Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893283

Identifier: 51893283

GI number: 51893283

Start: 2290941

End: 2292155

Strand: Reverse

Name: 51893283

Synonym: STH2145

Alternate gene names: NA

Gene position: 2292155-2290941 (Counterclockwise)

Preceding gene: 51893284

Following gene: 51893282

Centisome position: 64.28

GC content: 65.68

Gene sequence:

>1215_bases
GTGCGTAACAGGGGAGGCGGACCGTGCATCCTCCGCGATGCGGCGCTCATCTGTCCTTCCAACCCGGAGGTGTACACTTT
GTACCGGGTCCCGACGACCGACATCCGCGCCGGCATGAGACTGGGGAAGACGATCTTTTCTGCGAATGGCCAGGTGTTGC
TGCAAGCGGGAACGGTGCTGAGGGAGTCCTTCATCGGGCCCTTGCTTTCGTACGGCATCACCACCGTGTACATCGTCAAC
GAGCTGGCGCCTGACGTCGAGCCGCTGGACGTCGTATCCGATGAGACCCGGATCCAGTTGAAGGACCAGATGCAGAGGAC
GATGGAGGAGGTGCGGGCGGCCCTCGCCGAGGCGACCCACGCCGGCCTTCGCCACTTCTCGCCCACCATCCGCACCGACG
GCCTGAAGCAGACGATCGACCAGATCATCGCGGAACTGCTCAGCAACCCCAAGGTGGCCGTCAGCCTGGTGGACATCCGG
TCTGCCGACCAGTACACGCTCAGCCACTCCGTCAATGTCTGCATCCTGTCCACCCTGCTCGGCATCGAGCTGGGGTTTTC
ACTGGACGACCTGCGGGATCTCGCCCTGGGAACGCTCCTGCACGACATCGGCAAGGTGGCGATCCCGCCGGAGATCCTCA
ACAAACCCGACCGGCTCACGCCCGAAGAGGCGGAGATCATGAAGCGGCACACGGTGCTGGGCTGGGAGCTCCTGAAGAAC
CAGCCCGAGATCCCGCCCACCGCGGCCGTGGTCGCGCTTCAGCACCACGAGCGCTGGGCCGGGGGCGGGTACCCGCACAA
CCTGCGCGACAACCAGATCTACCGGTATGCCCGGGTGTGCGCCATCGTCGACTGCTACGACGCGATGACGTCGGACCGCA
TCTACCGGAAGGGGCTCAGCCCCGCCATGGCGCTGGAATCGCTGTCGGGCCCCATGCACGGATTCTTCGATCCCCACTTC
CTGCTCGCGTTCCTCAACTGCATCGCGCCCTGGCCGGTGGGCTCGATGGTGGAGCTGACCGGCGGGCGGAAGGCCGTGGT
GGTGGCCGCTGAGCGCGGACGGGCCGACCGGCCCCGGGTACGGGTGCTGCTGGAGCCCGACGGGTCCCCCACGCCGCAGC
CCTATGAGATCGATCTGTTCCGGGAGCGGCACGTGGAGATCATCCGCGAAGTCCACGAAGACGCTGATCAGTACATGAGG
GAGATGGCTGTTTAG

Upstream 100 bases:

>100_bases
ATATCAAAAAACGGAAAACCAATCGATGAAGGTCCGGGTTGGAGAAGGATTAGGTCGCTATTGTGTATAACCCATACATT
AATGTTTGTACCTTTGGTGT

Downstream 100 bases:

>100_bases
CCGCCCGCCCCGGGGAGGAACGCACTGTGGCGAAGGTCCGACGGGTACCGGTAGCCGAGCTGCAGCCCGGTGATCTTCTG
GCGAGGGACGTGCTGAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MRNRGGGPCILRDAALICPSNPEVYTLYRVPTTDIRAGMRLGKTIFSANGQVLLQAGTVLRESFIGPLLSYGITTVYIVN
ELAPDVEPLDVVSDETRIQLKDQMQRTMEEVRAALAEATHAGLRHFSPTIRTDGLKQTIDQIIAELLSNPKVAVSLVDIR
SADQYTLSHSVNVCILSTLLGIELGFSLDDLRDLALGTLLHDIGKVAIPPEILNKPDRLTPEEAEIMKRHTVLGWELLKN
QPEIPPTAAVVALQHHERWAGGGYPHNLRDNQIYRYARVCAIVDCYDAMTSDRIYRKGLSPAMALESLSGPMHGFFDPHF
LLAFLNCIAPWPVGSMVELTGGRKAVVVAAERGRADRPRVRVLLEPDGSPTPQPYEIDLFRERHVEIIREVHEDADQYMR
EMAV

Sequences:

>Translated_404_residues
MRNRGGGPCILRDAALICPSNPEVYTLYRVPTTDIRAGMRLGKTIFSANGQVLLQAGTVLRESFIGPLLSYGITTVYIVN
ELAPDVEPLDVVSDETRIQLKDQMQRTMEEVRAALAEATHAGLRHFSPTIRTDGLKQTIDQIIAELLSNPKVAVSLVDIR
SADQYTLSHSVNVCILSTLLGIELGFSLDDLRDLALGTLLHDIGKVAIPPEILNKPDRLTPEEAEIMKRHTVLGWELLKN
QPEIPPTAAVVALQHHERWAGGGYPHNLRDNQIYRYARVCAIVDCYDAMTSDRIYRKGLSPAMALESLSGPMHGFFDPHF
LLAFLNCIAPWPVGSMVELTGGRKAVVVAAERGRADRPRVRVLLEPDGSPTPQPYEIDLFRERHVEIIREVHEDADQYMR
EMAV
>Mature_404_residues
MRNRGGGPCILRDAALICPSNPEVYTLYRVPTTDIRAGMRLGKTIFSANGQVLLQAGTVLRESFIGPLLSYGITTVYIVN
ELAPDVEPLDVVSDETRIQLKDQMQRTMEEVRAALAEATHAGLRHFSPTIRTDGLKQTIDQIIAELLSNPKVAVSLVDIR
SADQYTLSHSVNVCILSTLLGIELGFSLDDLRDLALGTLLHDIGKVAIPPEILNKPDRLTPEEAEIMKRHTVLGWELLKN
QPEIPPTAAVVALQHHERWAGGGYPHNLRDNQIYRYARVCAIVDCYDAMTSDRIYRKGLSPAMALESLSGPMHGFFDPHF
LLAFLNCIAPWPVGSMVELTGGRKAVVVAAERGRADRPRVRVLLEPDGSPTPQPYEIDLFRERHVEIIREVHEDADQYMR
EMAV

Specific function: Unknown

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44923; Mature: 44923

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRGGGPCILRDAALICPSNPEVYTLYRVPTTDIRAGMRLGKTIFSANGQVLLQAGTVL
CCCCCCCCEEEECCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHHHH
RESFIGPLLSYGITTVYIVNELAPDVEPLDVVSDETRIQLKDQMQRTMEEVRAALAEATH
HHHHHHHHHHHCHHHEEEEHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGLRHFSPTIRTDGLKQTIDQIIAELLSNPKVAVSLVDIRSADQYTLSHSVNVCILSTLL
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHCCCHHHHHHHHH
GIELGFSLDDLRDLALGTLLHDIGKVAIPPEILNKPDRLTPEEAEIMKRHTVLGWELLKN
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
QPEIPPTAAVVALQHHERWAGGGYPHNLRDNQIYRYARVCAIVDCYDAMTSDRIYRKGLS
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAMALESLSGPMHGFFDPHFLLAFLNCIAPWPVGSMVELTGGRKAVVVAAERGRADRPRV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCE
RVLLEPDGSPTPQPYEIDLFRERHVEIIREVHEDADQYMREMAV
EEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNRGGGPCILRDAALICPSNPEVYTLYRVPTTDIRAGMRLGKTIFSANGQVLLQAGTVL
CCCCCCCCEEEECCEEEECCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEHHHHH
RESFIGPLLSYGITTVYIVNELAPDVEPLDVVSDETRIQLKDQMQRTMEEVRAALAEATH
HHHHHHHHHHHCHHHEEEEHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGLRHFSPTIRTDGLKQTIDQIIAELLSNPKVAVSLVDIRSADQYTLSHSVNVCILSTLL
HHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCEEHHCCCHHHHHHHHH
GIELGFSLDDLRDLALGTLLHDIGKVAIPPEILNKPDRLTPEEAEIMKRHTVLGWELLKN
HHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
QPEIPPTAAVVALQHHERWAGGGYPHNLRDNQIYRYARVCAIVDCYDAMTSDRIYRKGLS
CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAMALESLSGPMHGFFDPHFLLAFLNCIAPWPVGSMVELTGGRKAVVVAAERGRADRPRV
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCEEEEEEECCCCCCCCCE
RVLLEPDGSPTPQPYEIDLFRERHVEIIREVHEDADQYMREMAV
EEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]