Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893260

Identifier: 51893260

GI number: 51893260

Start: 2265330

End: 2267780

Strand: Reverse

Name: 51893260

Synonym: STH2122

Alternate gene names: NA

Gene position: 2267780-2265330 (Counterclockwise)

Preceding gene: 51893263

Following gene: 51893259

Centisome position: 63.59

GC content: 76.91

Gene sequence:

>2451_bases
GTGGACGACCGGGCCGGGATCTTCTCCGCCGCCGAGCTGGAGCGGCTGGAGAACGACCTGACGGGCCGCCGCTTCGGCTT
CCGGGTGATCATCCTGGAGGAGGCGTTCGCCGGGGCGGAACCGGTCGATGCCGAGGCCCGGTTCCAGGCGATGGCTGATG
AACTGCTGGCCGACGTGCCCCGGGATGCCGTACTGATCACCATCGCGATGGAGGAGGGGCTGGTCGACTTCCGGGTCTGG
AGGGACGGCGCCGTGCAGTCCGCCTTCCGGGAGGCGACGGGGCGCGCATTTGAGCGTTCGGTGGAACAGATCATGGACGC
CTTTGTGCCGCCGGCGGCGGAGGGCGACATCGCCGGTGCCATCGTGGCGGCCGCGGACCGGATCGAATCGCTGGCCGCGG
CGCCCGCGGCCCAGCCCTTGCCCGCCACCGGCGGTTCCGGCGCGGGGCGGCCTTCGCCCGGCCCCCGCGGCTCCGGCGTG
GCGCAGCCCGGTGCGGGCGGCGCCGCTGCCCGCACGTCCGCACCGGGCCGCATCGGAGCCGTGCTTGCCGGGCTGGCCGC
GCTGATCGCGGCCGTGGTGGAGCTGGCGCTCTTCCTGCAGTACCGTCGGACACACCGCAAGTGCCTGGAGCTCCGGAACA
GCTTCGTGTCGGACCTGGTGAAGATGCACGAGCAGGACCTGCCGCTGGCCCGCAACTACGACGGGGAGGAGACCCGCGGC
CACGTGACGGCGGCCGCCGCCGCATCCGACCGGGCCTTCGACGCTTACCGGGCCGGCAGTGAGAAGCTGGCCGAAGCCGC
CAGGCTGGCACGCCGCTGGCGCTTCGGCGCCGGCACCCGGGCCCTGGACGAGGTGTACAGGGCCTTCCAGCAGGCCGCGG
CCGCCAACCGGGAGGCCCAGGAGGCCTACGCGCCCGTCTCGGCGGCGATCCTCGGCTGGGACGGCGCGGTCGGCGAGACC
GGGGCCAGGCGGGAGGCGGCCGAGCGGACCCTGGCCGATCTGCAGGACCAGACCGGCTGGGAGTTTCCGGCCCTGCGGGA
ACGGATGGACGCGGCCGCCCGGCTGCAGCAGGCGGCCGAGGCCGCCCGGGGCAAGGACCCGGTTCGGGCGCTGCGGATCA
TGCGGGAGGCGGGGGAGACCTTCGCGGCGATCGGTGCGGACCTGACCCGGCTCAGCGGGCTGCGGGAGGCCTGCGCGGCC
CAGCGGCGGGACGCCGATCAGGCCCGGGCGGAGATCGAGCAGGCCCGGGTGGGGCTCGGATTGCGGTTTGTGGAGGAGGA
CCCGGTCCAGGCGCTGGAGCGGGCGTTGCAGGAGCAGGCCCGGGCTGGGGAGCGGATGGCCCGGGGAGAGGTGGACGGCG
CCGAGCAAGCGCTGGCCGGCGGTCAGGCGGCGCTGGACGAGGCCCGGGCGATCCTCGCCCGGTACCGGGAGGCCGTGGAA
CAGTATCCCGGGAAGCGGCAGGCCCTGGTGGAGGGGGCCGGTTGGCTGGCCGCGCAGCAGGGGCCGGCCCGGAACGTGCT
GGATCAGCTGGCCGCCCGCTACGCCCCGGAGGACTGGGCAGATGTCCGCGACCTGCCCGCGGCCTTGGCGGACCTGGAGC
GGCGGGCGCAGGCGGACCTGGCGGAGGCGGAGCGTTTTGTGCGGCCGGAGGTGCAGCGGCACCTGCAGGCTTACCGGCTG
CTGAACGAACGGCTGGCGGAGCTGGCGGCCCTGCGGGAGCGGGCGGCGCTGCTGACGACCCTTCCCGACCGGCTGGCCGC
CGCGGGGGAGGCGGCGCGGGAGAAGCTCACCCGGGCCGAGCGGGAGTGGGCGGCGGCGAGGGAGCTGGTCTCCCGCGAGG
GGCTCGCCCTGCCCCGGGACGCCGCCGAGCGGGCCGATCGGATCGAGGTGGCGCTGGACCGTGCGCGCCGCCTGCTGGAA
GAGCGGCCTCTGGCCGTGAGCCGGGCGGGCCGGGAGGCCGCCGCCGCGCTGGAGCTGGCGGGCGGCCTGCGCCAGGCCGT
CGCGGAACTGGCCCGGAGGGCGGGAGAGGCGCGGGCGCGCCTCCGGCAGGCCCGGGCCGAGGCAACCGCCGCGCTGGTCC
ACAGCCGGTTCAACCCGGGCGCGGCCGCGGCCCTGCAGCGGGCTCTGGACGCCGGTGAGCAGGCGATGGCTGCCGGCCGG
TACGACCAGGCCGTGGCGGAAGCGGAGTCCGCGCTGCGCAGCGCCCGGGCCTTGGTGGCGGCCTACCAGCGCCACAAGGC
CGAGGAGCGGCGCCGGCAGATGGCGATGGCGGCGGCCGCGGCGCAGGCCATGCGGCGCGCCAGCGAACCCCGCGGGCACT
TCAGGCCCGGTCCCGGCGGTCGCGGCTCGGGCGGCGGAGGAGGCTTCGGCGGCGGTCCCCGGGGCTCCGGCGGCGGCGGC
CGCTTCGGCGGCGGTGGCCGCGGTTCCGGCGGCGGCGGAAGGTGGAAGTAG

Upstream 100 bases:

>100_bases
GCGATCTGTGCGTTCCGTTCCCGCCCTGATCCTGTCCCTGCTGGCAGCACTGCTGTGGGTCGCGGCGCCGGCGGTGGCGG
CCACGAGTTCCGGCGGCGTG

Downstream 100 bases:

>100_bases
CGATCGCGCATCCTACGGGGGAAGCTAAACCGGCTTCCCCTCGTACGCGGTTTGGTGGTAAGGTAATGAAGGTAGATGGA
TCGACCGTCCAGGTAAGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 816; Mature: 816

Protein sequence:

>816_residues
MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVPRDAVLITIAMEEGLVDFRVW
RDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGAIVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGV
AQPGAGGAAARTSAPGRIGAVLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG
HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQEAYAPVSAAILGWDGAVGET
GARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAEAARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAA
QRRDADQARAEIEQARVGLGLRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE
QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADLAEAERFVRPEVQRHLQAYRL
LNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAEREWAAARELVSREGLALPRDAAERADRIEVALDRARRLLE
ERPLAVSRAGREAAAALELAGGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR
YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGGRGSGGGGGFGGGPRGSGGGG
RFGGGGRGSGGGGRWK

Sequences:

>Translated_816_residues
MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVPRDAVLITIAMEEGLVDFRVW
RDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGAIVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGV
AQPGAGGAAARTSAPGRIGAVLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG
HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQEAYAPVSAAILGWDGAVGET
GARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAEAARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAA
QRRDADQARAEIEQARVGLGLRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE
QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADLAEAERFVRPEVQRHLQAYRL
LNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAEREWAAARELVSREGLALPRDAAERADRIEVALDRARRLLE
ERPLAVSRAGREAAAALELAGGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR
YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGGRGSGGGGGFGGGPRGSGGGG
RFGGGGRGSGGGGRWK
>Mature_816_residues
MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVPRDAVLITIAMEEGLVDFRVW
RDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGAIVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGV
AQPGAGGAAARTSAPGRIGAVLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG
HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQEAYAPVSAAILGWDGAVGET
GARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAEAARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAA
QRRDADQARAEIEQARVGLGLRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE
QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADLAEAERFVRPEVQRHLQAYRL
LNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAEREWAAARELVSREGLALPRDAAERADRIEVALDRARRLLE
ERPLAVSRAGREAAAALELAGGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR
YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGGRGSGGGGGFGGGPRGSGGGG
RFGGGGRGSGGGGRWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86798; Mature: 86798

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVP
CCCCCCHHHHHHHHHHHHHHCCCHHCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCC
RDAVLITIAMEEGLVDFRVWRDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGA
CCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGVAQPGAGGAAARTSAPGRIGA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
VLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQ
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH
EAYAPVSAAILGWDGAVGETGARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAE
HHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAAQRRDADQARAEIEQARVGLG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
LRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE
CEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADL
HCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AEAERFVRPEVQRHLQAYRLLNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REWAAARELVSREGLALPRDAAERADRIEVALDRARRLLEERPLAVSRAGREAAAALELA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH
GGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH
YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGSGGGGGFGGGPRGSGGGGRFGGGGRGSGGGGRWK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDDRAGIFSAAELERLENDLTGRRFGFRVIILEEAFAGAEPVDAEARFQAMADELLADVP
CCCCCCHHHHHHHHHHHHHHCCCHHCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHCC
RDAVLITIAMEEGLVDFRVWRDGAVQSAFREATGRAFERSVEQIMDAFVPPAAEGDIAGA
CCEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
IVAAADRIESLAAAPAAQPLPATGGSGAGRPSPGPRGSGVAQPGAGGAAARTSAPGRIGA
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
VLAGLAALIAAVVELALFLQYRRTHRKCLELRNSFVSDLVKMHEQDLPLARNYDGEETRG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
HVTAAAAASDRAFDAYRAGSEKLAEAARLARRWRFGAGTRALDEVYRAFQQAAAANREAQ
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHH
EAYAPVSAAILGWDGAVGETGARREAAERTLADLQDQTGWEFPALRERMDAAARLQQAAE
HHHCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
AARGKDPVRALRIMREAGETFAAIGADLTRLSGLREACAAQRRDADQARAEIEQARVGLG
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
LRFVEEDPVQALERALQEQARAGERMARGEVDGAEQALAGGQAALDEARAILARYREAVE
CEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
QYPGKRQALVEGAGWLAAQQGPARNVLDQLAARYAPEDWADVRDLPAALADLERRAQADL
HCCCHHHHHHHCCCHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AEAERFVRPEVQRHLQAYRLLNERLAELAALRERAALLTTLPDRLAAAGEAAREKLTRAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REWAAARELVSREGLALPRDAAERADRIEVALDRARRLLEERPLAVSRAGREAAAALELA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHH
GGLRQAVAELARRAGEARARLRQARAEATAALVHSRFNPGAAAALQRALDAGEQAMAAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCH
YDQAVAEAESALRSARALVAAYQRHKAEERRRQMAMAAAAAQAMRRASEPRGHFRPGPGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
RGSGGGGGFGGGPRGSGGGGRFGGGGRGSGGGGRWK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA