Click here to switch to the map view.

The map label for this gene is yfbK [H]

Identifier: 51893456

GI number: 51893456

Start: 2503540

End: 2504784

Strand: Reverse

Name: yfbK [H]

Synonym: STH2318

Alternate gene names: 51893456

Gene position: 2504784-2503540 (Counterclockwise)

Preceding gene: 51893457

Following gene: 51893454

Centisome position: 70.24

GC content: 73.25

Gene sequence:

>1245_bases
ATGACCCAGGCGCTTACGCTCTGCACCCAGCTGGACCGCACCTGCATCAGCCCGTCCGGCGGGGAAGTCTACCTGCTCGT
CACCGTGAAGGCGCCGCGGATGCCGGCGCCGGAGGGCCGGCCGCCGCTCAACCTCGCGGCGGTGGTGGACCGCTCCGGTT
CCATGGCCGGGGCTGCGCTCTACTTCACCAAACAGGCCCTGCGCTTCCTGGTCGACCAGATGGCCGAGGAGGACCGGCTG
GCGATCGTCACCTACGACGACCAGGTCCACGTGCCGTTCCCCAGCCAGCCAGTCGTCCAGAAGGACGCCGTGAGGCTCCT
GGTGGACGGCATCACCGCGGGCGGCACCACCAACCTGAGCGGCGGCCTGGCGACGGGTATGCAGCAGATCCGGCCGCACG
CGGGGCCGGGGCGGGTCAGCCGCGTGCTGCTCATGACCGACGGGCTGGCCAACGTCGGCGTGACCGATCCCGACGTGCTG
GCGGGATGGGCCAGGGCATGGCGGGAGAAGGGGCTCGCCGTCAGCACGATGGGGGTTGGCCCGCACTTCAGCGAGGACCT
GCTGGTGGCCCTGGCGGAGGCGGGCGGCGGCAACTTCCACTACATCGCGAACCCCGACCAGATCCCCCGCATCTTTCAGG
AGGAGCTGCACGGGCTGCTGCAGGTGGCCGTCCAGGGGCTGCACCTGATCATCGAGACGGAATCCGGCGTGGCGGTGAGC
GGGGTGCTGGGGTATCGGTCGCAGGGAACCCCGCTCCGGGCGGCGCTTTCGCTCCCCGACCTGTACGCCGGCGAGGTGAA
GCACGTCCTGGTGCGGCTGTCGGTGGCCGCGCCGCCGGCCGGCGGGAAGCTGGGGCGGGTGGCGCTCCACTACCTGCCCG
CGGCTGCCGGGGGCCGGCCCGGCACGCTGGAGGCTGACGTGTCGCTGGAGGTCACGGACGACCCCGCGCGCCTCGGCGAG
CCGCCGGACGAGACGGTGATGCGCCAGTTGCGGCTCAGCCAGGCCGGTGCGGCCTGGGACGAGGCGGTGGAACTGGCCGA
CGGCGGTGACCTGCAGGGGGCGGCTATGCGGCTCTTCGCGGCCGCAGAGGCCCTGGAGGCGGAGGCTGCCGGGGGCGACA
GCCATGCGCTGGAGCAGGCCAGGGCCCTGCGGGCCCAGGCGGAGGCCATCGCCGCCGCCCCGTACGACACCGACGTGCGC
AAGCGCATGCGCCAGGAAGGCTTGCGCCGGCGCCGGGGACGGTAG

Upstream 100 bases:

>100_bases
GCTGGCACGGTGCGGAGGACGTGCGCATTCTGCAGCGCGGGTAGTGACATCACGCTGTCACCCCCCTGCGCGACCCTGGG
TGCGGAGGGAGGTCGATCGC

Downstream 100 bases:

>100_bases
GGGGGCGCGCCACAGGGGCCCGCGTCTGCCGCAGGCCCCTGCGCGCAACGGTATCTGTCCGGGCTCGCCCGGACTACCAG
CGCTTGCCCCACTTCCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTQALTLCTQLDRTCISPSGGEVYLLVTVKAPRMPAPEGRPPLNLAAVVDRSGSMAGAALYFTKQALRFLVDQMAEEDRL
AIVTYDDQVHVPFPSQPVVQKDAVRLLVDGITAGGTTNLSGGLATGMQQIRPHAGPGRVSRVLLMTDGLANVGVTDPDVL
AGWARAWREKGLAVSTMGVGPHFSEDLLVALAEAGGGNFHYIANPDQIPRIFQEELHGLLQVAVQGLHLIIETESGVAVS
GVLGYRSQGTPLRAALSLPDLYAGEVKHVLVRLSVAAPPAGGKLGRVALHYLPAAAGGRPGTLEADVSLEVTDDPARLGE
PPDETVMRQLRLSQAGAAWDEAVELADGGDLQGAAMRLFAAAEALEAEAAGGDSHALEQARALRAQAEAIAAAPYDTDVR
KRMRQEGLRRRRGR

Sequences:

>Translated_414_residues
MTQALTLCTQLDRTCISPSGGEVYLLVTVKAPRMPAPEGRPPLNLAAVVDRSGSMAGAALYFTKQALRFLVDQMAEEDRL
AIVTYDDQVHVPFPSQPVVQKDAVRLLVDGITAGGTTNLSGGLATGMQQIRPHAGPGRVSRVLLMTDGLANVGVTDPDVL
AGWARAWREKGLAVSTMGVGPHFSEDLLVALAEAGGGNFHYIANPDQIPRIFQEELHGLLQVAVQGLHLIIETESGVAVS
GVLGYRSQGTPLRAALSLPDLYAGEVKHVLVRLSVAAPPAGGKLGRVALHYLPAAAGGRPGTLEADVSLEVTDDPARLGE
PPDETVMRQLRLSQAGAAWDEAVELADGGDLQGAAMRLFAAAEALEAEAAGGDSHALEQARALRAQAEAIAAAPYDTDVR
KRMRQEGLRRRRGR
>Mature_413_residues
TQALTLCTQLDRTCISPSGGEVYLLVTVKAPRMPAPEGRPPLNLAAVVDRSGSMAGAALYFTKQALRFLVDQMAEEDRLA
IVTYDDQVHVPFPSQPVVQKDAVRLLVDGITAGGTTNLSGGLATGMQQIRPHAGPGRVSRVLLMTDGLANVGVTDPDVLA
GWARAWREKGLAVSTMGVGPHFSEDLLVALAEAGGGNFHYIANPDQIPRIFQEELHGLLQVAVQGLHLIIETESGVAVSG
VLGYRSQGTPLRAALSLPDLYAGEVKHVLVRLSVAAPPAGGKLGRVALHYLPAAAGGRPGTLEADVSLEVTDDPARLGEP
PDETVMRQLRLSQAGAAWDEAVELADGGDLQGAAMRLFAAAEALEAEAAGGDSHALEQARALRAQAEAIAAAPYDTDVRK
RMRQEGLRRRRGR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Synechocystis PCC 6803 sll0103 [H]

Homologues:

Organism=Homo sapiens, GI133925809, Length=174, Percent_Identity=31.6091954022989, Blast_Score=69, Evalue=8e-12,
Organism=Escherichia coli, GI1788606, Length=197, Percent_Identity=32.48730964467, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021908
- InterPro:   IPR022156
- InterPro:   IPR002035 [H]

Pfam domain/function: PF12034 DUF3520; PF00092 VWA; PF12450 vWF_A [H]

EC number: NA

Molecular weight: Translated: 43689; Mature: 43558

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQALTLCTQLDRTCISPSGGEVYLLVTVKAPRMPAPEGRPPLNLAAVVDRSGSMAGAAL
CCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHH
YFTKQALRFLVDQMAEEDRLAIVTYDDQVHVPFPSQPVVQKDAVRLLVDGITAGGTTNLS
HHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
GGLATGMQQIRPHAGPGRVSRVLLMTDGLANVGVTDPDVLAGWARAWREKGLAVSTMGVG
CHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
PHFSEDLLVALAEAGGGNFHYIANPDQIPRIFQEELHGLLQVAVQGLHLIIETESGVAVS
CCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEE
GVLGYRSQGTPLRAALSLPDLYAGEVKHVLVRLSVAAPPAGGKLGRVALHYLPAAAGGRP
EEECCCCCCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCCCCC
GTLEADVSLEVTDDPARLGEPPDETVMRQLRLSQAGAAWDEAVELADGGDLQGAAMRLFA
CEEEEEEEEEECCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHH
AAEALEAEAAGGDSHALEQARALRAQAEAIAAAPYDTDVRKRMRQEGLRRRRGR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TQALTLCTQLDRTCISPSGGEVYLLVTVKAPRMPAPEGRPPLNLAAVVDRSGSMAGAAL
CHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHH
YFTKQALRFLVDQMAEEDRLAIVTYDDQVHVPFPSQPVVQKDAVRLLVDGITAGGTTNLS
HHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCC
GGLATGMQQIRPHAGPGRVSRVLLMTDGLANVGVTDPDVLAGWARAWREKGLAVSTMGVG
CHHHHHHHHHCCCCCCCHHEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC
PHFSEDLLVALAEAGGGNFHYIANPDQIPRIFQEELHGLLQVAVQGLHLIIETESGVAVS
CCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEE
GVLGYRSQGTPLRAALSLPDLYAGEVKHVLVRLSVAAPPAGGKLGRVALHYLPAAAGGRP
EEECCCCCCCCEEEEECCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHCCCCCCCC
GTLEADVSLEVTDDPARLGEPPDETVMRQLRLSQAGAAWDEAVELADGGDLQGAAMRLFA
CEEEEEEEEEECCCHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHH
AAEALEAEAAGGDSHALEQARALRAQAEAIAAAPYDTDVRKRMRQEGLRRRRGR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]