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The map label for this gene is yobV [H]

Identifier: 51893454

GI number: 51893454

Start: 2502159

End: 2503127

Strand: Reverse

Name: yobV [H]

Synonym: STH2316

Alternate gene names: 51893454

Gene position: 2503127-2502159 (Counterclockwise)

Preceding gene: 51893456

Following gene: 51893453

Centisome position: 70.19

GC content: 71.72

Gene sequence:

>969_bases
ATGGCCACCGGATCCGCAAGAGCCGCAGAGCGCCGCTTCCAGCTCCTCACGGTCCTGATGGGAGGCGGCAGGCCCCGGGT
GGATGAGCTGGCCCGGCGCTTCGGTGTGACGCGCCGGTCCGTCTTCCGGGACCTGGAGTTTCTGGAGCGCATGGGCGTGC
CCATCGTGCGGGACGGCGGCCGCTACGCGGTCCTCGACACCTTCAAGGTCCGGCCGATCCAGTTCCAGCCGGAGGAGGTC
CTGGCGCTCATGGCCGCGCTGGACTTCGGACAGCGGAAGCGTCCGGTGGGGGGGACGGCCGCCCGCAGCGCCTGGGAGAA
GCTGCTGGCGGTGTTGCCGGCGGCGCAGCAGGAGCTGGCCACCGGCCTCGACCGGACGCTGGTGGTGGATCCCATCCAGG
CCTACTCCCTCCCGCCGTCCCCGGACGTGGAGGCCGCCTGCCGCGCCGCGGTCGAGGGGCCGCACCCCCTCCGGATCCTG
TACCAGTCCCTCCACGCCGATGCGCCCGTCGAGCGGGTCGTCCGTCCCTACGGGATGGCTTACCGGGGCACGGCGCTCTA
CCTCATCGGCTTTTGCGAACTGCGCCGGGAGGTCCGGATCTTCCGGGCGAATCGCATCCTGGAGGCGCAGGTGCTCAGCA
CCACCTTCGAGCGGCCCCCGGACTTCGACCTGGAGCGGTTCCTGAGCGACGTCTGGGGCATCGAGTTCGGGCCGCTGATG
CACGTGCGGGTCCGGTTCGACCGGGAGGTGGCCAGGCTGGTGCGGGAGACGATCTGGCATCCTTCCCAGCGGCTGGAGGA
GGAGGAAGGCGGGGCGGTGATTCTCCGCATGGAAGCACGGGGCACGGGCGAACTCGCCCGCTGGCTGGCCGGTTTCGGCG
GCCGGGCGGAGGTGTTGGAGCCGCCGGAGCTGCGGCAGGCCGTACTCGAGCTGGGGCAGGGCATCGTGAGGCGCTACGGC
GGGGCGTAA

Upstream 100 bases:

>100_bases
TACATAACGCCCGGCAGGCGCAGATAGATCGGCGGCGTCATGGGACGGGACTCGCGCAGGTCACCGGGTGCAGCATTGCC
TTAGGTTGGAGGGATGAGCC

Downstream 100 bases:

>100_bases
GCGATCCTCGGCGGCGCTGGTGCGGGGCGGGCCCTGCCAGGCGCAGGAACAGGACCGGGGCCAGGTTCGGCGGCACGATG
CGCCGGACCTGGCCCTGCGC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MATGSARAAERRFQLLTVLMGGGRPRVDELARRFGVTRRSVFRDLEFLERMGVPIVRDGGRYAVLDTFKVRPIQFQPEEV
LALMAALDFGQRKRPVGGTAARSAWEKLLAVLPAAQQELATGLDRTLVVDPIQAYSLPPSPDVEAACRAAVEGPHPLRIL
YQSLHADAPVERVVRPYGMAYRGTALYLIGFCELRREVRIFRANRILEAQVLSTTFERPPDFDLERFLSDVWGIEFGPLM
HVRVRFDREVARLVRETIWHPSQRLEEEEGGAVILRMEARGTGELARWLAGFGGRAEVLEPPELRQAVLELGQGIVRRYG
GA

Sequences:

>Translated_322_residues
MATGSARAAERRFQLLTVLMGGGRPRVDELARRFGVTRRSVFRDLEFLERMGVPIVRDGGRYAVLDTFKVRPIQFQPEEV
LALMAALDFGQRKRPVGGTAARSAWEKLLAVLPAAQQELATGLDRTLVVDPIQAYSLPPSPDVEAACRAAVEGPHPLRIL
YQSLHADAPVERVVRPYGMAYRGTALYLIGFCELRREVRIFRANRILEAQVLSTTFERPPDFDLERFLSDVWGIEFGPLM
HVRVRFDREVARLVRETIWHPSQRLEEEEGGAVILRMEARGTGELARWLAGFGGRAEVLEPPELRQAVLELGQGIVRRYG
GA
>Mature_321_residues
ATGSARAAERRFQLLTVLMGGGRPRVDELARRFGVTRRSVFRDLEFLERMGVPIVRDGGRYAVLDTFKVRPIQFQPEEVL
ALMAALDFGQRKRPVGGTAARSAWEKLLAVLPAAQQELATGLDRTLVVDPIQAYSLPPSPDVEAACRAAVEGPHPLRILY
QSLHADAPVERVVRPYGMAYRGTALYLIGFCELRREVRIFRANRILEAQVLSTTFERPPDFDLERFLSDVWGIEFGPLMH
VRVRFDREVARLVRETIWHPSQRLEEEEGGAVILRMEARGTGELARWLAGFGGRAEVLEPPELRQAVLELGQGIVRRYGG
A

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 36167; Mature: 36036

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGSARAAERRFQLLTVLMGGGRPRVDELARRFGVTRRSVFRDLEFLERMGVPIVRDGG
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCC
RYAVLDTFKVRPIQFQPEEVLALMAALDFGQRKRPVGGTAARSAWEKLLAVLPAAQQELA
CEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHH
TGLDRTLVVDPIQAYSLPPSPDVEAACRAAVEGPHPLRILYQSLHADAPVERVVRPYGMA
HCCCCEEEECCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCE
YRGTALYLIGFCELRREVRIFRANRILEAQVLSTTFERPPDFDLERFLSDVWGIEFGPLM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEE
HVRVRFDREVARLVRETIWHPSQRLEEEEGGAVILRMEARGTGELARWLAGFGGRAEVLE
EEEEHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCC
PPELRQAVLELGQGIVRRYGGA
CHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATGSARAAERRFQLLTVLMGGGRPRVDELARRFGVTRRSVFRDLEFLERMGVPIVRDGG
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEECCC
RYAVLDTFKVRPIQFQPEEVLALMAALDFGQRKRPVGGTAARSAWEKLLAVLPAAQQELA
CEEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHH
TGLDRTLVVDPIQAYSLPPSPDVEAACRAAVEGPHPLRILYQSLHADAPVERVVRPYGMA
HCCCCEEEECCHHHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCCE
YRGTALYLIGFCELRREVRIFRANRILEAQVLSTTFERPPDFDLERFLSDVWGIEFGPLM
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEE
HVRVRFDREVARLVRETIWHPSQRLEEEEGGAVILRMEARGTGELARWLAGFGGRAEVLE
EEEEHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEEEEECCCCHHHHHHHHCCCCCCCCCC
PPELRQAVLELGQGIVRRYGGA
CHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]