHHCCCEEEHHHCCCCCEECCCHHHHHCCCCCEEEEHEECCCHHCCC EPWEFLLSESQERMLVCVKKGREAEVEAICRKWGVGCAVIGRVTDDGMVRVLDDGRVVAE CHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEEC VPARALAEAPVYHPAKAEPAYLAELRAFDWSRLPEPEDWNETLLRLLGSPNIGARAWIYE CCHHHHHCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH QFDHMVQAGTVLGPGGDAGVIRLGAAVAPGAHGLTRQPPGEGLPGRSGQAGPPKGIAASV HHHHHHHCCCEECCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE DCNGRYVYLNPRRGTAIAVAEAARNCVVTGARPVAITNNCNFGNPEKPEIFWTFDEAITG ECCCEEEEEECCCCCEEEEEHHHCCEEEECCCEEEEECCCCCCCCCCCEEEEEHHHHHHH MAEACEALGTPVTGGNVSFYNETSGEAIHPTPTIGMIAVHENLDRLTTPGFKQVGDVILL HHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCEEEEEEECCHHHHCCCCHHHHCCEEEE LGETRDELGGSEYARLIHGVLAGDAPALDLAFEKRLQDVVLRAIHEGLVTAAHDVAEGGL ECCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVALAEMAIAAAEPSLGCQVSIFLGEGRVDGQLFGESQSRILVTATREQVGRLQALLMVE HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCEEEEEECHHHHHHHHHHHHHH QIPFRVLGDVTADGRFRLAALAPGSGSAHVYRRQELIDLPVADLVRAHKEAIPRWMDA HCCHHEECCCCCCCCEEEEEECCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SEMQQPWSLVGLTEAEYRRVVEILGREPNPTELHMFGVMWSEHCAYKHSKAALRRLPTR CCCCCCCCEECCCHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCC GEHVLQGPGENAGVVRIDDDLAVAFKLESHNHPSFVDPFNGAATGVGGILRDVFTMGARP CCCEECCCCCCCCEEEECCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC VATLNSLRFGPLDEPKQRELLRGVVAGIGHYGNTVGVPCIGGEVYFDESYRGNCLVNAMC HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECCEEEECCCCCCCEEEEEHE IGILRPDRIHRGIAAGPGNAIMVVGNPTGRDGIHAASLLASAEFSGSEAEAALPTVPVGD EECCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC PFAEKMLMEACLELFETDAVVGIQDMGAAGLISSSSEMAARGGVGVELDVRKVPAREEGM HHHHHHHHHHHHHHHHCCCEEEHHHCCCCCEECCCHHHHHCCCCCEEEEHEECCCHHCCC EPWEFLLSESQERMLVCVKKGREAEVEAICRKWGVGCAVIGRVTDDGMVRVLDDGRVVAE CHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEEC VPARALAEAPVYHPAKAEPAYLAELRAFDWSRLPEPEDWNETLLRLLGSPNIGARAWIYE CCHHHHHCCCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHCCCCCCCHHHHHH QFDHMVQAGTVLGPGGDAGVIRLGAAVAPGAHGLTRQPPGEGLPGRSGQAGPPKGIAASV HHHHHHHCCCEECCCCCCCEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE DCNGRYVYLNPRRGTAIAVAEAARNCVVTGARPVAITNNCNFGNPEKPEIFWTFDEAITG ECCCEEEEEECCCCCEEEEEHHHCCEEEECCCEEEEECCCCCCCCCCCEEEEEHHHHHHH MAEACEALGTPVTGGNVSFYNETSGEAIHPTPTIGMIAVHENLDRLTTPGFKQVGDVILL HHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCEEEEEEECCHHHHCCCCHHHHCCEEEE LGETRDELGGSEYARLIHGVLAGDAPALDLAFEKRLQDVVLRAIHEGLVTAAHDVAEGGL ECCCHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AVALAEMAIAAAEPSLGCQVSIFLGEGRVDGQLFGESQSRILVTATREQVGRLQALLMVE HHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEECCCCCEEEEEECHHHHHHHHHHHHHH QIPFRVLGDVTADGRFRLAALAPGSGSAHVYRRQELIDLPVADLVRAHKEAIPRWMDA HCCHHEECCCCCCCCEEEEEECCCCCCCEEEEHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA