Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893701

Identifier: 51893701

GI number: 51893701

Start: 2752234

End: 2753151

Strand: Reverse

Name: 51893701

Synonym: STH2563

Alternate gene names: NA

Gene position: 2753151-2752234 (Counterclockwise)

Preceding gene: 51893702

Following gene: 51893700

Centisome position: 77.2

GC content: 66.23

Gene sequence:

>918_bases
GTGCAAGCGATCACGATAGGGACTGCGGCAGGAATCGACGAAATTCGCCAGCGCCTGGACGACGAGTTCCGGTTCCTCCG
GGAAGAGGGCCTGCAGGTGCGCATCGGCCAGTCACACCGGGGGAGCTTCGCCTTCCTCGACTGCGCGGTGGACGGCGCAG
GCCGGTCCTCCCAGGCCGACGCCCTCCTGCGCCACTCTGTCGCCAGCGCCCTGTCCGACGTGATCGTGGAGAAGTGGGAG
AGCGATCTCATCCGGAAGATCATCCGCGGCTCGTACTCCTACTTTTCGCGGGACGAGCAGGATCTCATCGCAGACTACAC
CGGACGCACCCTGAACGGCGGCAGTGACTCCCCCAACGGATACAAGGTCAACCGCAAGAGCCTGATCCTGCACCGGCTGC
GGGACTACTTCGACACCGCCGACGAGCTGGTGCTCGAGGGCTTTGTCAACTTCCGGCTGCGCGACTACATCGAGGAGCTG
GAAGACGCCGTGGACCGGGCGGTTGATGAGTTTCTGATGGAGCGGGAGCACCGGGAGTTCATCCGACTCCTGAGGCATTT
CGTCGAGATTCAGGAGCCCCGCATCGAGCATGTGCACGTGCTGCTGGGTCCCGGCCACGCCTTCCGGCTGCTCGATGACG
ACGGCGGCGCCATCCGCAGCGAGGCCCTGGAGGAGTTTGTGGTGGAGATGGTGGAGAGCGAGGTCAGCTACGAGGACCTG
CTCATCTCCGCGCTGATCACGCTTGCGCCCCGTTCCCTCACGGTTCACCTCGCCGACCGGCCTCCCGGCCGGGACGAGGC
CCTGGAGACGATTCTCGGCGTGTTCGGCGATCGCACGGTGCGGTGCGAGGGCTGCCCCGTCTGCAGCCAGGCCACGGCTG
CGGCCTGCGAGCCGTCCCAGGCCACGCTGCACCACTGA

Upstream 100 bases:

>100_bases
TCGCGGCCGGTCATATACTACTACGGCAGATACCCTCGGCTTCGAGACGCTTCGTGCGATCCCTCGGAGCCGATTTCTTG
CAAAGAGGGGTGAAACGGCC

Downstream 100 bases:

>100_bases
CCGGATGGCCTGCCCTGGCCCAATGGGCGCACCCCCGGGCTGACAGGCTGACACTTGGGGAGGGTTTGCGACCCTCCTCT
TGTTGTTTTCAGACCAGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MQAITIGTAAGIDEIRQRLDDEFRFLREEGLQVRIGQSHRGSFAFLDCAVDGAGRSSQADALLRHSVASALSDVIVEKWE
SDLIRKIIRGSYSYFSRDEQDLIADYTGRTLNGGSDSPNGYKVNRKSLILHRLRDYFDTADELVLEGFVNFRLRDYIEEL
EDAVDRAVDEFLMEREHREFIRLLRHFVEIQEPRIEHVHVLLGPGHAFRLLDDDGGAIRSEALEEFVVEMVESEVSYEDL
LISALITLAPRSLTVHLADRPPGRDEALETILGVFGDRTVRCEGCPVCSQATAAACEPSQATLHH

Sequences:

>Translated_305_residues
MQAITIGTAAGIDEIRQRLDDEFRFLREEGLQVRIGQSHRGSFAFLDCAVDGAGRSSQADALLRHSVASALSDVIVEKWE
SDLIRKIIRGSYSYFSRDEQDLIADYTGRTLNGGSDSPNGYKVNRKSLILHRLRDYFDTADELVLEGFVNFRLRDYIEEL
EDAVDRAVDEFLMEREHREFIRLLRHFVEIQEPRIEHVHVLLGPGHAFRLLDDDGGAIRSEALEEFVVEMVESEVSYEDL
LISALITLAPRSLTVHLADRPPGRDEALETILGVFGDRTVRCEGCPVCSQATAAACEPSQATLHH
>Mature_305_residues
MQAITIGTAAGIDEIRQRLDDEFRFLREEGLQVRIGQSHRGSFAFLDCAVDGAGRSSQADALLRHSVASALSDVIVEKWE
SDLIRKIIRGSYSYFSRDEQDLIADYTGRTLNGGSDSPNGYKVNRKSLILHRLRDYFDTADELVLEGFVNFRLRDYIEEL
EDAVDRAVDEFLMEREHREFIRLLRHFVEIQEPRIEHVHVLLGPGHAFRLLDDDGGAIRSEALEEFVVEMVESEVSYEDL
LISALITLAPRSLTVHLADRPPGRDEALETILGVFGDRTVRCEGCPVCSQATAAACEPSQATLHH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34342; Mature: 34342

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAITIGTAAGIDEIRQRLDDEFRFLREEGLQVRIGQSHRGSFAFLDCAVDGAGRSSQAD
CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCHHHH
ALLRHSVASALSDVIVEKWESDLIRKIIRGSYSYFSRDEQDLIADYTGRTLNGGSDSPNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
YKVNRKSLILHRLRDYFDTADELVLEGFVNFRLRDYIEELEDAVDRAVDEFLMEREHREF
EECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLLRHFVEIQEPRIEHVHVLLGPGHAFRLLDDDGGAIRSEALEEFVVEMVESEVSYEDL
HHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHH
LISALITLAPRSLTVHLADRPPGRDEALETILGVFGDRTVRCEGCPVCSQATAAACEPSQ
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCCCCC
ATLHH
CCCCC
>Mature Secondary Structure
MQAITIGTAAGIDEIRQRLDDEFRFLREEGLQVRIGQSHRGSFAFLDCAVDGAGRSSQAD
CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEEECCCCCCHHHH
ALLRHSVASALSDVIVEKWESDLIRKIIRGSYSYFSRDEQDLIADYTGRTLNGGSDSPNG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCC
YKVNRKSLILHRLRDYFDTADELVLEGFVNFRLRDYIEELEDAVDRAVDEFLMEREHREF
EECCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRLLRHFVEIQEPRIEHVHVLLGPGHAFRLLDDDGGAIRSEALEEFVVEMVESEVSYEDL
HHHHHHHHHHCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHHH
LISALITLAPRSLTVHLADRPPGRDEALETILGVFGDRTVRCEGCPVCSQATAAACEPSQ
HHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHCCCCCC
ATLHH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA