Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893338

Identifier: 51893338

GI number: 51893338

Start: 2361580

End: 2362257

Strand: Reverse

Name: 51893338

Synonym: STH2200

Alternate gene names: NA

Gene position: 2362257-2361580 (Counterclockwise)

Preceding gene: 51893339

Following gene: 51893337

Centisome position: 66.24

GC content: 68.44

Gene sequence:

>678_bases
ATGCCAGGCGGTGGCGGCGGCGGTTTCCTGCAGTACATGGACAGCATGGCGATGGCCTTCGGTTTCCTGCTGTTCCTCTG
GATTCTGCACCATGCCTGCGGCCGCTGCGTGAAGCTGCACCACGGTGCCTTTCTGAGCGGCTCGATGGTCTCCCTGATCG
TGGTCTTTCTGGTGGGCCGCAAGGCGGAGCTGGCCCTGGACCCGTTCGTCGGCGCGATGGCCCTGCTGGCCGGCCTGCTC
TACGCTACCGGTTTCCTGGCGCTGATCGACGGGCGGCGGCGGCTCACGCCCTACTTCGTCGCCTACGGCATGGTGGGCAT
CCTGGGCTACGCCCTCGCCGCCCACTACGGGAACGTCACCGGCGCGGTGTGGCAGATGCCGCTGCTGTGGATGACGGCCA
TCCCCAGCGGCGCCGTCCTGCTGGGAGGTCCGGTCTGGCTCATGTCCCGCAAGGGGGACGGCTCCCACGCCCTGTGGGTG
CCGCTGGGCACGATCCTGCTCTACGCGGCCTTCTACTACATGGTCGGGACTACCAACGGGACGATCGCCCTCGGCGACAA
CGCCAGCTCGCTGATCAACACCCTACTGGCCGCCGGGTACCTGTGCCACCTGCTGGGGTTTGTCCTGGTGCGCCGGTGGC
TGGCAGCGGACCGTCCCGATGCGGCGGAGCCGGCCTAG

Upstream 100 bases:

>100_bases
CGCGGCTCGGCCGTCCGCCGGGCGAGTGGCTGGCGGACGGGGTGCGCTGGCGCATCGCTGCCCGGCCGCCTGAAACGGCG
GCGAAAGGGGGGCGCAGCTG

Downstream 100 bases:

>100_bases
CGTGGATGGGCACACAAGGGAGTGGCCCAGTCGGCCGTTCTGACCGACTGGGCCATTCTTCTGCAGTTACTTGGATTTTC
GCGTCCGGCGCGCCCGCGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MPGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGRKAELALDPFVGAMALLAGLL
YATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVTGAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWV
PLGTILLYAAFYYMVGTTNGTIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA

Sequences:

>Translated_225_residues
MPGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGRKAELALDPFVGAMALLAGLL
YATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVTGAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWV
PLGTILLYAAFYYMVGTTNGTIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA
>Mature_224_residues
PGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGRKAELALDPFVGAMALLAGLLY
ATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVTGAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWVP
LGTILLYAAFYYMVGTTNGTIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23926; Mature: 23795

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
KAELALDPFVGAMALLAGLLYATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
GAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWVPLGTILLYAAFYYMVGTTNG
HHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
TIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PGGGGGGFLQYMDSMAMAFGFLLFLWILHHACGRCVKLHHGAFLSGSMVSLIVVFLVGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
KAELALDPFVGAMALLAGLLYATGFLALIDGRRRLTPYFVAYGMVGILGYALAAHYGNVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH
GAVWQMPLLWMTAIPSGAVLLGGPVWLMSRKGDGSHALWVPLGTILLYAAFYYMVGTTNG
HHHHHHHHHHHHHCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
TIALGDNASSLINTLLAAGYLCHLLGFVLVRRWLAADRPDAAEPA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA