| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
Click here to switch to the map view.
The map label for this gene is 51893595
Identifier: 51893595
GI number: 51893595
Start: 2644188
End: 2644370
Strand: Reverse
Name: 51893595
Synonym: STH2457
Alternate gene names: NA
Gene position: 2644370-2644188 (Counterclockwise)
Preceding gene: 51893596
Following gene: 51893594
Centisome position: 74.15
GC content: 61.2
Gene sequence:
>183_bases ATGTTTGGCCGCCTCGGCACCATGGAGATCCTGCTTATCGTCCTCGTCATTCTCCTGCTCTTCGGCGGCGCCAAGCTGCC GCAGCTGGCGCGCGGGCTGGGGGATTCGATCAAGGAGTTCCGCAAGGCGGTCAAGCAGGACGACGACAAGAACGTTTCGG ACAAGGAGAAGGAGCAGGAGTAG
Upstream 100 bases:
>100_bases GCTGAACCGTTCGCCTCCTGCGGGGCTGCAGGAGAAACGCCCCCGCACCCCGAACCTTCGTGAGGTATGCCGTAGATTAC GCAGCAGGGAGGAATCGCGC
Downstream 100 bases:
>100_bases GCGCGGGCAGACTACGGACGTCTGCTCGTACCGCCCCGCCTGTCCGCCCAAGGAGGCCCCGACGTGCTCTGGATACTGCA GCTGCTCGCCGGCGCGCTGC
Product: putative Sec-independent protein translocase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE
Sequences:
>Translated_60_residues MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE >Mature_60_residues MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE
Specific function: Unknown
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6716; Mature: 6716
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MFGRLGTMEILLIVLVILLLFGGAKLPQLARGLGDSIKEFRKAVKQDDDKNVSDKEKEQE CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA