Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is paaB

Identifier: 51893623

GI number: 51893623

Start: 2667745

End: 2668095

Strand: Reverse

Name: paaB

Synonym: STH2485

Alternate gene names: NA

Gene position: 2668095-2667745 (Counterclockwise)

Preceding gene: 51893624

Following gene: 51893622

Centisome position: 74.82

GC content: 71.23

Gene sequence:

>351_bases
ATGGCGCGGCCGCCCGGCGAGGGGGGCCGGCGCTTCCGGGTCTACGAGATCTTCGTGCAGAAGGACCACCAGAGCCCGCA
CGTGTGGGTGGGCTCGGTGGACGCCGGGTCCGCGGAGGACGCCCTGCTGCTGGCGCGGGAGTCCTTCCTGCGGCGGGATC
CGGCCGTCTCCATCTGGGCGGTGGAGCAGTCGGCGATCCACCGGACCGATTACGCCGACCGGGACTTCTTCGCCCGGGAG
ACCGACAAGCGGTACCGGACCCTGGCGGGCTACCGGGAATCCAACGCTGAGCGCTGGCGCAAGTACCGCCGGGAGCTGCT
GGACCTGGAGCGGGATTTCGTCCGCGACTGA

Upstream 100 bases:

>100_bases
GAGCAGGGACGCTGGGTGCGGGAGGCGCTGCTGACCCCGGCGGCGCAGGCGGTATAGGGGGTGGTGTCCCGTGGCGCTGC
AGGAGCCTCCGGAGAAGGCG

Downstream 100 bases:

>100_bases
GCACCGGCCGGCGCCGCGCCATGCGGGCTGCCGCCGGGGGGGAGGGGTTTGGGTGGACACCGCGAGCGTGATTGCGCTTC
TCTATCAGCTGGCCGACGAC

Product: phenylacetic acid degradation protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation Protein

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MARPPGEGGRRFRVYEIFVQKDHQSPHVWVGSVDAGSAEDALLLARESFLRRDPAVSIWAVEQSAIHRTDYADRDFFARE
TDKRYRTLAGYRESNAERWRKYRRELLDLERDFVRD

Sequences:

>Translated_116_residues
MARPPGEGGRRFRVYEIFVQKDHQSPHVWVGSVDAGSAEDALLLARESFLRRDPAVSIWAVEQSAIHRTDYADRDFFARE
TDKRYRTLAGYRESNAERWRKYRRELLDLERDFVRD
>Mature_115_residues
ARPPGEGGRRFRVYEIFVQKDHQSPHVWVGSVDAGSAEDALLLARESFLRRDPAVSIWAVEQSAIHRTDYADRDFFARET
DKRYRTLAGYRESNAERWRKYRRELLDLERDFVRD

Specific function: Unknown

COG id: COG3460

COG function: function code Q; Uncharacterized enzyme of phenylacetate metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13760; Mature: 13629

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPPGEGGRRFRVYEIFVQKDHQSPHVWVGSVDAGSAEDALLLARESFLRRDPAVSIWA
CCCCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEE
VEQSAIHRTDYADRDFFARETDKRYRTLAGYRESNAERWRKYRRELLDLERDFVRD
ECHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARPPGEGGRRFRVYEIFVQKDHQSPHVWVGSVDAGSAEDALLLARESFLRRDPAVSIWA
CCCCCCCCCEEEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEE
VEQSAIHRTDYADRDFFARETDKRYRTLAGYRESNAERWRKYRRELLDLERDFVRD
ECHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA