| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893282
Identifier: 51893282
GI number: 51893282
Start: 2289979
End: 2290914
Strand: Reverse
Name: 51893282
Synonym: STH2144
Alternate gene names: NA
Gene position: 2290914-2289979 (Counterclockwise)
Preceding gene: 51893283
Following gene: 51893280
Centisome position: 64.24
GC content: 69.12
Gene sequence:
>936_bases GTGGCGAAGGTCCGACGGGTACCGGTAGCCGAGCTGCAGCCCGGTGATCTTCTGGCGAGGGACGTGCTGAGCGAGGACGG CCGAGTCCTGCTTTCGACCGGAGTGCGACTCAACCGCAACTACATCTGGCAGCTCAGGCAGCACGGCGTCGAGGCGGTTT ACGTGCCGGACACGTCGCCGCCCAAGCCGGCGCCGGAGCTTTCTCTGCGTCTCCGGCGCGAGGTGACCCAGGAGCTCAGG CAGTTCACGGACGGCCTGCGACGGACGATGGAGCAGGCCACCGCCACCGTGCGTCTGCCGGAGCTGGAGCTGGACACCAG CGGTATCCGCCGGGCGGTGGTGGGCGTCGTGCGCGAGGTCCTCACCCACCCGGCCGCGGCGCTGCCCCTGCAGGAGCTCA GGCAGGCCGATGAGTACACATTGCTGCATTCGGTGGAAGTGTGTCTCCTCTCCACCATGATCGGCCGGGCGATGGGGCTG CAGGGCAGCGCCCTGGTCGACCTGGCGATGGGCGCGCTGCTCCACGACCTGGGCAAGGTCGGCATTCCGACGGCGATCCT CAACAAGCCCGACAGGCTGACGCCCGAGGAGCTCGAGGTCATGAAGCGGCACACGACCCTGGGCTGGGTGTTGCTCAGGG AGCAGCCGGACCTGCCGCCCGAGGTGGCGCTGGTGGCGCTTCAGCACCACGAGCGCTGGGACGGCAGGGGATACCCGATG GGGCTGGCCGGCGAACAGATCCATCTCTACGCCCGCATCTGCACGGTAGCCGACGTGTACGACGCCCTCACCGCCGACCG CGTCTACCGGGAGGGGATCCACCCCACGGAGGCGCTGGCCACGATGGCGGGGCCGATGCGGGAGATGTTCGACCCCAAGG TCCTGCAGACGTTCATGAACGCCGTCGAGCACGTGCAGCGGCAGGGGACCGCCTGA
Upstream 100 bases:
>100_bases GGGAGCGGCACGTGGAGATCATCCGCGAAGTCCACGAAGACGCTGATCAGTACATGAGGGAGATGGCTGTTTAGCCGCCC GCCCCGGGGAGGAACGCACT
Downstream 100 bases:
>100_bases GGAACCCGTTGGCCGGACAGACGAAAAGGCCGCCACCCGATCCCGGATGGCGGCCTCGATCGCGTCATGAGGCGGCGGAG GAGTCCAGACAGCCCTTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MAKVRRVPVAELQPGDLLARDVLSEDGRVLLSTGVRLNRNYIWQLRQHGVEAVYVPDTSPPKPAPELSLRLRREVTQELR QFTDGLRRTMEQATATVRLPELELDTSGIRRAVVGVVREVLTHPAAALPLQELRQADEYTLLHSVEVCLLSTMIGRAMGL QGSALVDLAMGALLHDLGKVGIPTAILNKPDRLTPEELEVMKRHTTLGWVLLREQPDLPPEVALVALQHHERWDGRGYPM GLAGEQIHLYARICTVADVYDALTADRVYREGIHPTEALATMAGPMREMFDPKVLQTFMNAVEHVQRQGTA
Sequences:
>Translated_311_residues MAKVRRVPVAELQPGDLLARDVLSEDGRVLLSTGVRLNRNYIWQLRQHGVEAVYVPDTSPPKPAPELSLRLRREVTQELR QFTDGLRRTMEQATATVRLPELELDTSGIRRAVVGVVREVLTHPAAALPLQELRQADEYTLLHSVEVCLLSTMIGRAMGL QGSALVDLAMGALLHDLGKVGIPTAILNKPDRLTPEELEVMKRHTTLGWVLLREQPDLPPEVALVALQHHERWDGRGYPM GLAGEQIHLYARICTVADVYDALTADRVYREGIHPTEALATMAGPMREMFDPKVLQTFMNAVEHVQRQGTA >Mature_310_residues AKVRRVPVAELQPGDLLARDVLSEDGRVLLSTGVRLNRNYIWQLRQHGVEAVYVPDTSPPKPAPELSLRLRREVTQELRQ FTDGLRRTMEQATATVRLPELELDTSGIRRAVVGVVREVLTHPAAALPLQELRQADEYTLLHSVEVCLLSTMIGRAMGLQ GSALVDLAMGALLHDLGKVGIPTAILNKPDRLTPEELEVMKRHTTLGWVLLREQPDLPPEVALVALQHHERWDGRGYPMG LAGEQIHLYARICTVADVYDALTADRVYREGIHPTEALATMAGPMREMFDPKVLQTFMNAVEHVQRQGTA
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34679; Mature: 34547
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVRRVPVAELQPGDLLARDVLSEDGRVLLSTGVRLNRNYIWQLRQHGVEAVYVPDTSP CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCEECHHHHHHHHHCCCCEEECCCCCC PKPAPELSLRLRREVTQELRQFTDGLRRTMEQATATVRLPELELDTSGIRRAVVGVVREV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH LTHPAAALPLQELRQADEYTLLHSVEVCLLSTMIGRAMGLQGSALVDLAMGALLHDLGKV HHCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GIPTAILNKPDRLTPEELEVMKRHTTLGWVLLREQPDLPPEVALVALQHHERWDGRGYPM CCCHHHHCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC GLAGEQIHLYARICTVADVYDALTADRVYREGIHPTEALATMAGPMREMFDPKVLQTFMN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH AVEHVQRQGTA HHHHHHHCCCC >Mature Secondary Structure AKVRRVPVAELQPGDLLARDVLSEDGRVLLSTGVRLNRNYIWQLRQHGVEAVYVPDTSP CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEECCCEECHHHHHHHHHCCCCEEECCCCCC PKPAPELSLRLRREVTQELRQFTDGLRRTMEQATATVRLPELELDTSGIRRAVVGVVREV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHH LTHPAAALPLQELRQADEYTLLHSVEVCLLSTMIGRAMGLQGSALVDLAMGALLHDLGKV HHCCHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GIPTAILNKPDRLTPEELEVMKRHTTLGWVLLREQPDLPPEVALVALQHHERWDGRGYPM CCCHHHHCCCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCC GLAGEQIHLYARICTVADVYDALTADRVYREGIHPTEALATMAGPMREMFDPKVLQTFMN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH AVEHVQRQGTA HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]