| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893061
Identifier: 51893061
GI number: 51893061
Start: 2066859
End: 2067197
Strand: Reverse
Name: 51893061
Synonym: STH1923
Alternate gene names: NA
Gene position: 2067197-2066859 (Counterclockwise)
Preceding gene: 51893062
Following gene: 51893060
Centisome position: 57.97
GC content: 73.16
Gene sequence:
>339_bases GTGATCGTGCGCAACCTTACGCGCGGCCTTGTCCTGGGCGACCGGATCCGCCGGGCCGACACCTTCCGGCTGCGCCTGCT CGGCCTCATGTTCCGCCCGGGGCTGGAGCCGGGCGAGGGGCTCTGGCTGGAGCCCTGCTGCCAGGTGCACACCCACTTCA TGCGGTTCCCCCTGGACCTGCTCTTCCTGGACGCGGAAGGGCGGGTCCTGCGCGCGCTGGCGTCCTTTCCCCCGCGGCGC ATCAGTCCGGCCGTTCCCGGAGCCCGGGCCGTGCTGGAACTCCCGGCCGGGGCGATGGGGGAGACCCGGCCGGGGGACCT GGTGAGGGCTTTCCCATAG
Upstream 100 bases:
>100_bases CCCACGGCGCACCGCCCACGGCGCACCGCCCACGGCGCACCGCCCACGGCGCATCGCCCACGGCCCACCGCTCACCGCTC AAAGGGGAGGTCGACCGCCA
Downstream 100 bases:
>100_bases CAGGAGTATTGGTTGCCCGCAGGGAATATTGTTACCGGCAATCCCCACAAGAGGTCTGCGAGTGGACCGGCGGGGACAGA GCGCACAGCGGGCCGAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MIVRNLTRGLVLGDRIRRADTFRLRLLGLMFRPGLEPGEGLWLEPCCQVHTHFMRFPLDLLFLDAEGRVLRALASFPPRR ISPAVPGARAVLELPAGAMGETRPGDLVRAFP
Sequences:
>Translated_112_residues MIVRNLTRGLVLGDRIRRADTFRLRLLGLMFRPGLEPGEGLWLEPCCQVHTHFMRFPLDLLFLDAEGRVLRALASFPPRR ISPAVPGARAVLELPAGAMGETRPGDLVRAFP >Mature_112_residues MIVRNLTRGLVLGDRIRRADTFRLRLLGLMFRPGLEPGEGLWLEPCCQVHTHFMRFPLDLLFLDAEGRVLRALASFPPRR ISPAVPGARAVLELPAGAMGETRPGDLVRAFP
Specific function: Unknown
COG id: COG1430
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12500; Mature: 12500
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRNLTRGLVLGDRIRRADTFRLRLLGLMFRPGLEPGEGLWLEPCCQVHTHFMRFPLDL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEE LFLDAEGRVLRALASFPPRRISPAVPGARAVLELPAGAMGETRPGDLVRAFP EEECCCCHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCEEECCC >Mature Secondary Structure MIVRNLTRGLVLGDRIRRADTFRLRLLGLMFRPGLEPGEGLWLEPCCQVHTHFMRFPLDL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCEEE LFLDAEGRVLRALASFPPRRISPAVPGARAVLELPAGAMGETRPGDLVRAFP EEECCCCHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA