| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is hisH
Identifier: 51893973
GI number: 51893973
Start: 3055948
End: 3056586
Strand: Reverse
Name: hisH
Synonym: STH2835
Alternate gene names: 51893973
Gene position: 3056586-3055948 (Counterclockwise)
Preceding gene: 51893974
Following gene: 51893972
Centisome position: 85.71
GC content: 73.24
Gene sequence:
>639_bases ATGGCCCGGATCGTCATCGTGGACTACGGGATGGGCAACCTCGCCAGCGTCCGGAACGCCCTGCGGGCGGTGGGCTTCGA GGCGGCGGTGAGCGACGACCCGGCGGCGGTGGCGGGGGCGGACGGCCTGGTGCTGCCCGGCGTGGGCGCGTTCGGCACCG GCATGCAGAACCTGGCCCGCCGCGGCCTCGATCAGGCCGTGCGGCAGGCGGCCGCAGCCGGCCGGCCGGTCCTGGGCATC TGCCTGGGGATGCAGCTCCTCCTCGCGGAGGGCGACGAGGGCGGCCCGCGCCCGGGGCTGGGCCTCCTGGAGGGGCGGGT TGCGCGCCTTCCCGACGGGCTGCCCCTTCCCCAGATCGGCTGGAACCTGGTGGAGCCGCAGCGGGACCACCCGCTCTTCG CCGGGCTGCCGACCCCCTTCTGGGCCTATTTCGACCACGCTTACGCGGTGGAGGGCGAACCGCCGTCCACGGCGCTGGCC CTGACCGACTACGGCCGCACCTACCCCTCGGTGGTGGGCCGCGGCAACCTGCTGGGTATCCAGTTCCATCCCGAGAAGTC CTCCCGGGCGGGACTCCGGATGCTGGCCAACTGGGGGAGAATGGTATGCGACTTGATCTCTACCCGGCCATCGACCTGA
Upstream 100 bases:
>100_bases TCGAGGGTCTGTTCAAGGCTTTCGCCCGGGCCCTCGGCGATGCCGTGGCGCGGGATCCCCGGGTCCTGGGGGTCCCCTCC ACCAAGGGGGCCCTGTTCTG
Downstream 100 bases:
>100_bases AGGACGGCCAGGTGGTGCGGCTCCGGCAGGGGCGCATGGACGAGGCCACGGTCTATGGGGTGGACCCGGTCCGGATCGCG GCTCGCTGGGCGGAGGCCGG
Product: imidazole glycerol phosphate synthase subunit
Products: NA
Alternate protein names: IGP synthase glutamine amidotransferase subunit; IGP synthase subunit hisH; ImGP synthase subunit hisH; IGPS subunit hisH
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MARIVIVDYGMGNLASVRNALRAVGFEAAVSDDPAAVAGADGLVLPGVGAFGTGMQNLARRGLDQAVRQAAAAGRPVLGI CLGMQLLLAEGDEGGPRPGLGLLEGRVARLPDGLPLPQIGWNLVEPQRDHPLFAGLPTPFWAYFDHAYAVEGEPPSTALA LTDYGRTYPSVVGRGNLLGIQFHPEKSSRAGLRMLANWGRMVCDLISTRPST
Sequences:
>Translated_212_residues MARIVIVDYGMGNLASVRNALRAVGFEAAVSDDPAAVAGADGLVLPGVGAFGTGMQNLARRGLDQAVRQAAAAGRPVLGI CLGMQLLLAEGDEGGPRPGLGLLEGRVARLPDGLPLPQIGWNLVEPQRDHPLFAGLPTPFWAYFDHAYAVEGEPPSTALA LTDYGRTYPSVVGRGNLLGIQFHPEKSSRAGLRMLANWGRMVCDLISTRPST >Mature_211_residues ARIVIVDYGMGNLASVRNALRAVGFEAAVSDDPAAVAGADGLVLPGVGAFGTGMQNLARRGLDQAVRQAAAAGRPVLGIC LGMQLLLAEGDEGGPRPGLGLLEGRVARLPDGLPLPQIGWNLVEPQRDHPLFAGLPTPFWAYFDHAYAVEGEPPSTALAL TDYGRTYPSVVGRGNLLGIQFHPEKSSRAGLRMLANWGRMVCDLISTRPST
Specific function: IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The hisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to hisF for the synthesis of IGP and AICAR
COG id: COG0118
COG function: function code E; Glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Escherichia coli, GI1788334, Length=200, Percent_Identity=41, Blast_Score=143, Evalue=9e-36, Organism=Saccharomyces cerevisiae, GI6319725, Length=210, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS5_SYMTH (Q67KH8)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076664.1 - ProteinModelPortal: Q67KH8 - SMR: Q67KH8 - GeneID: 2979862 - GenomeReviews: AP006840_GR - KEGG: sth:STH2835 - NMPDR: fig|292459.1.peg.2710 - HOGENOM: HBG292341 - OMA: ASENFED - BioCyc: STHE292459:STH2835-MONOMER - GO: GO:0005737 - HAMAP: MF_00278 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR010139 - InterPro: IPR016226 - PIRSF: PIRSF000495 - TIGRFAMs: TIGR01855
Pfam domain/function: PF00117 GATase
EC number: 2.4.2.-
Molecular weight: Translated: 22294; Mature: 22163
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 81-81 ACT_SITE 183-183 ACT_SITE 185-185
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIVIVDYGMGNLASVRNALRAVGFEAAVSDDPAAVAGADGLVLPGVGAFGTGMQNLAR CEEEEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCEEECCCCEEECCCCCHHHHHHHHHH RGLDQAVRQAAAAGRPVLGICLGMQLLLAEGDEGGPRPGLGLLEGRVARLPDGLPLPQIG HHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCHHHHCHHHHCCCCCCCCCCC WNLVEPQRDHPLFAGLPTPFWAYFDHAYAVEGEPPSTALALTDYGRTYPSVVGRGNLLGI CCCCCCCCCCCEEECCCCHHHHHHCCEEEECCCCCCCEEEECCCCCHHHHHHCCCCEEEE QFHPEKSSRAGLRMLANWGRMVCDLISTRPST EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ARIVIVDYGMGNLASVRNALRAVGFEAAVSDDPAAVAGADGLVLPGVGAFGTGMQNLAR EEEEEEECCCCCHHHHHHHHHHHCCHHHCCCCCCEEECCCCEEECCCCCHHHHHHHHHH RGLDQAVRQAAAAGRPVLGICLGMQLLLAEGDEGGPRPGLGLLEGRVARLPDGLPLPQIG HHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCHHHHCHHHHCCCCCCCCCCC WNLVEPQRDHPLFAGLPTPFWAYFDHAYAVEGEPPSTALALTDYGRTYPSVVGRGNLLGI CCCCCCCCCCCEEECCCCHHHHHHCCEEEECCCCCCCEEEECCCCCHHHHHHCCCCEEEE QFHPEKSSRAGLRMLANWGRMVCDLISTRPST EECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Glycosyltransferases; Pentosyltransferases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA