Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893472

Identifier: 51893472

GI number: 51893472

Start: 2521293

End: 2522492

Strand: Reverse

Name: 51893472

Synonym: STH2334

Alternate gene names: NA

Gene position: 2522492-2521293 (Counterclockwise)

Preceding gene: 51893473

Following gene: 51893471

Centisome position: 70.73

GC content: 73.42

Gene sequence:

>1200_bases
GTGCGGAGCGCCGTCCGGCCTCGGGGGCCGGACGCCCGGCGGCGCGGCCCGCACAGGGCAGGAGAGGGATCGCCCGCCGT
AGTAATGACAAGAGAGCGCACGGCGAGAGGAGGGGCGTGTATGAGGGGAGCGCGTCTTGTGGGTCTGCTCTGCCTCATGG
CCCTGCTTCTGGCGGTGCCGGCGCCCCGGGCGCAGGTCGCGGGCGCCGCCGGCCAGGACCGCGCGGCGGTGCTGCAGGAG
CTATTCGTCCTCAACCGCCGGCTGGAGGAGGCGCGCGCCGCCCTCGCCGACGTGGAGGCGCGCCTGCGCGCGGTCTCGTC
CCAGGAGGAGGCGGCCCTCGCCGACCTGGCCCGCCTGCAGGAGGAGCTGGCCGCCCGCAGGGAGCAGTACGGCCGTCGGC
TCCGGTACTATCGGGAGCAGGGCAACCGGGGCCCGTGGGTGCTGCTGCTTACCGCCGGGTCGCTGGCGGATTTCCTCTGG
CGGCTGGACGCGCTGAAGCAGATCATGGACTACGACGCCCGCCTGGCCCGGGTGCTCATGGAGACGCAGGCGGCGGTGGC
GGCCCAGGCGGAGCGGCTGGCGCAGGCCCGGGCCGAGGCCGACCGGCTGCGGGACGAGCAGCTCGCCCGGGTGGCGGAGC
TGGAGGCGGCCATCGCAGACCGTGAGGCGATCCTGGCGGGCCTCGGCGACGAGCGTGCCGAGGTGGAGGAAGCCCTGGCG
GCGGTGGAGGCCGACTGGCAGCAGAGCGCCATGCCTGTCCTGGACGCCCTCGGGCAGGCTCTGCAGCAGTTGGGCACCGC
GGGTCTCCAGCCCGACGACCTCCGCTTCTCCCTGTTCCCGCCGAGCGCGGTGGCCACCATCACCGAGGAGCAGCTCAACG
CCTACATCGGCGGCTACGACGCGCTCGCCGGCCTGCGTGTGGACCTGGTGGGGGAGGAGGAGGCCTTCGTGCTCTCCGGG
ACGTTCGCGGACGTACCGGTGGAGATCAGCGGCGGCTTCCTGGTGCTGCCCGACGGCAGGCTGCGGTTCGAGCCCTCGTT
GATGCAGGTGCGCGAGTTCCGGGTGCCTGAAGGCGTCATCGCCGAGATCGTGTCCCAGGGTCTGCTGGACATCGACGTGA
GCTCCCTGGTGGCGCCGCTTACGCTCACCGGGGTCGAGCTGACCGACGGGCGGATGACCGTCCGGGCCGGCCTGAGATGA

Upstream 100 bases:

>100_bases
CGGGGGCAACGACTGAGCCGGGAAGGTCAACCTGACGGGCGAGTGTGGGGCGCTGCACCTCTGATGCGGCGCCCCGCTGC
GCGCCGCCGTCCGGAGCGCC

Downstream 100 bases:

>100_bases
GCGGTCGGCGGACCCCTGACGCTTAGAATTATGGAAGAGCCGGGTCTCCCTCAGCGGAGCCCGGTTCTTTTGTGTCGGCC
CGGCCGAGCCTGCCGATGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVPAPRAQVAGAAGQDRAAVLQE
LFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQEELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLW
RLDALKQIMDYDARLARVLMETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA
AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYDALAGLRVDLVGEEEAFVLSG
TFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVIAEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR

Sequences:

>Translated_399_residues
MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVPAPRAQVAGAAGQDRAAVLQE
LFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQEELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLW
RLDALKQIMDYDARLARVLMETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA
AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYDALAGLRVDLVGEEEAFVLSG
TFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVIAEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR
>Mature_399_residues
MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVPAPRAQVAGAAGQDRAAVLQE
LFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQEELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLW
RLDALKQIMDYDARLARVLMETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA
AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYDALAGLRVDLVGEEEAFVLSG
TFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVIAEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR

Specific function: Unknown

COG id: COG3883

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43203; Mature: 43203

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVP
CCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
APRAQVAGAAGQDRAAVLQELFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQ
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
EELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLWRLDALKQIMDYDARLARVLM
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHH
ALAGLRVDLVGEEEAFVLSGTFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVI
HHHCCEEEEECCCCEEEEECCCCCCCEEECCCEEEECCCCEEECHHHHHHHHHCCCHHHH
AEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR
HHHHHCCCHHCCHHHHHHHHEEECEEEECCCEEEECCCC
>Mature Secondary Structure
MRSAVRPRGPDARRRGPHRAGEGSPAVVMTRERTARGGACMRGARLVGLLCLMALLLAVP
CCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
APRAQVAGAAGQDRAAVLQELFVLNRRLEEARAALADVEARLRAVSSQEEAALADLARLQ
CCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
EELAARREQYGRRLRYYREQGNRGPWVLLLTAGSLADFLWRLDALKQIMDYDARLARVLM
HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETQAAVAAQAERLAQARAEADRLRDEQLARVAELEAAIADREAILAGLGDERAEVEEALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AVEADWQQSAMPVLDALGQALQQLGTAGLQPDDLRFSLFPPSAVATITEEQLNAYIGGYD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCHH
ALAGLRVDLVGEEEAFVLSGTFADVPVEISGGFLVLPDGRLRFEPSLMQVREFRVPEGVI
HHHCCEEEEECCCCEEEEECCCCCCCEEECCCEEEECCCCEEECHHHHHHHHHCCCHHHH
AEIVSQGLLDIDVSSLVAPLTLTGVELTDGRMTVRAGLR
HHHHHCCCHHCCHHHHHHHHEEECEEEECCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA