Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893595

Identifier: 51893595

GI number: 51893595

Start: 2644188

End: 2644370

Strand: Reverse

Name: 51893595

Synonym: STH2457

Alternate gene names: NA

Gene position: 2644370-2644188 (Counterclockwise)

Preceding gene: 51893596

Following gene: 51893594

Centisome position: 74.15

GC content: 61.2

Gene sequence:

>183_bases
ATGTTTGGCCGCCTCGGCACCATGGAGATCCTGCTTATCGTCCTCGTCATTCTCCTGCTCTTCGGCGGCGCCAAGCTGCC
GCAGCTGGCGCGCGGGCTGGGGGATTCGATCAAGGAGTTCCGCAAGGCGGTCAAGCAGGACGACGACAAGAACGTTTCGG
ACAAGGAGAAGGAGCAGGAGTAG

Upstream 100 bases:

>100_bases
GCTGAACCGTTCGCCTCCTGCGGGGCTGCAGGAGAAACGCCCCCGCACCCCGAACCTTCGTGAGGTATGCCGTAGATTAC
GCAGCAGGGAGGAATCGCGC

Downstream 100 bases:

>100_bases
GCGCGGGCAGACTACGGACGTCTGCTCGTACCGCCCCGCCTGTCCGCCCAAGGAGGCCCCGACGTGCTCTGGATACTGCA
GCTGCTCGCCGGCGCGCTGC

Product: putative Sec-independent protein translocase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE

Sequences:

>Translated_60_residues
MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE
>Mature_60_residues
MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE

Specific function: Unknown

COG id: COG1826

COG function: function code U; Sec-independent protein secretion pathway components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6716; Mature: 6716

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA