| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is gufA [H]
Identifier: 51893119
GI number: 51893119
Start: 2118600
End: 2119415
Strand: Reverse
Name: gufA [H]
Synonym: STH1981
Alternate gene names: 51893119
Gene position: 2119415-2118600 (Counterclockwise)
Preceding gene: 51893122
Following gene: 51893118
Centisome position: 59.43
GC content: 68.5
Gene sequence:
>816_bases GTGGTAAGATGCATGCGGGAGGTCGGTAGACCCATGGACTTGGCTGCGAACGCGAACACGATCCTGCTCGGCCTGTTGGC CAGCCTGCTGGCCGGCCTCGCGACGGTGATCGGCGCACTCCCGACACTGTTCACCCGATCGATCTCACCGCGCATCCAGG ACGGCCTGCTGGGCATGGCCGCGGGGGTCATGCTGGCCGCCACGATTTTCAGCCTGCTGATTCCGGCGATGGAGTACGGC GGCGGAGGGCTGCGGGGCGCCCTGGTCGCGGCCGTGGGCCTCTTCGTGGGCGGCGCCTTCCTGGACCTGATCGACCGGTA CTCGCCGCACCAGCACTTCATCAAGGGGCCCGAAGGCGGCGGGGCGACCTCGTCGCTGCAGCGCATCTGGCTGTTCATCA TCGCGATTACGATCCACAACTTCCCGGAGGGACTGGCCGTGGGCGTGGGCGTCGGCAGCGGCGACCTGGGCAGCGGCCTC AGCCTGGCGATGGGCATCGGGCTGCAGAATATCCCCGAGGGCATGGCGGTGGCCCTGGCGCTGCTGTCGGAGCGCTACGC CCTGCGCGAGGTGTTCCTGATCACCCTGCTGACCGGCCTGGTCGAGCCGGTGGGCGGGCTGCTGGGCGTCGCGGCGGTCA CCCTGATGCATCCGATCCTGCCGTGGGCGCTGGCCTTCGCCGGCGGGGCGATGCTGTTCGTCATCAGCGACGAGATCATC CCCGAGACCCACGAGCGGGGCAACGAGCGCACCGCGACGTACATGTTGCTCCTGGGGTTCGTCATCATGATGCTGCTGGA CACGACGCTGGGTTAG
Upstream 100 bases:
>100_bases ACGGCAATCTCCATCTGCTTCACTCCCTCGCCCCATCCTATGCCCGGAAGGCGGAAGGGGTCCGGGGAGGGGAGGCGGCG GTTCCCGATGGCCCGTCAAC
Downstream 100 bases:
>100_bases TCTGTAGGCGCGATTCGGGCCGCCTCCCGTGCGGGAGGCGGCCCGTGTCGGTGTGCCCGGCATGGGCGCTGACTTGGCGG TGAAAGTCCGCTACGGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MVRCMREVGRPMDLAANANTILLGLLASLLAGLATVIGALPTLFTRSISPRIQDGLLGMAAGVMLAATIFSLLIPAMEYG GGGLRGALVAAVGLFVGGAFLDLIDRYSPHQHFIKGPEGGGATSSLQRIWLFIIAITIHNFPEGLAVGVGVGSGDLGSGL SLAMGIGLQNIPEGMAVALALLSERYALREVFLITLLTGLVEPVGGLLGVAAVTLMHPILPWALAFAGGAMLFVISDEII PETHERGNERTATYMLLLGFVIMMLLDTTLG
Sequences:
>Translated_271_residues MVRCMREVGRPMDLAANANTILLGLLASLLAGLATVIGALPTLFTRSISPRIQDGLLGMAAGVMLAATIFSLLIPAMEYG GGGLRGALVAAVGLFVGGAFLDLIDRYSPHQHFIKGPEGGGATSSLQRIWLFIIAITIHNFPEGLAVGVGVGSGDLGSGL SLAMGIGLQNIPEGMAVALALLSERYALREVFLITLLTGLVEPVGGLLGVAAVTLMHPILPWALAFAGGAMLFVISDEII PETHERGNERTATYMLLLGFVIMMLLDTTLG >Mature_271_residues MVRCMREVGRPMDLAANANTILLGLLASLLAGLATVIGALPTLFTRSISPRIQDGLLGMAAGVMLAATIFSLLIPAMEYG GGGLRGALVAAVGLFVGGAFLDLIDRYSPHQHFIKGPEGGGATSSLQRIWLFIIAITIHNFPEGLAVGVGVGSGDLGSGL SLAMGIGLQNIPEGMAVALALLSERYALREVFLITLLTGLVEPVGGLLGVAAVTLMHPILPWALAFAGGAMLFVISDEII PETHERGNERTATYMLLLGFVIMMLLDTTLG
Specific function: Mediates Zinc Uptake. May Also Transport Other Divalent Cations Such As Copper And Cadmium Ions. [C]
COG id: COG0428
COG function: function code P; Predicted divalent heavy-metal cations transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI229577422, Length=154, Percent_Identity=51.9480519480519, Blast_Score=146, Evalue=2e-35, Organism=Homo sapiens, GI229577418, Length=154, Percent_Identity=51.9480519480519, Blast_Score=146, Evalue=2e-35, Organism=Escherichia coli, GI1789419, Length=250, Percent_Identity=31.2, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17507805, Length=154, Percent_Identity=48.7012987012987, Blast_Score=145, Evalue=2e-35, Organism=Drosophila melanogaster, GI24652846, Length=155, Percent_Identity=47.0967741935484, Blast_Score=141, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003689 [H]
Pfam domain/function: PF02535 Zip [H]
EC number: NA
Molecular weight: Translated: 28175; Mature: 28175
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRCMREVGRPMDLAANANTILLGLLASLLAGLATVIGALPTLFTRSISPRIQDGLLGMA CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AGVMLAATIFSLLIPAMEYGGGGLRGALVAAVGLFVGGAFLDLIDRYSPHQHFIKGPEGG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC GATSSLQRIWLFIIAITIHNFPEGLAVGVGVGSGDLGSGLSLAMGIGLQNIPEGMAVALA CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHCCHHHCCHHHHHHHH LLSERYALREVFLITLLTGLVEPVGGLLGVAAVTLMHPILPWALAFAGGAMLFVISDEII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHC PETHERGNERTATYMLLLGFVIMMLLDTTLG CCHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVRCMREVGRPMDLAANANTILLGLLASLLAGLATVIGALPTLFTRSISPRIQDGLLGMA CCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH AGVMLAATIFSLLIPAMEYGGGGLRGALVAAVGLFVGGAFLDLIDRYSPHQHFIKGPEGG HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC GATSSLQRIWLFIIAITIHNFPEGLAVGVGVGSGDLGSGLSLAMGIGLQNIPEGMAVALA CHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHCCHHHCCHHHHHHHH LLSERYALREVFLITLLTGLVEPVGGLLGVAAVTLMHPILPWALAFAGGAMLFVISDEII HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHC PETHERGNERTATYMLLLGFVIMMLLDTTLG CCHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934835 [H]