Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893390

Identifier: 51893390

GI number: 51893390

Start: 2417538

End: 2420060

Strand: Reverse

Name: 51893390

Synonym: STH2252

Alternate gene names: NA

Gene position: 2420060-2417538 (Counterclockwise)

Preceding gene: 51893391

Following gene: 51893389

Centisome position: 67.86

GC content: 69.08

Gene sequence:

>2523_bases
ATGAACTGGCGACGCTGGTTTGCGGGGGTCCTGGCCTGCTTGCTTGCCATGGTACCCAGTCCCGTCGTTGTCGCGGGGGA
CTGGATCACGAAGGGTGGTTCTCCGCAGCGCACGTCGACAGTCCTCGACCCTCACGGCCTGATTGAGTTGAGTCCGTACT
GGGAAACGGAGGCGTTGGGGGAGAGTGCGGCCCAACCGGCGGTCGTCGATGGAGTCATCTACCATCTGGCAGGGCCCTAC
CTCTGGAGGCTGGAGTTGGACGACCTTCAACGACCGGTTGGCGAAGCCGTCGCGGTCAGTGATCCGGTGAAGCGAAAGGG
AGTCGAGTTCAACGTGGCGCCTGGAGGCGCGTTCATCGCCCCGCAGTCCAGCCCTAGCTACAGTCCGGAGACCGGTATCC
TCTATTTTGGCACGGGCTATGGTTGGCTCTGGGCGTACCACACGAGAGAAGGTTGGTTTCGGCCTGCTGAACTGGACTTA
GGCTGTCCTGTTGTGGGCTCGCCGGTCGTCATTCACGACCAGGGACGGGACATCGTCGTGGTCGCTGACCGACCCAACTA
CCCCGGCGAGGAAAACCGGCCAGAAGGACGACCGCTGTGTCCCAGGGGGCATGGGAAGGTCTGGGTAATCCGAGCGTTGG
ATGACCTGGACCGCGTTCCAGAGGTGCACCACTACGAAGCGGCTACGACGAAACAAGATGAAAGCGGCTTCGGCGGCTTC
ATCACGCCCTCCGCCGTCATGGCTCCGCCCCACGGGAGCAACCCCAGCTTTGTCATCGGCACCGATGGCTTTGAGGGAGG
GCGCGCGCTGCGGCTGGCCCTGGACCGCGACAACGACTATCGCCCTTACCGGGTCTGGACAGTCGACAGTACCGCCGGCT
TCGCCGGCAACTTCACCTCAGACGGCACCCACGCGTACTGGTTGGACACCCGGGGGCGCCTCTGGGGCGCCAATCTGCAT
GACGGGCTGGAGCCCGCCGGCTGGAAAGGGCACATGGTCGACGTCCCCGCCCTCATCGGCGCCAGGAACGCCTTCACCAA
CACCGAACCCGCGGTCGAGGTCCGCCAGACCCCCGACGGCCCCGAAACCCACCTCTACGTCACCCTCCGCAACTACACCG
ACACCGGCGCGGGCCTCCGGGACGGCCCGACCGGCAGCGACGGCGCCGTCGTGGCGCTCGGCCCCGGCGGCGAACTGAAG
TGGTACCGCAAGTTCGGCCCGGCGGACCGGCTGGGCGAGCGGATGGCCTCCCTCAACACCGCACCGCTGGCCCTGATCAG
CCGGGGCGCACTCATCTTCGGCGACGTCAACGGCCACATCTACAGCTACGCCCTGGACACCGGCCAGCCGATGGGCGGCG
ACGGGCGGCCCGCGCTCATCCAGCCGGAAGGGCGGGCGCCCACGGACCGGCTGTTCCTGCTGAAGGACGACGAGCAGCCG
AACACCGGCCCCTACAACTTCTCCCAGGTCTCAGGCGTCGGCGTCGATCCCGCCTTCGCCTACGGCCTGCTGCTCGTCGG
CGTCAACTACACCGACGCTTCCGGGACCTCCGGCCGGCTGGTGGCCTACCGGGCCGGCGAGGCCTACGACCTGCGGTGGC
TGGATGAACCGGGGCCCCTGGAGCTGGAGCCGGGCAAGACAGTCGCCCTGCAGCCCCGGCTCCAGCTGGAGCTGACGGCC
CGGACCCTGGCCGCGCTCTGCCCGGGCCCGCTGTCCGTCGAGTGGTTCCTCACCGACGAGAACGGCAAGCTGGTGCGGTC
CCTGGGGACGGCGCCGCTGCCCGGCGATCTGGCGCCGCAGCAGCCCCACCCGGTGCCGCTGACCGTCGCCCTGACAGAGA
CCGACCCGGCGGAGGGGCAGATCGTGGGCATCATCGACTTGCCCTCCGTGTACGCCCTCAGCGCGCCGCACACGGCCAAC
CCGAAGGTGGCGGCGGCCCGGGGCCTCGCGGCGGCGCTGGGGCTTCCGGCCGAGAAGAGCTGCCTCGGTGCGGTGGCCGA
GGTGGTGGAGCGGGAGGGGGAGCCGGGGCCGGAGGGCGGCCTGGCCAACAACGTGCTGATCGTGCCGTACCGCAACCCGC
AGCCGCCCGATGAGCCTGAGCGTCCGGGCGAGGAGGGCGGAGGCGGGAAAGCGATCATCGACGACCCGTGGGTGGTGGAG
CTGGCGGTGCCGGAGGTGGCCGAGGCAGGCCGGCCGTTTGAGGTCGGGATCTACCTGGGTTACCAGAACAACCTGGGTCA
GGGCGAAATCCGGGTGCCGCTCCGGCTGTGGGCGCGGCCTGCGAGGGGCGCATCACCGCCCCCGGACGTGTGGCAGATGG
TGACGATCGACAAGGTGCCCTGCTTCAGCCTGAAGCCGGGGACGATCCCGGGGCTGAGCGTAGGCATGTGGGAGATCATC
GCCGAGATCGACTACCCGGCTGACACCCGGCCGGAGAACAACCGGGTCATCCGGAGGGTGGAGGTGCTGCACCTGAAGCC
GGGCGAGAGCGGCGGCGCGGAGGGCGGGGCCATCACGGACTGA

Upstream 100 bases:

>100_bases
GTACCAGGTTCACATCTTCACGCCGTTCTTCCCCCTGTACGAGTACCCCAGCTGGTACCTGGAGAATCGCGCGGTGAGGT
ACTAAGGGGGAGCTGGAATT

Downstream 100 bases:

>100_bases
CGGCCGTGCCATCGGCGACGGAGGCGATGCCACCACTGAGTGCGGTGCTGTCGGCGACCGTGGGCGATGCCACCACTGAG
TGCGGTGCTGCCGGCGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 840; Mature: 840

Protein sequence:

>840_residues
MNWRRWFAGVLACLLAMVPSPVVVAGDWITKGGSPQRTSTVLDPHGLIELSPYWETEALGESAAQPAVVDGVIYHLAGPY
LWRLELDDLQRPVGEAVAVSDPVKRKGVEFNVAPGGAFIAPQSSPSYSPETGILYFGTGYGWLWAYHTREGWFRPAELDL
GCPVVGSPVVIHDQGRDIVVVADRPNYPGEENRPEGRPLCPRGHGKVWVIRALDDLDRVPEVHHYEAATTKQDESGFGGF
ITPSAVMAPPHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVDSTAGFAGNFTSDGTHAYWLDTRGRLWGANLH
DGLEPAGWKGHMVDVPALIGARNAFTNTEPAVEVRQTPDGPETHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELK
WYRKFGPADRLGERMASLNTAPLALISRGALIFGDVNGHIYSYALDTGQPMGGDGRPALIQPEGRAPTDRLFLLKDDEQP
NTGPYNFSQVSGVGVDPAFAYGLLLVGVNYTDASGTSGRLVAYRAGEAYDLRWLDEPGPLELEPGKTVALQPRLQLELTA
RTLAALCPGPLSVEWFLTDENGKLVRSLGTAPLPGDLAPQQPHPVPLTVALTETDPAEGQIVGIIDLPSVYALSAPHTAN
PKVAAARGLAAALGLPAEKSCLGAVAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGGKAIIDDPWVVE
LAVPEVAEAGRPFEVGIYLGYQNNLGQGEIRVPLRLWARPARGASPPPDVWQMVTIDKVPCFSLKPGTIPGLSVGMWEII
AEIDYPADTRPENNRVIRRVEVLHLKPGESGGAEGGAITD

Sequences:

>Translated_840_residues
MNWRRWFAGVLACLLAMVPSPVVVAGDWITKGGSPQRTSTVLDPHGLIELSPYWETEALGESAAQPAVVDGVIYHLAGPY
LWRLELDDLQRPVGEAVAVSDPVKRKGVEFNVAPGGAFIAPQSSPSYSPETGILYFGTGYGWLWAYHTREGWFRPAELDL
GCPVVGSPVVIHDQGRDIVVVADRPNYPGEENRPEGRPLCPRGHGKVWVIRALDDLDRVPEVHHYEAATTKQDESGFGGF
ITPSAVMAPPHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVDSTAGFAGNFTSDGTHAYWLDTRGRLWGANLH
DGLEPAGWKGHMVDVPALIGARNAFTNTEPAVEVRQTPDGPETHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELK
WYRKFGPADRLGERMASLNTAPLALISRGALIFGDVNGHIYSYALDTGQPMGGDGRPALIQPEGRAPTDRLFLLKDDEQP
NTGPYNFSQVSGVGVDPAFAYGLLLVGVNYTDASGTSGRLVAYRAGEAYDLRWLDEPGPLELEPGKTVALQPRLQLELTA
RTLAALCPGPLSVEWFLTDENGKLVRSLGTAPLPGDLAPQQPHPVPLTVALTETDPAEGQIVGIIDLPSVYALSAPHTAN
PKVAAARGLAAALGLPAEKSCLGAVAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGGKAIIDDPWVVE
LAVPEVAEAGRPFEVGIYLGYQNNLGQGEIRVPLRLWARPARGASPPPDVWQMVTIDKVPCFSLKPGTIPGLSVGMWEII
AEIDYPADTRPENNRVIRRVEVLHLKPGESGGAEGGAITD
>Mature_840_residues
MNWRRWFAGVLACLLAMVPSPVVVAGDWITKGGSPQRTSTVLDPHGLIELSPYWETEALGESAAQPAVVDGVIYHLAGPY
LWRLELDDLQRPVGEAVAVSDPVKRKGVEFNVAPGGAFIAPQSSPSYSPETGILYFGTGYGWLWAYHTREGWFRPAELDL
GCPVVGSPVVIHDQGRDIVVVADRPNYPGEENRPEGRPLCPRGHGKVWVIRALDDLDRVPEVHHYEAATTKQDESGFGGF
ITPSAVMAPPHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVDSTAGFAGNFTSDGTHAYWLDTRGRLWGANLH
DGLEPAGWKGHMVDVPALIGARNAFTNTEPAVEVRQTPDGPETHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELK
WYRKFGPADRLGERMASLNTAPLALISRGALIFGDVNGHIYSYALDTGQPMGGDGRPALIQPEGRAPTDRLFLLKDDEQP
NTGPYNFSQVSGVGVDPAFAYGLLLVGVNYTDASGTSGRLVAYRAGEAYDLRWLDEPGPLELEPGKTVALQPRLQLELTA
RTLAALCPGPLSVEWFLTDENGKLVRSLGTAPLPGDLAPQQPHPVPLTVALTETDPAEGQIVGIIDLPSVYALSAPHTAN
PKVAAARGLAAALGLPAEKSCLGAVAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGGKAIIDDPWVVE
LAVPEVAEAGRPFEVGIYLGYQNNLGQGEIRVPLRLWARPARGASPPPDVWQMVTIDKVPCFSLKPGTIPGLSVGMWEII
AEIDYPADTRPENNRVIRRVEVLHLKPGESGGAEGGAITD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89946; Mature: 89946

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWRRWFAGVLACLLAMVPSPVVVAGDWITKGGSPQRTSTVLDPHGLIELSPYWETEALG
CCHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCEEECCCCEEEECCCCCHHHHC
ESAAQPAVVDGVIYHLAGPYLWRLELDDLQRPVGEAVAVSDPVKRKGVEFNVAPGGAFIA
HHCCCCHHHHHHHHCCCCCEEEEEEHHHHHCCCCCEEECCCCHHHCCCEEEECCCCEEEC
PQSSPSYSPETGILYFGTGYGWLWAYHTREGWFRPAELDLGCPVVGSPVVIHDQGRDIVV
CCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE
VADRPNYPGEENRPEGRPLCPRGHGKVWVIRALDDLDRVPEVHHYEAATTKQDESGFGGF
EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCEEECCCCCCCCCCCCCCE
ITPSAVMAPPHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVDSTAGFAGNFTS
ECCCEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCC
DGTHAYWLDTRGRLWGANLHDGLEPAGWKGHMVDVPALIGARNAFTNTEPAVEVRQTPDG
CCCEEEEEECCCCEECCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCCCCEEEEECCCC
PETHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELKWYRKFGPADRLGERMASLNT
CCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCC
APLALISRGALIFGDVNGHIYSYALDTGQPMGGDGRPALIQPEGRAPTDRLFLLKDDEQP
CCCHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCC
NTGPYNFSQVSGVGVDPAFAYGLLLVGVNYTDASGTSGRLVAYRAGEAYDLRWLDEPGPL
CCCCCCHHHCCCCCCCHHHHEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEECCCCCCE
ELEPGKTVALQPRLQLELTARTLAALCPGPLSVEWFLTDENGKLVRSLGTAPLPGDLAPQ
EECCCCEEEECCCEEEEEHHHHHHHHCCCCCEEEEEEECCCCCEEHHCCCCCCCCCCCCC
QPHPVPLTVALTETDPAEGQIVGIIDLPSVYALSAPHTANPKVAAARGLAAALGLPAEKS
CCCCEEEEEEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHH
CLGAVAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGGKAIIDDPWVVE
HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEEE
LAVPEVAEAGRPFEVGIYLGYQNNLGQGEIRVPLRLWARPARGASPPPDVWQMVTIDKVP
EECCHHHHCCCCEEEEEEEEECCCCCCCEEEEEHHEECCCCCCCCCCCCCEEEEEECCCC
CFSLKPGTIPGLSVGMWEIIAEIDYPADTRPENNRVIRRVEVLHLKPGESGGAEGGAITD
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNWRRWFAGVLACLLAMVPSPVVVAGDWITKGGSPQRTSTVLDPHGLIELSPYWETEALG
CCHHHHHHHHHHHHHHHCCCCEEEECCEEECCCCCCCCCEEECCCCEEEECCCCCHHHHC
ESAAQPAVVDGVIYHLAGPYLWRLELDDLQRPVGEAVAVSDPVKRKGVEFNVAPGGAFIA
HHCCCCHHHHHHHHCCCCCEEEEEEHHHHHCCCCCEEECCCCHHHCCCEEEECCCCEEEC
PQSSPSYSPETGILYFGTGYGWLWAYHTREGWFRPAELDLGCPVVGSPVVIHDQGRDIVV
CCCCCCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE
VADRPNYPGEENRPEGRPLCPRGHGKVWVIRALDDLDRVPEVHHYEAATTKQDESGFGGF
EECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHCCCCCEEECCCCCCCCCCCCCCE
ITPSAVMAPPHGSNPSFVIGTDGFEGGRALRLALDRDNDYRPYRVWTVDSTAGFAGNFTS
ECCCEEECCCCCCCCCEEEECCCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCC
DGTHAYWLDTRGRLWGANLHDGLEPAGWKGHMVDVPALIGARNAFTNTEPAVEVRQTPDG
CCCEEEEEECCCCEECCCCCCCCCCCCCCCCEEECHHHHCCCCCCCCCCCCEEEEECCCC
PETHLYVTLRNYTDTGAGLRDGPTGSDGAVVALGPGGELKWYRKFGPADRLGERMASLNT
CCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCC
APLALISRGALIFGDVNGHIYSYALDTGQPMGGDGRPALIQPEGRAPTDRLFLLKDDEQP
CCCHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCCCEEECCCCCCCCCEEEEEECCCCC
NTGPYNFSQVSGVGVDPAFAYGLLLVGVNYTDASGTSGRLVAYRAGEAYDLRWLDEPGPL
CCCCCCHHHCCCCCCCHHHHEEEEEEEEEECCCCCCCCEEEEEECCCEEEEEECCCCCCE
ELEPGKTVALQPRLQLELTARTLAALCPGPLSVEWFLTDENGKLVRSLGTAPLPGDLAPQ
EECCCCEEEECCCEEEEEHHHHHHHHCCCCCEEEEEEECCCCCEEHHCCCCCCCCCCCCC
QPHPVPLTVALTETDPAEGQIVGIIDLPSVYALSAPHTANPKVAAARGLAAALGLPAEKS
CCCCEEEEEEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHH
CLGAVAEVVEREGEPGPEGGLANNVLIVPYRNPQPPDEPERPGEEGGGGKAIIDDPWVVE
HHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCEEEE
LAVPEVAEAGRPFEVGIYLGYQNNLGQGEIRVPLRLWARPARGASPPPDVWQMVTIDKVP
EECCHHHHCCCCEEEEEEEEECCCCCCCEEEEEHHEECCCCCCCCCCCCCEEEEEECCCC
CFSLKPGTIPGLSVGMWEIIAEIDYPADTRPENNRVIRRVEVLHLKPGESGGAEGGAITD
CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA