Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893589

Identifier: 51893589

GI number: 51893589

Start: 2638535

End: 2638939

Strand: Reverse

Name: 51893589

Synonym: STH2451

Alternate gene names: NA

Gene position: 2638939-2638535 (Counterclockwise)

Preceding gene: 51893594

Following gene: 51893588

Centisome position: 74.0

GC content: 70.86

Gene sequence:

>405_bases
ATGCGCAGGGCGGCTATACCCGGGCCGGCGCGTGCACGCCGGCGGCCGCGGGCAAGCTATGAGCGTCATCCTACGCGCTC
GCAAAAGGGAGGGATTGGGACCGTGCGTGTTCGGCAGCGGTTGTTCAGCTTGATGCTCGCCCTCGTCCTGGCCGTCGGCG
CGGTTACGGTGAGCGGGTGCATGCCGCAGCAGCAGCCCGAGTCCCAGCAGCAGCACAGCCAGGGAGGGGGAGAGGATCGG
GAGAAGCAGGAACGGGAGGAGGGCGAAAAGGACCAGGAGGAGAAGGAGACCGGCGGGGGGAAGGGAGGCAAGTCCGGCGG
CTCCGGGGGCTCGGGCCAGGGCGGGGGCCAGCAGCAGGGCGGCTCCGGTGGCGGCTCCCAGGACAGTACAGGCGGCAGCC
GATAG

Upstream 100 bases:

>100_bases
ACGTGTCCTTGGACATGGTGGTGGACGGATCCAGCAGACGCTTCAGCCCATCCCAGACGTTCACGCACACCCCTCCCGTT
TCCAGATGTAAGGTGCCCGC

Downstream 100 bases:

>100_bases
CGTGCGGGAAGGCCGTGCCACAGGGCAGGCCTTCCCGCTCTTTTGGATTCTCTGACAGGGACTTTGGCCGGTGCGGGCGA
AGTATCAGGAAAGGGTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRRAAIPGPARARRRPRASYERHPTRSQKGGIGTVRVRQRLFSLMLALVLAVGAVTVSGCMPQQQPESQQQHSQGGGEDR
EKQEREEGEKDQEEKETGGGKGGKSGGSGGSGQGGGQQQGGSGGGSQDSTGGSR

Sequences:

>Translated_134_residues
MRRAAIPGPARARRRPRASYERHPTRSQKGGIGTVRVRQRLFSLMLALVLAVGAVTVSGCMPQQQPESQQQHSQGGGEDR
EKQEREEGEKDQEEKETGGGKGGKSGGSGGSGQGGGQQQGGSGGGSQDSTGGSR
>Mature_134_residues
MRRAAIPGPARARRRPRASYERHPTRSQKGGIGTVRVRQRLFSLMLALVLAVGAVTVSGCMPQQQPESQQQHSQGGGEDR
EKQEREEGEKDQEEKETGGGKGGKSGGSGGSGQGGGQQQGGSGGGSQDSTGGSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13914; Mature: 13914

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRAAIPGPARARRRPRASYERHPTRSQKGGIGTVRVRQRLFSLMLALVLAVGAVTVSGC
CCCCCCCCHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPQQQPESQQQHSQGGGEDREKQEREEGEKDQEEKETGGGKGGKSGGSGGSGQGGGQQQG
CCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GSGGGSQDSTGGSR
CCCCCCCCCCCCCC
>Mature Secondary Structure
MRRAAIPGPARARRRPRASYERHPTRSQKGGIGTVRVRQRLFSLMLALVLAVGAVTVSGC
CCCCCCCCHHHHHCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
MPQQQPESQQQHSQGGGEDREKQEREEGEKDQEEKETGGGKGGKSGGSGGSGQGGGQQQG
CCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
GSGGGSQDSTGGSR
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA