| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is hisB
Identifier: 51893974
GI number: 51893974
Start: 3056586
End: 3057212
Strand: Reverse
Name: hisB
Synonym: STH2836
Alternate gene names: 51893974
Gene position: 3057212-3056586 (Counterclockwise)
Preceding gene: 51893975
Following gene: 51893973
Centisome position: 85.73
GC content: 69.22
Gene sequence:
>627_bases ATGACGGACTGCAGTCGGAATGAGACGGGCGCACTGGCGGAGCGGGTCGGACAGGTGGCCCGGAAGACCCGGGAGACCGA CATCGCCGTCACGTGGCGTCTCGACGGGGCGGGACGGGCGGATGTCGACACCGGTGTGCCGTTCTTCGACCACATGCTGG ACCAGATCGCCCGCCACAGCCTCACCGATCTCACGGCCCGGGCGGTGGGCGACCTGGAGATCGACGCGCACCACACGGTG GAGGACACCGGCATCGCCCTGGGGCAGGCCCTGCGCCGCGCCCTGGGCGACGGCCGCTCCATCCGCCGGTACGGCTCGGC CTTTGTCCCCTTTGACGAGACGCTGGCCTTCGCCGCGGTGGACGTCAGCGGCCGTCCCTACCTGGTCTTTGACGCCGCGC TGCCGGCGCAGAAGGTAGGTAACTTCGACACCGAACTGGCCGAGGAGTTCTTCCGCGCCCTGGCCATGAATGCCGGCATC ACCCTGCATCTGAAGGTCCACTACGGCCGGAACACCCACCACATGATCGAGGGTCTGTTCAAGGCTTTCGCCCGGGCCCT CGGCGATGCCGTGGCGCGGGATCCCCGGGTCCTGGGGGTCCCCTCCACCAAGGGGGCCCTGTTCTGA
Upstream 100 bases:
>100_bases GGCTGGCGCTCACCGAGGACCTGCTGGCCCACGCGGCGTCGATGCAGATCCGGCTGGCGAAGCCGGACGGGGAGAGCCCA TCGGAGGGGAGGGAAGCCGG
Downstream 100 bases:
>100_bases TGGCCCGGATCGTCATCGTGGACTACGGGATGGGCAACCTCGCCAGCGTCCGGAACGCCCTGCGGGCGGTGGGCTTCGAG GCGGCGGTGAGCGACGACCC
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTDCSRNETGALAERVGQVARKTRETDIAVTWRLDGAGRADVDTGVPFFDHMLDQIARHSLTDLTARAVGDLEIDAHHTV EDTGIALGQALRRALGDGRSIRRYGSAFVPFDETLAFAAVDVSGRPYLVFDAALPAQKVGNFDTELAEEFFRALAMNAGI TLHLKVHYGRNTHHMIEGLFKAFARALGDAVARDPRVLGVPSTKGALF
Sequences:
>Translated_208_residues MTDCSRNETGALAERVGQVARKTRETDIAVTWRLDGAGRADVDTGVPFFDHMLDQIARHSLTDLTARAVGDLEIDAHHTV EDTGIALGQALRRALGDGRSIRRYGSAFVPFDETLAFAAVDVSGRPYLVFDAALPAQKVGNFDTELAEEFFRALAMNAGI TLHLKVHYGRNTHHMIEGLFKAFARALGDAVARDPRVLGVPSTKGALF >Mature_207_residues TDCSRNETGALAERVGQVARKTRETDIAVTWRLDGAGRADVDTGVPFFDHMLDQIARHSLTDLTARAVGDLEIDAHHTVE DTGIALGQALRRALGDGRSIRRYGSAFVPFDETLAFAAVDVSGRPYLVFDAALPAQKVGNFDTELAEEFFRALAMNAGIT LHLKVHYGRNTHHMIEGLFKAFARALGDAVARDPRVLGVPSTKGALF
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family
Homologues:
Organism=Escherichia coli, GI87082027, Length=196, Percent_Identity=51.530612244898, Blast_Score=184, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6324776, Length=221, Percent_Identity=39.3665158371041, Blast_Score=151, Evalue=7e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS7_SYMTH (Q67KH7)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076665.1 - ProteinModelPortal: Q67KH7 - SMR: Q67KH7 - GeneID: 2980061 - GenomeReviews: AP006840_GR - KEGG: sth:STH2836 - NMPDR: fig|292459.1.peg.2711 - HOGENOM: HBG289010 - OMA: TLHVETL - BioCyc: STHE292459:STH2836-MONOMER - BRENDA: 4.2.1.19 - GO: GO:0005737 - HAMAP: MF_00076 - InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568
Pfam domain/function: PF00475 IGPD; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: =4.2.1.19
Molecular weight: Translated: 22605; Mature: 22474
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00954 IGP_DEHYDRATASE_1; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDCSRNETGALAERVGQVARKTRETDIAVTWRLDGAGRADVDTGVPFFDHMLDQIARHS CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH LTDLTARAVGDLEIDAHHTVEDTGIALGQALRRALGDGRSIRRYGSAFVPFDETLAFAAV HHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHEEEEE DVSGRPYLVFDAALPAQKVGNFDTELAEEFFRALAMNAGITLHLKVHYGRNTHHMIEGLF ECCCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHH KAFARALGDAVARDPRVLGVPSTKGALF HHHHHHHHHHHHCCCEEEECCCCCCCCC >Mature Secondary Structure TDCSRNETGALAERVGQVARKTRETDIAVTWRLDGAGRADVDTGVPFFDHMLDQIARHS CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH LTDLTARAVGDLEIDAHHTVEDTGIALGQALRRALGDGRSIRRYGSAFVPFDETLAFAAV HHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHEEEEE DVSGRPYLVFDAALPAQKVGNFDTELAEEFFRALAMNAGITLHLKVHYGRNTHHMIEGLF ECCCCCEEEEECCCCHHHHCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHH KAFARALGDAVARDPRVLGVPSTKGALF HHHHHHHHHHHHCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA