| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893391
Identifier: 51893391
GI number: 51893391
Start: 2420076
End: 2421278
Strand: Reverse
Name: 51893391
Synonym: STH2253
Alternate gene names: NA
Gene position: 2421278-2420076 (Counterclockwise)
Preceding gene: 51893392
Following gene: 51893390
Centisome position: 67.9
GC content: 63.01
Gene sequence:
>1203_bases ATGGGGGAGTGGGAACCGATGAAGGGGGATCACACACGCCGTGCCAGGTGGCTGGCCTGGCTGATGCTCGCGGCGCTGCT CGTGCACGGGCCGGTGGGGGCAGGAGCGGAGGAGCCGCTGCAGCCGGAGGTGGCGGAGTACCCGGCTGAGAACTACGAAC CCGGTCCGGGATGGCCGGAGGGCTGGACGCCGCCGCCCCCGCCCGAGGGCATGTCGGAGCAGATGCGGGCGGAGGTGGAA CAGGCGCTCCGGGACAATCCGGATATGTATGATCGGTACGACTGGTGGGTGTGGGATCCGCTTCCTGCCTGGACCCAGGA GTATCCCTGGTACTGGGAGGAGGACTGGATGGTCTGCGGGACGACGATCCACGTGTACGCCTATCCGAAGCCGGATACGC ATTTGATCCAGCAGGTCTTCGGCCGGTCGTACGTCGTGGGGCGGCTGCACCTGAAGCCGTGCAGGTACGAGCCCATGCAG TACATCGTGGCCGTACGGGAGTTGAGTGAGGAGGAGAAGTTGGCCGAGGGGCGCGGCATCGAGTACGAATACTGGATGGA CAAGTCTCACCCTGGGCTGGGCCGAGACTATGGATACCGGCATAACGGAAGCCCGGAGGAGATCTTTGTCTTCCTCAACT TCGGCAACGCCAGCAGCCACTTTGACACTCCAGCTTATCTTGACACCACCGTCAACCGGGTTCGGGTACCCATCCGGTTC ATCAGCGAGATGATGGGGGCGGAGGTCACCTGGGACCAGGCCGGGCGGCGGGTGACCATTCATTTCCCGGCAGTTACCCG TGAAGTAGTGAAAGCTGTGCCTGCGCCTGGATACGACTATCCCGACCTGATCCACCCCGAGACACACCTGCCCGACCCAT ACCGGTACCTGTTGCAGGAACAGACGGTGAGTGTACCCGAGCGAACCATCGTGCTGACGATCGATCACCCAGTGGCGGTG GTAGACGGGCACGAGGTGGCCTTAGACGCCCCGCCGGTGATCCGGAACGACCGAACGATGGTGCCTGTCCGCTTCATAGC TGAGCAGATGGGTGCCAAAGTCTACTGGGTCGGGGCCGAACCCATCTACCGGCTCGACGATGGGACCATGTCAGGCAGGT ACCAGGTTCACATCTTCACGCCGTTCTTCCCCCTGTACGAGTACCCCAGCTGGTACCTGGAGAATCGCGCGGTGAGGTAC TAA
Upstream 100 bases:
>100_bases GTGCTCGAGGGAGCGGCGAGTCCGCCGTGACGCCCCTGCCGTTCCCCCGGGCAAACCTCTGCCCGGGGGTTTTCGTATTG GTTATGGGAGAACGAACAAC
Downstream 100 bases:
>100_bases GGGGGAGCTGGAATTATGAACTGGCGACGCTGGTTTGCGGGGGTCCTGGCCTGCTTGCTTGCCATGGTACCCAGTCCCGT CGTTGTCGCGGGGGACTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MGEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSEQMRAEVE QALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCGTTIHVYAYPKPDTHLIQQVFGRSYVVGRLHLKPCRYEPMQ YIVAVRELSEEEKLAEGRGIEYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFLNFGNASSHFDTPAYLDTTVNRVRVPIRF ISEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYRYLLQEQTVSVPERTIVLTIDHPVAV VDGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY
Sequences:
>Translated_400_residues MGEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSEQMRAEVE QALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCGTTIHVYAYPKPDTHLIQQVFGRSYVVGRLHLKPCRYEPMQ YIVAVRELSEEEKLAEGRGIEYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFLNFGNASSHFDTPAYLDTTVNRVRVPIRF ISEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYRYLLQEQTVSVPERTIVLTIDHPVAV VDGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY >Mature_399_residues GEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPEGWTPPPPPEGMSEQMRAEVEQ ALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCGTTIHVYAYPKPDTHLIQQVFGRSYVVGRLHLKPCRYEPMQY IVAVRELSEEEKLAEGRGIEYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFLNFGNASSHFDTPAYLDTTVNRVRVPIRFI SEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYRYLLQEQTVSVPERTIVLTIDHPVAVV DGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAEPIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46502; Mature: 46371
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPE CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC GWTPPPPPEGMSEQMRAEVEQALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCCCCEECCCEEEEC TTIHVYAYPKPDTHLIQQVFGRSYVVGRLHLKPCRYEPMQYIVAVRELSEEEKLAEGRGI CEEEEEEECCCCHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC EYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFLNFGNASSHFDTPAYLDTTVNRVRVPIRF EEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEHHHHH ISEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYRYLLQE HHHHHCCEEEHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH QTVSVPERTIVLTIDHPVAVVDGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAE HHCCCCCEEEEEEECCCEEEECCCEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEEECCC PIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY CEEEECCCCCCCEEEEEEECCCHHHHCCCCHHHCCCCCCC >Mature Secondary Structure GEWEPMKGDHTRRARWLAWLMLAALLVHGPVGAGAEEPLQPEVAEYPAENYEPGPGWPE CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC GWTPPPPPEGMSEQMRAEVEQALRDNPDMYDRYDWWVWDPLPAWTQEYPWYWEEDWMVCG CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHCCCCCEECCCEEEEC TTIHVYAYPKPDTHLIQQVFGRSYVVGRLHLKPCRYEPMQYIVAVRELSEEEKLAEGRGI CEEEEEEECCCCHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCC EYEYWMDKSHPGLGRDYGYRHNGSPEEIFVFLNFGNASSHFDTPAYLDTTVNRVRVPIRF EEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEHHHHH ISEMMGAEVTWDQAGRRVTIHFPAVTREVVKAVPAPGYDYPDLIHPETHLPDPYRYLLQE HHHHHCCEEEHHHCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH QTVSVPERTIVLTIDHPVAVVDGHEVALDAPPVIRNDRTMVPVRFIAEQMGAKVYWVGAE HHCCCCCEEEEEEECCCEEEECCCEEEECCCCCCCCCCCEEHHHHHHHHHCCEEEEECCC PIYRLDDGTMSGRYQVHIFTPFFPLYEYPSWYLENRAVRY CEEEECCCCCCCEEEEEEECCCHHHHCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA