| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is yhiH [C]
Identifier: 51893392
GI number: 51893392
Start: 2421349
End: 2421888
Strand: Reverse
Name: yhiH [C]
Synonym: STH2254
Alternate gene names: 51893392
Gene position: 2421888-2421349 (Counterclockwise)
Preceding gene: 51893393
Following gene: 51893391
Centisome position: 67.91
GC content: 71.85
Gene sequence:
>540_bases GTGTTCCAGCGCATCCTGGCCCTGGCCCAGAAGGAGTTCATCCAGATCCGGCGCGACCGGCGGAACCTGGCGATGATGCT GGTCCTGCCGATCCTCTGGCTCATCCTCTTCGGCTATGCGTTCACCTTCGACGTGGGCGAAGTCCCCGTGGCCGTCGTCG ACCGGAGCGGCACGACCATCGGCGCCGCCGTGGCCGACGCGCTCCGCAGCTACGACCGCTTCGTCCCCGCCGACCTGCCG GAACCGTCTGAGGCCGGCATCCGGGAGGCGATCTTCCGGGGCGAGGTGGTGATGGGCGTCCTCATCCCGCCCGGCTACGG CGACGAGGCGCATGCCGAGCTGCACATCCTGCTGGACGGGGCGAACCTCTTCGCCGCCCAGACCGCGGCCCGCCTGATCC CGGCCGCGCTGGAGCCCGCCCAGGAGGTTGTGCGGGCGGAGCTTCAGGCCCGCACCCGGGCGCATGTGGCGGAGCTGATC GCCGAGGCGGCCGAGGCGCGCAAGGCTGAGGTGCTCGAGGGAGCGGCGAGTCCGCCGTGA
Upstream 100 bases:
>100_bases CCGCGCTGGAGGGGCTCACCAACGACGCCGTGGTCGACGCGGTCCTGGAGACCACGCTGGCCGGCCTTCGGACCGACGGC TGAGAGAGGAGGAACACGCC
Downstream 100 bases:
>100_bases CGCCCCTGCCGTTCCCCCGGGCAAACCTCTGCCCGGGGGTTTTCGTATTGGTTATGGGAGAACGAACAACATGGGGGAGT GGGAACCGATGAAGGGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Abc-2 Type Transporter; ABC Transporter Permease; ABC Transporter Permease Protein
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MFQRILALAQKEFIQIRRDRRNLAMMLVLPILWLILFGYAFTFDVGEVPVAVVDRSGTTIGAAVADALRSYDRFVPADLP EPSEAGIREAIFRGEVVMGVLIPPGYGDEAHAELHILLDGANLFAAQTAARLIPAALEPAQEVVRAELQARTRAHVAELI AEAAEARKAEVLEGAASPP
Sequences:
>Translated_179_residues MFQRILALAQKEFIQIRRDRRNLAMMLVLPILWLILFGYAFTFDVGEVPVAVVDRSGTTIGAAVADALRSYDRFVPADLP EPSEAGIREAIFRGEVVMGVLIPPGYGDEAHAELHILLDGANLFAAQTAARLIPAALEPAQEVVRAELQARTRAHVAELI AEAAEARKAEVLEGAASPP >Mature_179_residues MFQRILALAQKEFIQIRRDRRNLAMMLVLPILWLILFGYAFTFDVGEVPVAVVDRSGTTIGAAVADALRSYDRFVPADLP EPSEAGIREAIFRGEVVMGVLIPPGYGDEAHAELHILLDGANLFAAQTAARLIPAALEPAQEVVRAELQARTRAHVAELI AEAAEARKAEVLEGAASPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19394; Mature: 19394
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQRILALAQKEFIQIRRDRRNLAMMLVLPILWLILFGYAFTFDVGEVPVAVVDRSGTTI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCH GAAVADALRSYDRFVPADLPEPSEAGIREAIFRGEVVMGVLIPPGYGDEAHAELHILLDG HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEC ANLFAAQTAARLIPAALEPAQEVVRAELQARTRAHVAELIAEAAEARKAEVLEGAASPP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFQRILALAQKEFIQIRRDRRNLAMMLVLPILWLILFGYAFTFDVGEVPVAVVDRSGTTI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCH GAAVADALRSYDRFVPADLPEPSEAGIREAIFRGEVVMGVLIPPGYGDEAHAELHILLDG HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEC ANLFAAQTAARLIPAALEPAQEVVRAELQARTRAHVAELIAEAAEARKAEVLEGAASPP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA