Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51893284

Identifier: 51893284

GI number: 51893284

Start: 2292294

End: 2292593

Strand: Reverse

Name: 51893284

Synonym: STH2146

Alternate gene names: NA

Gene position: 2292593-2292294 (Counterclockwise)

Preceding gene: 51893285

Following gene: 51893283

Centisome position: 64.29

GC content: 72.0

Gene sequence:

>300_bases
GTGGACTTGCGGGTGGGCGGCCGTTACCGGCTGTCGATGCGGTTGGGCTGGGGCGACCTGGTGTGCGTGGGGACGTACCG
GGAGATCGTCCCGCCGGAGCGACTCGTCTTCACCTTCGCCTGGGAGGGCGACCCCGCCGGGGAGGAGACGGTGGTCTCGC
TGTTCCTGCGGGAGGTCGACGGCGGGACCGAGCTGATCCTGCGACACGAGGGGTTTGCGGCCCCCGGGGTGGCGGAAAAC
CACCGGGACGGCTGGATGGACTGCGTCGGGCGGCTGGCGGCGCTTGCGCCGGCCCTTTGA

Upstream 100 bases:

>100_bases
CCGGGCGGAGGTGGACTTGCTGGTGCGCTGGTAGGGGCCGGAGGCCCGGGCGGAGGTGGACTTGCTGGTGCGCTGGTAGG
GGCCGGAGGCCCGGGCGGAG

Downstream 100 bases:

>100_bases
GAGAGGGCGGCGGGAACTTACAGTTATAGGGAGTCAACATATCAAAAAACGGAAAACCAATCGATGAAGGTCCGGGTTGG
AGAAGGATTAGGTCGCTATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MDLRVGGRYRLSMRLGWGDLVCVGTYREIVPPERLVFTFAWEGDPAGEETVVSLFLREVDGGTELILRHEGFAAPGVAEN
HRDGWMDCVGRLAALAPAL

Sequences:

>Translated_99_residues
MDLRVGGRYRLSMRLGWGDLVCVGTYREIVPPERLVFTFAWEGDPAGEETVVSLFLREVDGGTELILRHEGFAAPGVAEN
HRDGWMDCVGRLAALAPAL
>Mature_99_residues
MDLRVGGRYRLSMRLGWGDLVCVGTYREIVPPERLVFTFAWEGDPAGEETVVSLFLREVDGGTELILRHEGFAAPGVAEN
HRDGWMDCVGRLAALAPAL

Specific function: Unknown

COG id: COG3832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10916; Mature: 10916

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLRVGGRYRLSMRLGWGDLVCVGTYREIVPPERLVFTFAWEGDPAGEETVVSLFLREVD
CCCCCCCEEEEEEEECCCCEEEEECCHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC
GGTELILRHEGFAAPGVAENHRDGWMDCVGRLAALAPAL
CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDLRVGGRYRLSMRLGWGDLVCVGTYREIVPPERLVFTFAWEGDPAGEETVVSLFLREVD
CCCCCCCEEEEEEEECCCCEEEEECCHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC
GGTELILRHEGFAAPGVAENHRDGWMDCVGRLAALAPAL
CCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA