| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is hppA [H]
Identifier: 51893700
GI number: 51893700
Start: 2749980
End: 2751959
Strand: Reverse
Name: hppA [H]
Synonym: STH2562
Alternate gene names: 51893700
Gene position: 2751959-2749980 (Counterclockwise)
Preceding gene: 51893701
Following gene: 51893699
Centisome position: 77.17
GC content: 68.99
Gene sequence:
>1980_bases GTGCTCGCGCTCATCGTGGCCGGGCTGCTCGCCGCCAAGATCCGGGGGCAGGATCCAGGAACCCCGCGTATGCAGGAGAT TGCCGCCGCCATCCATGACGGCGCCATGGCTTTCCTCAACCGGGAGTACCGGACCCTCGTCGTCTTCGTGCTCGCCCTGG CTATCATCATCCTCATTGCGGGCTTCACCACCGATGCCATGCAGTGGCAGACCGCCATCGCCTTCGTGGCCGGCGCGCTC TGCTCGGTGCTCGCCGGCAACTTCGGCATGCGGGTGGCCACCATGGCCAACGTCCGCACGGCCAACGCCGCGCAGCATGG CCTGAACCGGGCCCTGGACATCGCCTTCTCGGGCGGCGCCGTGATGGGCCTCTCCGTCGTCGGCCTGGGCATGCTGGGCG TCGGCGTGGTCTACCTGATCTTCCGTGACCCGGACATCGTCAACGGCTTCGCCCTCGGCGCCTCCTCCATCGCCCTGTTC GCCCGCGTCGGCGGCGGCATCTACACCAAGGCCGCAGACGTCGGCGCTGACCTGGTGGGCAAGGTGGAGGCCGGCATTCC GGAGGACGACCCCCGCAATCCGGCCGTCATCGCCGACAATGTCGGTGACAACGTGGGCGACGTCGCGGGCATGGGCGCCG ACCTCTTTGAGTCCTACGTCGGCGCCGTCATCGCCGCGATGGCCATCGCCGTCGTCGACAAGGACATCGACCCGAATCTG GCCGCGCTGCCCCTGCTGATCGCCGCCGGCGGCATCGTGGCATCGGTCATCGGCACCCAGTTCGTGCGCGGCAAGGAGGG CGGCAACCCGGCCAAGGCCCTGAACGCGGGCACCTACGCCGCGGGCATCCTCACCCTTATCGTCGCCGCCGTCATCTCGT TCCTGGGCTACGGCACTCACATCTACTTCACGGCCGTGGTGGCGGGCCTCATCGCCGGCATCGCCATCGGTCAGCTCACC GAGTACTACACCTCTGGCGACTACGGCCCCGTCAAGTCCATCGCCGACGCCTCCCGGACCGGCCCGGCGACCAACATCAT CTCCGGCCTGGGCGTCGGTATGATGTCCACCGCCCTGCCGATCCTGGTCATCGGCGCCGCCACGCTGGTCGGCTACCTGG TGGGCGCGCCCCATGGCCAGGGGCTCTTCACCATCGCCCTGGCGGCCGTGGGCATGCTTTCCACCACGGGCATGACCGTC GCGGTGGACGCCTACGGCCCCATCGCCGACAACGCCGGCGGCATCGCCGAGATGAGCCACCTGGATCCGAAGGTGCGCAA GACCACCGACACCCTGGACTCGGTGGGCAACACCACCGCGGCCATCGGCAAGGGCTTCGCCATCGGTTCGGCGGCGCTGA CCGCCCTGTCGCTCTTCGGCGCCTTCGCCACGGCCGCGGGCCTGGGTAACGTCTCCATGACCGATCCGAAGCTGATCGTC GGCCTCTTCGTCGGCGGTATGCTGCCCTTCCTGTTCGGCGCGCTGACCATGAACGCCGTCGGCCGGGCCGCAATGCAGAT GGTGGAGGAGGTCCGCCGGCAGTTCCGGGAGATCCCGGGCATCATGGAGGAGAAGGCCAAGCCCGACTACGCCCGCTGCG TGGACATCTCCACGGGCGCTGCCCTGAAGGAGATGATCGTCCCCGGCCTGATGGCCGTGGCGGCGCCGCTGCTCACGGGC TGGCTGCTGGGCGTCACGGCCCTGGCGGGCCTGCTGGCGGGCGCCCTGGTCACCGGCGTCATGATGGCCATCATGATGGC CAACGCCGGCGGCGCGTGGGATAACGCGAAGAAGTACATCGAGGCCGGCGCCCACGGCGGCAAGGGTTCCGAGCCCCACA AGGCGGCCGTCGTCGGCGACACGGTCGGCGACCCCTTCAAGGACACCTCCGGCCCGTCGATGAACATCCTGATCAAGCTG ATGACCATCGTCTCGCTAGTCTTCGCCGCCACCTTCGGCAACGGGCTCCTGCCCTTCTAG
Upstream 100 bases:
>100_bases TGGATAACTAGCATTGGGTCAGTCTATGCTAGTGTTTTGGAAAGGAGATCGGATCCCAGTGAACATGGCAAGTCTCGCCT GGCTTGCCCCGGCGGCCGGC
Downstream 100 bases:
>100_bases AGCCACTGAGTTCACCGAGGCCGCCCCGGCGACGGGGCGGCCTGCTCGTTCCGGGGCTTTTCCGAGTCGGCGACAGGGAT CGCGCCCCGGGGCGGCGAAA
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound sodium-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; Na(+)-PPase [H]
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MLALIVAGLLAAKIRGQDPGTPRMQEIAAAIHDGAMAFLNREYRTLVVFVLALAIIILIAGFTTDAMQWQTAIAFVAGAL CSVLAGNFGMRVATMANVRTANAAQHGLNRALDIAFSGGAVMGLSVVGLGMLGVGVVYLIFRDPDIVNGFALGASSIALF ARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGAVIAAMAIAVVDKDIDPNL AALPLLIAAGGIVASVIGTQFVRGKEGGNPAKALNAGTYAAGILTLIVAAVISFLGYGTHIYFTAVVAGLIAGIAIGQLT EYYTSGDYGPVKSIADASRTGPATNIISGLGVGMMSTALPILVIGAATLVGYLVGAPHGQGLFTIALAAVGMLSTTGMTV AVDAYGPIADNAGGIAEMSHLDPKVRKTTDTLDSVGNTTAAIGKGFAIGSAALTALSLFGAFATAAGLGNVSMTDPKLIV GLFVGGMLPFLFGALTMNAVGRAAMQMVEEVRRQFREIPGIMEEKAKPDYARCVDISTGAALKEMIVPGLMAVAAPLLTG WLLGVTALAGLLAGALVTGVMMAIMMANAGGAWDNAKKYIEAGAHGGKGSEPHKAAVVGDTVGDPFKDTSGPSMNILIKL MTIVSLVFAATFGNGLLPF
Sequences:
>Translated_659_residues MLALIVAGLLAAKIRGQDPGTPRMQEIAAAIHDGAMAFLNREYRTLVVFVLALAIIILIAGFTTDAMQWQTAIAFVAGAL CSVLAGNFGMRVATMANVRTANAAQHGLNRALDIAFSGGAVMGLSVVGLGMLGVGVVYLIFRDPDIVNGFALGASSIALF ARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGAVIAAMAIAVVDKDIDPNL AALPLLIAAGGIVASVIGTQFVRGKEGGNPAKALNAGTYAAGILTLIVAAVISFLGYGTHIYFTAVVAGLIAGIAIGQLT EYYTSGDYGPVKSIADASRTGPATNIISGLGVGMMSTALPILVIGAATLVGYLVGAPHGQGLFTIALAAVGMLSTTGMTV AVDAYGPIADNAGGIAEMSHLDPKVRKTTDTLDSVGNTTAAIGKGFAIGSAALTALSLFGAFATAAGLGNVSMTDPKLIV GLFVGGMLPFLFGALTMNAVGRAAMQMVEEVRRQFREIPGIMEEKAKPDYARCVDISTGAALKEMIVPGLMAVAAPLLTG WLLGVTALAGLLAGALVTGVMMAIMMANAGGAWDNAKKYIEAGAHGGKGSEPHKAAVVGDTVGDPFKDTSGPSMNILIKL MTIVSLVFAATFGNGLLPF >Mature_659_residues MLALIVAGLLAAKIRGQDPGTPRMQEIAAAIHDGAMAFLNREYRTLVVFVLALAIIILIAGFTTDAMQWQTAIAFVAGAL CSVLAGNFGMRVATMANVRTANAAQHGLNRALDIAFSGGAVMGLSVVGLGMLGVGVVYLIFRDPDIVNGFALGASSIALF ARVGGGIYTKAADVGADLVGKVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGAVIAAMAIAVVDKDIDPNL AALPLLIAAGGIVASVIGTQFVRGKEGGNPAKALNAGTYAAGILTLIVAAVISFLGYGTHIYFTAVVAGLIAGIAIGQLT EYYTSGDYGPVKSIADASRTGPATNIISGLGVGMMSTALPILVIGAATLVGYLVGAPHGQGLFTIALAAVGMLSTTGMTV AVDAYGPIADNAGGIAEMSHLDPKVRKTTDTLDSVGNTTAAIGKGFAIGSAALTALSLFGAFATAAGLGNVSMTDPKLIV GLFVGGMLPFLFGALTMNAVGRAAMQMVEEVRRQFREIPGIMEEKAKPDYARCVDISTGAALKEMIVPGLMAVAAPLLTG WLLGVTALAGLLAGALVTGVMMAIMMANAGGAWDNAKKYIEAGAHGGKGSEPHKAAVVGDTVGDPFKDTSGPSMNILIKL MTIVSLVFAATFGNGLLPF
Specific function: Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 66604; Mature: 66604
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLALIVAGLLAAKIRGQDPGTPRMQEIAAAIHDGAMAFLNREYRTLVVFVLALAIIILIA CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFTTDAMQWQTAIAFVAGALCSVLAGNFGMRVATMANVRTANAAQHGLNRALDIAFSGGA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEECCCH VMGLSVVGLGMLGVGVVYLIFRDPDIVNGFALGASSIALFARVGGGIYTKAADVGADLVG HHHHHHHHHHHHHHHHHHHEECCCCHHCHHHHHHHHHHHHHHHCCCCEEHHHHHCHHHHH KVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGAVIAAMAIAVVDKDIDPNL HHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH AALPLLIAAGGIVASVIGTQFVRGKEGGNPAKALNAGTYAAGILTLIVAAVISFLGYGTH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHH IYFTAVVAGLIAGIAIGQLTEYYTSGDYGPVKSIADASRTGPATNIISGLGVGMMSTALP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ILVIGAATLVGYLVGAPHGQGLFTIALAAVGMLSTTGMTVAVDAYGPIADNAGGIAEMSH HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHH LDPKVRKTTDTLDSVGNTTAAIGKGFAIGSAALTALSLFGAFATAAGLGNVSMTDPKLIV CCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GLFVGGMLPFLFGALTMNAVGRAAMQMVEEVRRQFREIPGIMEEKAKPDYARCVDISTGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHEEECCCCH ALKEMIVPGLMAVAAPLLTGWLLGVTALAGLLAGALVTGVMMAIMMANAGGAWDNAKKYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EAGAHGGKGSEPHKAAVVGDTVGDPFKDTSGPSMNILIKLMTIVSLVFAATFGNGLLPF HHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLALIVAGLLAAKIRGQDPGTPRMQEIAAAIHDGAMAFLNREYRTLVVFVLALAIIILIA CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GFTTDAMQWQTAIAFVAGALCSVLAGNFGMRVATMANVRTANAAQHGLNRALDIAFSGGA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHEEEECCCH VMGLSVVGLGMLGVGVVYLIFRDPDIVNGFALGASSIALFARVGGGIYTKAADVGADLVG HHHHHHHHHHHHHHHHHHHEECCCCHHCHHHHHHHHHHHHHHHCCCCEEHHHHHCHHHHH KVEAGIPEDDPRNPAVIADNVGDNVGDVAGMGADLFESYVGAVIAAMAIAVVDKDIDPNL HHHCCCCCCCCCCCEEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH AALPLLIAAGGIVASVIGTQFVRGKEGGNPAKALNAGTYAAGILTLIVAAVISFLGYGTH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHH IYFTAVVAGLIAGIAIGQLTEYYTSGDYGPVKSIADASRTGPATNIISGLGVGMMSTALP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ILVIGAATLVGYLVGAPHGQGLFTIALAAVGMLSTTGMTVAVDAYGPIADNAGGIAEMSH HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHH LDPKVRKTTDTLDSVGNTTAAIGKGFAIGSAALTALSLFGAFATAAGLGNVSMTDPKLIV CCCHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH GLFVGGMLPFLFGALTMNAVGRAAMQMVEEVRRQFREIPGIMEEKAKPDYARCVDISTGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHEEECCCCH ALKEMIVPGLMAVAAPLLTGWLLGVTALAGLLAGALVTGVMMAIMMANAGGAWDNAKKYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH EAGAHGGKGSEPHKAAVVGDTVGDPFKDTSGPSMNILIKLMTIVSLVFAATFGNGLLPF HHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA