| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is paaA [H]
Identifier: 51893624
GI number: 51893624
Start: 2668139
End: 2669077
Strand: Reverse
Name: paaA [H]
Synonym: STH2486
Alternate gene names: 51893624
Gene position: 2669077-2668139 (Counterclockwise)
Preceding gene: 51893625
Following gene: 51893623
Centisome position: 74.85
GC content: 70.07
Gene sequence:
>939_bases GTGCGCACGCTTGACGAACGGCACGCGGAGTTCCTGGACCGCGTGACCCGGGGGGAGAAGGTCGAGGCGACCGACTGGAT GCCCGACGAGAGCCGCATGGCCCTGGTCAAGTTCCTGCAGATGCACGCCCTTTCCGAGTTGATGGGCGCCCTGCCCGAGA AGGAGTGGGTGCCCCGGGCGCCGACGCTGGCGCGCAAGCTGAGCCTGATGGCGAAGGTGCAGGACGAGGTGGGCCACGCC CAGCTGATCCTGCGGGTGGCCGAGGACCTGGCGGCCCCGCTGGGCAAGGGCCGGGAGGAGCTGGTGGAGGAGCTGTTCAC CGGCGAGTGCAAGTTCCACAACGTGTTTCACATGCCGGCGCCCACGTGGGCCGACGCGGGCATCATCGGCTGGCTGGTGG ACGGCGCCGCGGTGGTCACGCAGGCGGCCCTGCTGACCTCCTCCTACGCGCCTTATGCCCGGGTGCTGCAGCGAGTCTGC GCCGAGGAGGGGTTTCACATCCAGCACGGCGAGTCCATCTGCCTGGCGCTGGCAGAGGGGACCCCGGCCCAGCGCCGGAT GTTGCAGGAGGCCCTGGAGCGCTGGTGGGAGCCGTTGCTGCTCTTTTTCGGCCCCCCGGAATCGAACTCGCCCGCGTCGG CCGTCCTCTTCCGGTACCGGTTCCGCACCAAGACCAACGAGGAGCTCCGGCAGAAGTTCCTCAGCAAGTACGTGCCCCGC ATCCGGGCCCTGGGGCTGACCATCCCGGACCCGGAACTGCGGTACGACGAGGCGGCCGGCCGGTGGATCTACACCCCGCC CGACTGGTCCAAGCTGAAGGCCATCGCCCGCAACCAGGGGCCGCTGTCGCAGTACCGGTTGGGGCTCAGGCGGCTCTCCT ACGAGCAGGGACGCTGGGTGCGGGAGGCGCTGCTGACCCCGGCGGCGCAGGCGGTATAG
Upstream 100 bases:
>100_bases CCCCTCCAACTGTGGGCGCCTGAACCGCTGCGGATCAAGCCCGCCGCCCATCGCCCCACATCGATTGTCATCTTCACGGC CGCAACGGGGAGGGAGAACC
Downstream 100 bases:
>100_bases GGGGTGGTGTCCCGTGGCGCTGCAGGAGCCTCCGGAGAAGGCGATGGCGCGGCCGCCCGGCGAGGGGGGCCGGCGCTTCC GGGTCTACGAGATCTTCGTG
Product: phenylacetate-CoA oxygenase subunit PaaA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRTLDERHAEFLDRVTRGEKVEATDWMPDESRMALVKFLQMHALSELMGALPEKEWVPRAPTLARKLSLMAKVQDEVGHA QLILRVAEDLAAPLGKGREELVEELFTGECKFHNVFHMPAPTWADAGIIGWLVDGAAVVTQAALLTSSYAPYARVLQRVC AEEGFHIQHGESICLALAEGTPAQRRMLQEALERWWEPLLLFFGPPESNSPASAVLFRYRFRTKTNEELRQKFLSKYVPR IRALGLTIPDPELRYDEAAGRWIYTPPDWSKLKAIARNQGPLSQYRLGLRRLSYEQGRWVREALLTPAAQAV
Sequences:
>Translated_312_residues MRTLDERHAEFLDRVTRGEKVEATDWMPDESRMALVKFLQMHALSELMGALPEKEWVPRAPTLARKLSLMAKVQDEVGHA QLILRVAEDLAAPLGKGREELVEELFTGECKFHNVFHMPAPTWADAGIIGWLVDGAAVVTQAALLTSSYAPYARVLQRVC AEEGFHIQHGESICLALAEGTPAQRRMLQEALERWWEPLLLFFGPPESNSPASAVLFRYRFRTKTNEELRQKFLSKYVPR IRALGLTIPDPELRYDEAAGRWIYTPPDWSKLKAIARNQGPLSQYRLGLRRLSYEQGRWVREALLTPAAQAV >Mature_312_residues MRTLDERHAEFLDRVTRGEKVEATDWMPDESRMALVKFLQMHALSELMGALPEKEWVPRAPTLARKLSLMAKVQDEVGHA QLILRVAEDLAAPLGKGREELVEELFTGECKFHNVFHMPAPTWADAGIIGWLVDGAAVVTQAALLTSSYAPYARVLQRVC AEEGFHIQHGESICLALAEGTPAQRRMLQEALERWWEPLLLFFGPPESNSPASAVLFRYRFRTKTNEELRQKFLSKYVPR IRALGLTIPDPELRYDEAAGRWIYTPPDWSKLKAIARNQGPLSQYRLGLRRLSYEQGRWVREALLTPAAQAV
Specific function: May be part of a multicomponent oxygenase involved in phenylacetyl-CoA hydroxylation [H]
COG id: COG3396
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787654, Length=298, Percent_Identity=43.9597315436242, Blast_Score=287, Evalue=7e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR011881 - InterPro: IPR007814 [H]
Pfam domain/function: PF05138 PaaA_PaaC [H]
EC number: NA
Molecular weight: Translated: 35457; Mature: 35457
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTLDERHAEFLDRVTRGEKVEATDWMPDESRMALVKFLQMHALSELMGALPEKEWVPRA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PTLARKLSLMAKVQDEVGHAQLILRVAEDLAAPLGKGREELVEELFTGECKFHNVFHMPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCC PTWADAGIIGWLVDGAAVVTQAALLTSSYAPYARVLQRVCAEEGFHIQHGESICLALAEG CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCEEEEEECCC TPAQRRMLQEALERWWEPLLLFFGPPESNSPASAVLFRYRFRTKTNEELRQKFLSKYVPR CHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IRALGLTIPDPELRYDEAAGRWIYTPPDWSKLKAIARNQGPLSQYRLGLRRLSYEQGRWV HHHCCCCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH REALLTPAAQAV HHHHHCCHHHCC >Mature Secondary Structure MRTLDERHAEFLDRVTRGEKVEATDWMPDESRMALVKFLQMHALSELMGALPEKEWVPRA CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PTLARKLSLMAKVQDEVGHAQLILRVAEDLAAPLGKGREELVEELFTGECKFHNVFHMPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCEEECCC PTWADAGIIGWLVDGAAVVTQAALLTSSYAPYARVLQRVCAEEGFHIQHGESICLALAEG CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCEEEEEECCC TPAQRRMLQEALERWWEPLLLFFGPPESNSPASAVLFRYRFRTKTNEELRQKFLSKYVPR CHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IRALGLTIPDPELRYDEAAGRWIYTPPDWSKLKAIARNQGPLSQYRLGLRRLSYEQGRWV HHHCCCCCCCCCCCCHHHCCCEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH REALLTPAAQAV HHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9278503; 10766858 [H]