Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893389

Identifier: 51893389

GI number: 51893389

Start: 2416064

End: 2417284

Strand: Reverse

Name: 51893389

Synonym: STH2251

Alternate gene names: NA

Gene position: 2417284-2416064 (Counterclockwise)

Preceding gene: 51893390

Following gene: 51893388

Centisome position: 67.78

GC content: 68.39

Gene sequence:

>1221_bases
ATGCACACAGACCCGCCCGACCCGCGCCGGGGGCAGGTTTGCTCGCTGGAGGTGGCCCGAACGGACCACCTCGTCCGGCG
GTTGCGGTCGAAGCTGATGGATTATCTCCGCGACGACGAGGCGGAGATCTCCGTCGGCTGGGGGATGGTACGCTTCTTTC
CCCCGGAGCTGTTTGACGAGGTGGAACCTGAGGCACGGAGCCTGGCGGTGGACTGGCTGGCCTTCATGTTCCCGGGGGAA
TGGAGGGTTCCCCTGGCCCGGCAGTTGGCGGAGGATGATGCGTCGTTGTCGCAGGAGGAGCGTGCGACTCTGAACGCCTG
GGCCGACAGGGCGGCACCGGGCTTCTTCCGCGTGGAGTCGGTCTCCGGCCCGCAGGCCAGACTGGTCCGCCTCCCCGATG
ATGCGCCCCGCACCGTGAGAGGGGTGCGGGGCGGGGTGCTGAAGCCGGGAGACCTGCTCGTGACCTGGCTGCTGCCCACG
GGACCGGCTTACTACCTCGGCCTCGAAACGGCGTTCGTGGACCAGGACCTGACAGACGGTCTGCGCCACATCCTTCAGGT
GGAGATGGACCTGCTCCGGCGGCAGCGGCCCCGTGCCACCTGGGATGACCTCTACCGCACCTCCTGGCCGCGGATCGTGT
GGGCTGTCGGTGTGCTGGCCAACGATGCGGATGTGTTCCGCATCCACGCGCCGCCGGGTCCGTCCGTGCTGTGGGATGGC
CGGCCGGTGCCGGACGCCCCGGCATGGTGGGAGCGGACCGCCGAATGGGCGCGCACGTTGGCTGAAACGAGTGCGCCTAT
CCACGAAGAGCCGGGCGACGGGATCGAGCGGCTCTGGTGGGATGCCGCGCTGACCCTTAGGCCGAAGCAGGAGCGCACGG
CGGCATCCTGGACGGCGGCGGTCGTCTATGCATTCCGGCGCTACGTGCAGGGCGACCCCACCGTGACGCAGGCCGAAGTG
GCGGAGCAGTGCTGCGTTTCGCCAGCTACGGTGGGGAATCGCAGCCGGCAGATCGTAAAGGCGCTCGGGCTGGAGCCGTT
CGACCTCCGCTACGTGGACCTGCTGGCACGGGACGTGCGAATCCTCTGGGAGATGCACTGCATCGGCGCGCTCGGCTCCC
CCGCACTCTATGGCGGAATGGATGTGGCGAAGATGTCGCCCGAGGACAAGCTGCTCCTTCACGCGGTCCTGCGCGATATG
CGCCGGTATCTGAACGAGTGA

Upstream 100 bases:

>100_bases
CACCGGCGGAGGAGCTGGCATCAGACCGACGCTGAAGGTATCTCCAGTCTCAGTGTTAAAGACTTAACAGGACACACATC
TGACCAGGGAGTTGAGGTCG

Downstream 100 bases:

>100_bases
CGGGCAGGATTCCACGGGAATCCCGCCCGTCCGCGTCGTCAACGCAGCAGTTCCCGCAGCTCCACCGGCACCACGGCAAC
CTCATGGTTCCGACCGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MHTDPPDPRRGQVCSLEVARTDHLVRRLRSKLMDYLRDDEAEISVGWGMVRFFPPELFDEVEPEARSLAVDWLAFMFPGE
WRVPLARQLAEDDASLSQEERATLNAWADRAAPGFFRVESVSGPQARLVRLPDDAPRTVRGVRGGVLKPGDLLVTWLLPT
GPAYYLGLETAFVDQDLTDGLRHILQVEMDLLRRQRPRATWDDLYRTSWPRIVWAVGVLANDADVFRIHAPPGPSVLWDG
RPVPDAPAWWERTAEWARTLAETSAPIHEEPGDGIERLWWDAALTLRPKQERTAASWTAAVVYAFRRYVQGDPTVTQAEV
AEQCCVSPATVGNRSRQIVKALGLEPFDLRYVDLLARDVRILWEMHCIGALGSPALYGGMDVAKMSPEDKLLLHAVLRDM
RRYLNE

Sequences:

>Translated_406_residues
MHTDPPDPRRGQVCSLEVARTDHLVRRLRSKLMDYLRDDEAEISVGWGMVRFFPPELFDEVEPEARSLAVDWLAFMFPGE
WRVPLARQLAEDDASLSQEERATLNAWADRAAPGFFRVESVSGPQARLVRLPDDAPRTVRGVRGGVLKPGDLLVTWLLPT
GPAYYLGLETAFVDQDLTDGLRHILQVEMDLLRRQRPRATWDDLYRTSWPRIVWAVGVLANDADVFRIHAPPGPSVLWDG
RPVPDAPAWWERTAEWARTLAETSAPIHEEPGDGIERLWWDAALTLRPKQERTAASWTAAVVYAFRRYVQGDPTVTQAEV
AEQCCVSPATVGNRSRQIVKALGLEPFDLRYVDLLARDVRILWEMHCIGALGSPALYGGMDVAKMSPEDKLLLHAVLRDM
RRYLNE
>Mature_406_residues
MHTDPPDPRRGQVCSLEVARTDHLVRRLRSKLMDYLRDDEAEISVGWGMVRFFPPELFDEVEPEARSLAVDWLAFMFPGE
WRVPLARQLAEDDASLSQEERATLNAWADRAAPGFFRVESVSGPQARLVRLPDDAPRTVRGVRGGVLKPGDLLVTWLLPT
GPAYYLGLETAFVDQDLTDGLRHILQVEMDLLRRQRPRATWDDLYRTSWPRIVWAVGVLANDADVFRIHAPPGPSVLWDG
RPVPDAPAWWERTAEWARTLAETSAPIHEEPGDGIERLWWDAALTLRPKQERTAASWTAAVVYAFRRYVQGDPTVTQAEV
AEQCCVSPATVGNRSRQIVKALGLEPFDLRYVDLLARDVRILWEMHCIGALGSPALYGGMDVAKMSPEDKLLLHAVLRDM
RRYLNE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45974; Mature: 45974

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTDPPDPRRGQVCSLEVARTDHLVRRLRSKLMDYLRDDEAEISVGWGMVRFFPPELFDE
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCHHHHHH
VEPEARSLAVDWLAFMFPGEWRVPLARQLAEDDASLSQEERATLNAWADRAAPGFFRVES
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEC
VSGPQARLVRLPDDAPRTVRGVRGGVLKPGDLLVTWLLPTGPAYYLGLETAFVDQDLTDG
CCCCCCEEEECCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECHHHHHCCHHHHH
LRHILQVEMDLLRRQRPRATWDDLYRTSWPRIVWAVGVLANDADVFRIHAPPGPSVLWDG
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEECC
RPVPDAPAWWERTAEWARTLAETSAPIHEEPGDGIERLWWDAALTLRPKQERTAASWTAA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHH
VVYAFRRYVQGDPTVTQAEVAEQCCVSPATVGNRSRQIVKALGLEPFDLRYVDLLARDVR
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
ILWEMHCIGALGSPALYGGMDVAKMSPEDKLLLHAVLRDMRRYLNE
HHHHHHHHHCCCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHTDPPDPRRGQVCSLEVARTDHLVRRLRSKLMDYLRDDEAEISVGWGMVRFFPPELFDE
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHCCHHHHHH
VEPEARSLAVDWLAFMFPGEWRVPLARQLAEDDASLSQEERATLNAWADRAAPGFFRVES
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEC
VSGPQARLVRLPDDAPRTVRGVRGGVLKPGDLLVTWLLPTGPAYYLGLETAFVDQDLTDG
CCCCCCEEEECCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCEEEEECHHHHHCCHHHHH
LRHILQVEMDLLRRQRPRATWDDLYRTSWPRIVWAVGVLANDADVFRIHAPPGPSVLWDG
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEECC
RPVPDAPAWWERTAEWARTLAETSAPIHEEPGDGIERLWWDAALTLRPKQERTAASWTAA
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCCHHHHHHHHHHH
VVYAFRRYVQGDPTVTQAEVAEQCCVSPATVGNRSRQIVKALGLEPFDLRYVDLLARDVR
HHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
ILWEMHCIGALGSPALYGGMDVAKMSPEDKLLLHAVLRDMRRYLNE
HHHHHHHHHCCCCCHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA