| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is hisA
Identifier: 51893972
GI number: 51893972
Start: 3055232
End: 3055912
Strand: Reverse
Name: hisA
Synonym: STH2834
Alternate gene names: 51893972
Gene position: 3055912-3055232 (Counterclockwise)
Preceding gene: 51893973
Following gene: 51893971
Centisome position: 85.69
GC content: 74.89
Gene sequence:
>681_bases ATGGACGAGGCCACGGTCTATGGGGTGGACCCGGTCCGGATCGCGGCTCGCTGGGCGGAGGCCGGCGCCCGCTGGATCCA CGTGGTGGACCTGGACGGCGCGCTCCGGGGCCGGCCGCAGAACGCCGCCGCGGTGCGGGCCATCGTGGAGGCGCTGCGCC AGAGGCACCCCGGCGTGCGGGTGCAGCTGGGCGGCGGGCTGCGCACCCTGGAGGCGCTGGAGGCCGCCCTGGCGCTGGGG GTCTCCCGGGCGATCATCGGCACCTCGGCCCTCGAAGGCGACGTGGCGGCCCGTGCGGTGGCGCGTTTCGGCCCGGACCG GGTCGCCGTCTCCATCGACGCGCGCGGCGGCTTCGTGGCCGCGCGCGGCTGGGTGGAGGTGACCCGGGTCCGGGCCGTGG ACCTGGCCGTGCGGATGCGGGAGGTCGGGGTGCGGACGGTCGTCTACACCGATATCGCCACCGACGGCATGCTCACCGGC CCCAACTTTGCCGAACTGGAGATGATGGGCCGGACCGGCCTCGATGTCATCGCCAGCGGGGGGATCTCCTCGCTGGAGGA CATCCGGCGGCTCACGGAGATCCCCGGCGTGGCCGGGGCCATCATCGGCAGGGCGCTCTACACCGGCGCGGTGGACCTGG CGGAGGCCCTGTCGCTCTGCGGAGAGACCCGTGACACGTGA
Upstream 100 bases:
>100_bases TCCGGATGCTGGCCAACTGGGGGAGAATGGTATGCGACTTGATCTCTACCCGGCCATCGACCTGAAGGACGGCCAGGTGG TGCGGCTCCGGCAGGGGCGC
Downstream 100 bases:
>100_bases TAAGGAGGCGCTGGCACCATGCCCCTCGCGAAGCGCATCATCCCGTGCCTGGATATCCGGGACGGGCGGGTGGTGAAGAA CGTCCAGTTCCACCTGAACA
Product: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MDEATVYGVDPVRIAARWAEAGARWIHVVDLDGALRGRPQNAAAVRAIVEALRQRHPGVRVQLGGGLRTLEALEAALALG VSRAIIGTSALEGDVAARAVARFGPDRVAVSIDARGGFVAARGWVEVTRVRAVDLAVRMREVGVRTVVYTDIATDGMLTG PNFAELEMMGRTGLDVIASGGISSLEDIRRLTEIPGVAGAIIGRALYTGAVDLAEALSLCGETRDT
Sequences:
>Translated_226_residues MDEATVYGVDPVRIAARWAEAGARWIHVVDLDGALRGRPQNAAAVRAIVEALRQRHPGVRVQLGGGLRTLEALEAALALG VSRAIIGTSALEGDVAARAVARFGPDRVAVSIDARGGFVAARGWVEVTRVRAVDLAVRMREVGVRTVVYTDIATDGMLTG PNFAELEMMGRTGLDVIASGGISSLEDIRRLTEIPGVAGAIIGRALYTGAVDLAEALSLCGETRDT >Mature_226_residues MDEATVYGVDPVRIAARWAEAGARWIHVVDLDGALRGRPQNAAAVRAIVEALRQRHPGVRVQLGGGLRTLEALEAALALG VSRAIIGTSALEGDVAARAVARFGPDRVAVSIDARGGFVAARGWVEVTRVRAVDLAVRMREVGVRTVVYTDIATDGMLTG PNFAELEMMGRTGLDVIASGGISSLEDIRRLTEIPGVAGAIIGRALYTGAVDLAEALSLCGETRDT
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family
Homologues:
Organism=Escherichia coli, GI87082028, Length=220, Percent_Identity=33.1818181818182, Blast_Score=92, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS4_SYMTH (Q67KH9)
Other databases:
- EMBL: AP006840 - RefSeq: YP_076663.1 - ProteinModelPortal: Q67KH9 - GeneID: 2980060 - GenomeReviews: AP006840_GR - KEGG: sth:STH2834 - NMPDR: fig|292459.1.peg.2709 - HOGENOM: HBG541613 - OMA: CARYVVT - BioCyc: STHE292459:STH2834-MONOMER - BRENDA: 5.3.1.16 - GO: GO:0005737 - HAMAP: MF_01014 - InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 - Gene3D: G3DSA:3.20.20.70 - TIGRFAMs: TIGR00007
Pfam domain/function: PF00977 His_biosynth; SSF51366 RibP_bind_barrel
EC number: =5.3.1.16
Molecular weight: Translated: 23722; Mature: 23722
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: ACT_SITE 10-10 ACT_SITE 136-136
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEATVYGVDPVRIAARWAEAGARWIHVVDLDGALRGRPQNAAAVRAIVEALRQRHPGVR CCCCEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEE VQLGGGLRTLEALEAALALGVSRAIIGTSALEGDVAARAVARFGPDRVAVSIDARGGFVA EEECCCHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHCCCCEEEEEEECCCCEEE ARGWVEVTRVRAVDLAVRMREVGVRTVVYTDIATDGMLTGPNFAELEMMGRTGLDVIASG ECCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHHHEECCCCCCHHHCCC GISSLEDIRRLTEIPGVAGAIIGRALYTGAVDLAEALSLCGETRDT CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDEATVYGVDPVRIAARWAEAGARWIHVVDLDGALRGRPQNAAAVRAIVEALRQRHPGVR CCCCEEECCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEE VQLGGGLRTLEALEAALALGVSRAIIGTSALEGDVAARAVARFGPDRVAVSIDARGGFVA EEECCCHHHHHHHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHCCCCEEEEEEECCCCEEE ARGWVEVTRVRAVDLAVRMREVGVRTVVYTDIATDGMLTGPNFAELEMMGRTGLDVIASG ECCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEECCCCHHHHEECCCCCCHHHCCC GISSLEDIRRLTEIPGVAGAIIGRALYTGAVDLAEALSLCGETRDT CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA