Click here to switch to the map view.

The map label for this gene is ypjC [H]

Identifier: 51893594

GI number: 51893594

Start: 2643291

End: 2644124

Strand: Reverse

Name: ypjC [H]

Synonym: STH2456

Alternate gene names: 51893594

Gene position: 2644124-2643291 (Counterclockwise)

Preceding gene: 51893595

Following gene: 51893589

Centisome position: 74.15

GC content: 67.87

Gene sequence:

>834_bases
GTGCTCTGGATACTGCAGCTGCTCGCCGGCGCGCTGCTGATGGCCCTCTCGGCCAATGTCTTCCTCGTGCCGCTGAAGCT
GGCCGAAGGCGGCGTCACCGGCATCGGCATCATCCTCTACCACCTCCTGGGGGTGCCCATGTGGGTCACCCAGGTGGTCG
TCAACATCCCCATCCTCGCCCTTGGGCTGAAAGTAAAGGGCTGGCGGCTCATCCGGCGCTCGCTCATCGGGGTGGCCGCC
TACTCGTTCTTCCTGGCGGTCACGGCCAACGTCCCGCCCATCACGGACCAGGTGGTGCTGGCCATCATCTACGGCGGCCT
CACCATGGGCATCGGCCTGGGCCTGGTCCTGCGTTCCGGCGGCAGCACGGGGGGCACCGAGGTGCTGGCCCTGGTGCTGC
AGCAGCGGTCCGGCTTCTCGGTCGGATCCATGGTGCTCGCGGTGGACACCGTCGTCCTGGCCATGGCGGCGGTCGCCTTC
TCGCCCGAGGCGGCCATGTGGGCGGTCATCACCCTGATCATCTCGTCGAAGGTCGTCGACGTCGTGCAGGTGGGCCTCTA
CTCGGCCCGGGGCGTGACCATCATCACCACCCGGCCGGAGCCGATCGCTCGCCGGATCATGAACGAGGTCGAGCGCGGCG
TGACGATCATCAACGGCACCGGGGCCTTCACCGGCGAGCCCCGCACCATCCTCTATACCGTCGCCCAGCGCACCGAGCTC
ACCCAGGTCAAGCAGATCGCGTACGCGGAGGACCCGAAGGCGTTCGTGGTGGTGGCTGAGGTGCACGAGGTGCTGGGCGA
GGGCTTCCGGGACCCGTCGAAGGATATGCACTAG

Upstream 100 bases:

>100_bases
CAAGAACGTTTCGGACAAGGAGAAGGAGCAGGAGTAGGCGCGGGCAGACTACGGACGTCTGCTCGTACCGCCCCGCCTGT
CCGCCCAAGGAGGCCCCGAC

Downstream 100 bases:

>100_bases
GATCCGGGCACAGCCCGGAGGCAGTGACAAGGCCAGGCGAGCCGCCTGGCCTTTCCTGATGCCGTGTTCAGTTCAGAAAC
CACATGATCCACGCGGGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLWILQLLAGALLMALSANVFLVPLKLAEGGVTGIGIILYHLLGVPMWVTQVVVNIPILALGLKVKGWRLIRRSLIGVAA
YSFFLAVTANVPPITDQVVLAIIYGGLTMGIGLGLVLRSGGSTGGTEVLALVLQQRSGFSVGSMVLAVDTVVLAMAAVAF
SPEAAMWAVITLIISSKVVDVVQVGLYSARGVTIITTRPEPIARRIMNEVERGVTIINGTGAFTGEPRTILYTVAQRTEL
TQVKQIAYAEDPKAFVVVAEVHEVLGEGFRDPSKDMH

Sequences:

>Translated_277_residues
MLWILQLLAGALLMALSANVFLVPLKLAEGGVTGIGIILYHLLGVPMWVTQVVVNIPILALGLKVKGWRLIRRSLIGVAA
YSFFLAVTANVPPITDQVVLAIIYGGLTMGIGLGLVLRSGGSTGGTEVLALVLQQRSGFSVGSMVLAVDTVVLAMAAVAF
SPEAAMWAVITLIISSKVVDVVQVGLYSARGVTIITTRPEPIARRIMNEVERGVTIINGTGAFTGEPRTILYTVAQRTEL
TQVKQIAYAEDPKAFVVVAEVHEVLGEGFRDPSKDMH
>Mature_277_residues
MLWILQLLAGALLMALSANVFLVPLKLAEGGVTGIGIILYHLLGVPMWVTQVVVNIPILALGLKVKGWRLIRRSLIGVAA
YSFFLAVTANVPPITDQVVLAIIYGGLTMGIGLGLVLRSGGSTGGTEVLALVLQQRSGFSVGSMVLAVDTVVLAMAAVAF
SPEAAMWAVITLIISSKVVDVVQVGLYSARGVTIITTRPEPIARRIMNEVERGVTIINGTGAFTGEPRTILYTVAQRTEL
TQVKQIAYAEDPKAFVVVAEVHEVLGEGFRDPSKDMH

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 29428; Mature: 29428

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWILQLLAGALLMALSANVFLVPLKLAEGGVTGIGIILYHLLGVPMWVTQVVVNIPILA
CHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHE
LGLKVKGWRLIRRSLIGVAAYSFFLAVTANVPPITDQVVLAIIYGGLTMGIGLGLVLRSG
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECC
GSTGGTEVLALVLQQRSGFSVGSMVLAVDTVVLAMAAVAFSPEAAMWAVITLIISSKVVD
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VVQVGLYSARGVTIITTRPEPIARRIMNEVERGVTIINGTGAFTGEPRTILYTVAQRTEL
HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEHHHHHH
TQVKQIAYAEDPKAFVVVAEVHEVLGEGFRDPSKDMH
HHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLWILQLLAGALLMALSANVFLVPLKLAEGGVTGIGIILYHLLGVPMWVTQVVVNIPILA
CHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHE
LGLKVKGWRLIRRSLIGVAAYSFFLAVTANVPPITDQVVLAIIYGGLTMGIGLGLVLRSG
EECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECC
GSTGGTEVLALVLQQRSGFSVGSMVLAVDTVVLAMAAVAFSPEAAMWAVITLIISSKVVD
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VVQVGLYSARGVTIITTRPEPIARRIMNEVERGVTIINGTGAFTGEPRTILYTVAQRTEL
HHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEHHHHHH
TQVKQIAYAEDPKAFVVVAEVHEVLGEGFRDPSKDMH
HHHHHHHHCCCCCCEEEHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]