Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893502

Identifier: 51893502

GI number: 51893502

Start: 2554411

End: 2555640

Strand: Reverse

Name: 51893502

Synonym: STH2364

Alternate gene names: NA

Gene position: 2555640-2554411 (Counterclockwise)

Preceding gene: 51893504

Following gene: 51893501

Centisome position: 71.66

GC content: 72.93

Gene sequence:

>1230_bases
ATGGTCGGCGCAGGCTACACGTCTTTCCGTAAACGGAAAAGCCCCTTGCCGGTAGGCAGGGGGCTGTTTGCATTTGCCCG
GGTGCAGGCGCCGCCCGGCGGCGGTACATGCCCGACGAGGGAGGAACGGTCTGAAATGCGCGACGCGAGATGCGTGCAGT
GTGAACGGTACGCGCAGAACCAATGGCTGGGGCGGGAGAGGCGCACCGGCGGCGTGGTGGAGCTGGCGCGCCACCTGGTC
GGGATCCAGAGCCAGCTCCGCACCACGCCGGACCTGGCCGCCAGGGCCAGGCTCGCCGGCGCCCGCCCGGGGGACGTCCG
GCGCGAGCTGGAGGAGACGCGGCGGCTGGTGCGGACCTGGACGGTGCGGGGGACCCTGCACGTTGTGGCTGCGGAGGACC
TGCCGCTGCTCTGGCGGGCGCTGCGGCCCGAGTGGGAGTCCCGCTGGAGCAAGTACCTGGACAAGCACGTCACCCGTGTG
CAGCGGGAGGCGGCCGCGGCGGCCTGCCTGCAGATCCTCGCGCGGGGGCCTGCCACCCGGGCGGAGTTGCTGGAGGGCGC
GCAGCAGATCCTGGGATGCCGGGACGAGTGGGTGGCGTATCTCTTCTCTTCGTGGGGAGGGGTGCTGAAGGACCTGGCGT
ACGCCGGCCGGGTGGTGTACGGCCCCGAGCGGGATGGGGAGGTTCAGTTCGTGCGGACCGAGGACTGGCTGGACCTGCCG
GTCGCGGACATGGATCCGGACGACGCCCTGGCGGTGCTGCTGGAGCGGTACCTGCGGGCGTACAGCCCCGCCCGGATTCA
GGACTTCGCCCACTGGAGCGGCGTCTCGGTGCGGCGCGCCCGGGAGGCCCTGACCCGGCTGGGCGGCCGGGTGGCGGTGC
GGGACGGCTGGCTGGTCCCGGAAGGGGAGGGCGGCGGTTCCTGTGCCCCGGACCGGCAGGCCGGTGGTCCTGGTGCGGAC
GCGGGTTGCGTGCGCCTGTTGCCCAAGTTCGACCCCTTCCTCCTGGCCCACGCCGACAAATTCTACCTGGACGAGGACCA
CTACAAGGCGGTCTTCCGGGCCGCGGCGGACGTGGCCGCGGTGATCCTGAGCGGCGGTCGCGTCATCGGGACCTGGCGGG
CGGAGGGCTCGCGGGTGGTCCCGGCGTTGTTCGGGCCCGTCGATGACGCGGCGGCCGCCGAGCTGGCGCAGGAGGTGGAG
GCGGTCTCGGCCTGGCTCCGGCAGGGGTGA

Upstream 100 bases:

>100_bases
GAAGCGGGGCGATCAAGACTAGACTGCAAATTATCCGTAGGGTAAGCTATTATCATGAGGGCGGGACCCTAGGGGGCCCA
GCTTTGCTACTGGTTGCAGC

Downstream 100 bases:

>100_bases
CGGCCATCGTCGACGCGCGATCGCTGCCGTTCACCTGCTGGCGATGGCCCGGAAGGGCCCGCTTCGGGTGCCGATTCTTC
CATCCTGGGGGGAGAACCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MVGAGYTSFRKRKSPLPVGRGLFAFARVQAPPGGGTCPTREERSEMRDARCVQCERYAQNQWLGRERRTGGVVELARHLV
GIQSQLRTTPDLAARARLAGARPGDVRRELEETRRLVRTWTVRGTLHVVAAEDLPLLWRALRPEWESRWSKYLDKHVTRV
QREAAAAACLQILARGPATRAELLEGAQQILGCRDEWVAYLFSSWGGVLKDLAYAGRVVYGPERDGEVQFVRTEDWLDLP
VADMDPDDALAVLLERYLRAYSPARIQDFAHWSGVSVRRAREALTRLGGRVAVRDGWLVPEGEGGGSCAPDRQAGGPGAD
AGCVRLLPKFDPFLLAHADKFYLDEDHYKAVFRAAADVAAVILSGGRVIGTWRAEGSRVVPALFGPVDDAAAAELAQEVE
AVSAWLRQG

Sequences:

>Translated_409_residues
MVGAGYTSFRKRKSPLPVGRGLFAFARVQAPPGGGTCPTREERSEMRDARCVQCERYAQNQWLGRERRTGGVVELARHLV
GIQSQLRTTPDLAARARLAGARPGDVRRELEETRRLVRTWTVRGTLHVVAAEDLPLLWRALRPEWESRWSKYLDKHVTRV
QREAAAAACLQILARGPATRAELLEGAQQILGCRDEWVAYLFSSWGGVLKDLAYAGRVVYGPERDGEVQFVRTEDWLDLP
VADMDPDDALAVLLERYLRAYSPARIQDFAHWSGVSVRRAREALTRLGGRVAVRDGWLVPEGEGGGSCAPDRQAGGPGAD
AGCVRLLPKFDPFLLAHADKFYLDEDHYKAVFRAAADVAAVILSGGRVIGTWRAEGSRVVPALFGPVDDAAAAELAQEVE
AVSAWLRQG
>Mature_409_residues
MVGAGYTSFRKRKSPLPVGRGLFAFARVQAPPGGGTCPTREERSEMRDARCVQCERYAQNQWLGRERRTGGVVELARHLV
GIQSQLRTTPDLAARARLAGARPGDVRRELEETRRLVRTWTVRGTLHVVAAEDLPLLWRALRPEWESRWSKYLDKHVTRV
QREAAAAACLQILARGPATRAELLEGAQQILGCRDEWVAYLFSSWGGVLKDLAYAGRVVYGPERDGEVQFVRTEDWLDLP
VADMDPDDALAVLLERYLRAYSPARIQDFAHWSGVSVRRAREALTRLGGRVAVRDGWLVPEGEGGGSCAPDRQAGGPGAD
AGCVRLLPKFDPFLLAHADKFYLDEDHYKAVFRAAADVAAVILSGGRVIGTWRAEGSRVVPALFGPVDDAAAAELAQEVE
AVSAWLRQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45101; Mature: 45101

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGAGYTSFRKRKSPLPVGRGLFAFARVQAPPGGGTCPTREERSEMRDARCVQCERYAQN
CCCCCCHHHHHCCCCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QWLGRERRTGGVVELARHLVGIQSQLRTTPDLAARARLAGARPGDVRRELEETRRLVRTW
HHCCCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TVRGTLHVVAAEDLPLLWRALRPEWESRWSKYLDKHVTRVQREAAAAACLQILARGPATR
EECCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AELLEGAQQILGCRDEWVAYLFSSWGGVLKDLAYAGRVVYGPERDGEVQFVRTEDWLDLP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCC
VADMDPDDALAVLLERYLRAYSPARIQDFAHWSGVSVRRAREALTRLGGRVAVRDGWLVP
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCEEEE
EGEGGGSCAPDRQAGGPGADAGCVRLLPKFDPFLLAHADKFYLDEDHYKAVFRAAADVAA
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHH
VILSGGRVIGTWRAEGSRVVPALFGPVDDAAAAELAQEVEAVSAWLRQG
HHHCCCEEEEEEECCCCEECHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVGAGYTSFRKRKSPLPVGRGLFAFARVQAPPGGGTCPTREERSEMRDARCVQCERYAQN
CCCCCCHHHHHCCCCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QWLGRERRTGGVVELARHLVGIQSQLRTTPDLAARARLAGARPGDVRRELEETRRLVRTW
HHCCCHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TVRGTLHVVAAEDLPLLWRALRPEWESRWSKYLDKHVTRVQREAAAAACLQILARGPATR
EECCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
AELLEGAQQILGCRDEWVAYLFSSWGGVLKDLAYAGRVVYGPERDGEVQFVRTEDWLDLP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCC
VADMDPDDALAVLLERYLRAYSPARIQDFAHWSGVSVRRAREALTRLGGRVAVRDGWLVP
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEECCEEEE
EGEGGGSCAPDRQAGGPGADAGCVRLLPKFDPFLLAHADKFYLDEDHYKAVFRAAADVAA
CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCHHCCCCHHHHHHHHHHHHHHH
VILSGGRVIGTWRAEGSRVVPALFGPVDDAAAAELAQEVEAVSAWLRQG
HHHCCCEEEEEEECCCCEECHHHHCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA