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The map label for this gene is ycaQ [H]

Identifier: 51893457

GI number: 51893457

Start: 2504841

End: 2506265

Strand: Reverse

Name: ycaQ [H]

Synonym: STH2319

Alternate gene names: 51893457

Gene position: 2506265-2504841 (Counterclockwise)

Preceding gene: 51893459

Following gene: 51893456

Centisome position: 70.28

GC content: 72.42

Gene sequence:

>1425_bases
GTGCGCGTTCGGGTCTCCAAGGCGGCCGCCCGCCGGTTCCTGCTGTATGCGCAGGGGTTGCTGGAGGTGCCCGGGGTCAT
TCAGCCCTGGGCGAAGGAGCTCAGGGGCCGGAGCGGCCTCCTGCGGGCGCTGGAGCGGCTGGAGGCGGTCCAGCTGGACC
CCATCGCCGTGGTGGAGCGCAACCACCACCTGGTCCTGCGCAACCGGGTCGGCGGCTACCGGCCGGAACACCTGGACGGG
CTGTTCGCCGCCGGGCAGGTGTTCGAATACCTGGCCAACGCCCGCTGCGTGCTGCCCATGCGGGACCTGCCGGACTTCTG
GCCGATCATGCTGGCTGCGCGGCAGCTTCCCGCCCGGGCGGCGCTGGCCGACGTCATGACCGACGTGCTGCGCCGCCTGT
ACCGGGAGGGGCCGCTGCCGCCCCGCGCCTTGGGGAACGACGGGCCGCGGCTGCTGGGGCTGGGCTACAACCCGCCGGAC
AAGGCGTCCAAGGCGTCGGGCCGGGCGATCGACCTCCTGTGGCTGGGCGGCGAGGTCTTCGTGGCCCGCCGGGAGGGCAA
CGAGAAGTGGTACGACCTGGCCGAACGGGTGATTCCCCGCAACGTGGCAGCGGACCTGCCTGGCGACTTCTCGAACCTCC
GGTCGCCGATGCTGCGGGCCCACGCCGGAGTTGGCGCGGAAGGCCAGGAAACCGGCCCCGAACGCGCCGGCGATTCCGCT
CATGGCGCAGGCGCGCGCGGGGAGGGCGGCGGCGGGGAAGGCGAGCGCCGCGCACTCCCTGGCGACAGCCCCGTCCTCAC
CGGGGTCGACGTCTCCCGTCCCTGGTCCACTCCGGACGTGGGCGCGGGCGAGGCCGAATGGCAGCGGTTCCTGCTGGACA
AGTACATGCGGGCCTACCGCCTGGTCGATCTGGGCGATTTCCGGTTCGGCTGGCAGAGCTACCCCTCGGCCCGGCGGCGG
GCCCTGGCGGCGGAGAAGGTGGCGAAGGGCGAGTGGGTCGAGGTGGAGGTCGACGGCGTGCGGCGGCGCTACTTCGCCCT
CGCGGAGGATCGGCCCTGCCTCGAGGTGGCCGGGGACTGGGAGCCGCGGCGGACCGTCCGCTTCCTGGCGCCGCTGGACA
ACCTGTTGTGGCGGCGCGAGCGGCTGCAGGACCTCTTCGACTTCGACTACACGTGGGAGGTCTACACCCCGGCCGCGAAG
CGCCGGTTCGGCTACTACGCCATGCCGATTCTCTACGGCGACAGGCTGATTGGACGGCTGGACCCGAAGCTGGACCGGGA
GAACGGGGTGCTGGTGGTGAACCGGCTGCAGCTGGAACTGGACGGGGTCGACCGCCGGGGGCTGGAGACTTCGCTGGAGA
AGGCCCTGTACGCGTTCGCCCGCTGGCACGGTGCGGAGGACGTGCGCATTCTGCAGCGCGGGTAG

Upstream 100 bases:

>100_bases
AAACAGTCCGCGGAAAGCAGGAACGGCTGTTCGATAAGGCGAACAGATTGGAGAAGCATGCCGAGGGTTACACCGGACAT
CGGCGAAGGGAGGAAGGCTC

Downstream 100 bases:

>100_bases
TGACATCACGCTGTCACCCCCCTGCGCGACCCTGGGTGCGGAGGGAGGTCGATCGCATGACCCAGGCGCTTACGCTCTGC
ACCCAGCTGGACCGCACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MRVRVSKAAARRFLLYAQGLLEVPGVIQPWAKELRGRSGLLRALERLEAVQLDPIAVVERNHHLVLRNRVGGYRPEHLDG
LFAAGQVFEYLANARCVLPMRDLPDFWPIMLAARQLPARAALADVMTDVLRRLYREGPLPPRALGNDGPRLLGLGYNPPD
KASKASGRAIDLLWLGGEVFVARREGNEKWYDLAERVIPRNVAADLPGDFSNLRSPMLRAHAGVGAEGQETGPERAGDSA
HGAGARGEGGGGEGERRALPGDSPVLTGVDVSRPWSTPDVGAGEAEWQRFLLDKYMRAYRLVDLGDFRFGWQSYPSARRR
ALAAEKVAKGEWVEVEVDGVRRRYFALAEDRPCLEVAGDWEPRRTVRFLAPLDNLLWRRERLQDLFDFDYTWEVYTPAAK
RRFGYYAMPILYGDRLIGRLDPKLDRENGVLVVNRLQLELDGVDRRGLETSLEKALYAFARWHGAEDVRILQRG

Sequences:

>Translated_474_residues
MRVRVSKAAARRFLLYAQGLLEVPGVIQPWAKELRGRSGLLRALERLEAVQLDPIAVVERNHHLVLRNRVGGYRPEHLDG
LFAAGQVFEYLANARCVLPMRDLPDFWPIMLAARQLPARAALADVMTDVLRRLYREGPLPPRALGNDGPRLLGLGYNPPD
KASKASGRAIDLLWLGGEVFVARREGNEKWYDLAERVIPRNVAADLPGDFSNLRSPMLRAHAGVGAEGQETGPERAGDSA
HGAGARGEGGGGEGERRALPGDSPVLTGVDVSRPWSTPDVGAGEAEWQRFLLDKYMRAYRLVDLGDFRFGWQSYPSARRR
ALAAEKVAKGEWVEVEVDGVRRRYFALAEDRPCLEVAGDWEPRRTVRFLAPLDNLLWRRERLQDLFDFDYTWEVYTPAAK
RRFGYYAMPILYGDRLIGRLDPKLDRENGVLVVNRLQLELDGVDRRGLETSLEKALYAFARWHGAEDVRILQRG
>Mature_474_residues
MRVRVSKAAARRFLLYAQGLLEVPGVIQPWAKELRGRSGLLRALERLEAVQLDPIAVVERNHHLVLRNRVGGYRPEHLDG
LFAAGQVFEYLANARCVLPMRDLPDFWPIMLAARQLPARAALADVMTDVLRRLYREGPLPPRALGNDGPRLLGLGYNPPD
KASKASGRAIDLLWLGGEVFVARREGNEKWYDLAERVIPRNVAADLPGDFSNLRSPMLRAHAGVGAEGQETGPERAGDSA
HGAGARGEGGGGEGERRALPGDSPVLTGVDVSRPWSTPDVGAGEAEWQRFLLDKYMRAYRLVDLGDFRFGWQSYPSARRR
ALAAEKVAKGEWVEVEVDGVRRRYFALAEDRPCLEVAGDWEPRRTVRFLAPLDNLLWRRERLQDLFDFDYTWEVYTPAAK
RRFGYYAMPILYGDRLIGRLDPKLDRENGVLVVNRLQLELDGVDRRGLETSLEKALYAFARWHGAEDVRILQRG

Specific function: Unknown

COG id: COG3214

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787145, Length=194, Percent_Identity=33.5051546391753, Blast_Score=92, Evalue=8e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009351 [H]

Pfam domain/function: PF06224 DUF1006 [H]

EC number: NA

Molecular weight: Translated: 53334; Mature: 53334

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVRVSKAAARRFLLYAQGLLEVPGVIQPWAKELRGRSGLLRALERLEAVQLDPIAVVER
CCEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEC
NHHLVLRNRVGGYRPEHLDGLFAAGQVFEYLANARCVLPMRDLPDFWPIMLAARQLPARA
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCHHH
ALADVMTDVLRRLYREGPLPPRALGNDGPRLLGLGYNPPDKASKASGRAIDLLWLGGEVF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCEEE
VARREGNEKWYDLAERVIPRNVAADLPGDFSNLRSPMLRAHAGVGAEGQETGPERAGDSA
EEEECCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
HGAGARGEGGGGEGERRALPGDSPVLTGVDVSRPWSTPDVGAGEAEWQRFLLDKYMRAYR
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVDLGDFRFGWQSYPSARRRALAAEKVAKGEWVEVEVDGVRRRYFALAEDRPCLEVAGDW
HCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCEEECCCC
EPRRTVRFLAPLDNLLWRRERLQDLFDFDYTWEVYTPAAKRRFGYYAMPILYGDRLIGRL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCEEEHHHHHCHHHHHC
DPKLDRENGVLVVNRLQLELDGVDRRGLETSLEKALYAFARWHGAEDVRILQRG
CCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCC
>Mature Secondary Structure
MRVRVSKAAARRFLLYAQGLLEVPGVIQPWAKELRGRSGLLRALERLEAVQLDPIAVVER
CCEECHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEEC
NHHLVLRNRVGGYRPEHLDGLFAAGQVFEYLANARCVLPMRDLPDFWPIMLAARQLPARA
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCHHH
ALADVMTDVLRRLYREGPLPPRALGNDGPRLLGLGYNPPDKASKASGRAIDLLWLGGEVF
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEECCEEE
VARREGNEKWYDLAERVIPRNVAADLPGDFSNLRSPMLRAHAGVGAEGQETGPERAGDSA
EEEECCCHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
HGAGARGEGGGGEGERRALPGDSPVLTGVDVSRPWSTPDVGAGEAEWQRFLLDKYMRAYR
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LVDLGDFRFGWQSYPSARRRALAAEKVAKGEWVEVEVDGVRRRYFALAEDRPCLEVAGDW
HCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCCCEEECCCC
EPRRTVRFLAPLDNLLWRRERLQDLFDFDYTWEVYTPAAKRRFGYYAMPILYGDRLIGRL
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCEEEHHHHHCHHHHHC
DPKLDRENGVLVVNRLQLELDGVDRRGLETSLEKALYAFARWHGAEDVRILQRG
CCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]