| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892934
Identifier: 51892934
GI number: 51892934
Start: 1939440
End: 1940201
Strand: Reverse
Name: 51892934
Synonym: STH1796
Alternate gene names: NA
Gene position: 1940201-1939440 (Counterclockwise)
Preceding gene: 51892935
Following gene: 51892933
Centisome position: 54.41
GC content: 75.33
Gene sequence:
>762_bases ATGACGGAGCAGGAGTGGCAGCAGCATCCGGAGCGCGAGGTGCCGGCGCTTCCGGGGCAGGAACCGCACTTCCCGGGCGG CGACCCCGGCGGGCGGCCGCAGGGGATCCACCCGGGCCGGTCGGAGGGGCAGGCGGCGCTCTCGTCAGGGGACTCCGTTC CGGTGCTTGTGGCGTGGTTCGCCGACGCGTCCAGCGCCCGGGCCTGTCTCCGCGCCCTGGAGCTGCGCGGCGTGGGGGTG ACGCTGGCGGAGGAGGCGCCGCCTGGGCACACGGGGCCTGTGGCGATCCATGCCAGTCCTTCGGTCGGCGAGAAGGACCC CGTCATGACCGAACGGGGGATGGGGCGCGGGGCCGTGCTCGGCGCCACGGTGGGCGCGACGGCGGGGTTCCTGGCTGCCA CCTACCTGGTGCCGCCGCTGGGCGCCGCCTCGGCCACCGGCGCCATGCTGACCACACTGGCCGGCGCCGGGTTGGGCAGC TTCTTCGGCAACCTGGCCGACCAGGCCAGGGATGACAGCGGGAACCCGGCGGGCCAGGGAGGCGATGCCGCAGCGGCCCA GGAGAGTGCGACCCTGCGGTTCCGTCTGGAGGTCTCCGCGCGCCCAACCCAGGTTGACGAGGTGATGGCGCTGGTGTCCG CTTGGGATCCGGAGGAGATGCGGCTGCTGCCCACAGGCGCGGGGGAGGCGCGGGGGTATCCGGCCGGGCGCCGGGGAGAT GGGGACGGCGGTCGGATCCCCGTGGAGGGCGGGCCGGCATAG
Upstream 100 bases:
>100_bases GAGGAGGGGCGGCTGCGGGACCCGGTGGTGGTCGGGTTTTCGGCCGAGCCGCCGGAGGCGGCGGTGATCCCGTAAGAGAC GCAGCGAGGAGGAAAGTCGG
Downstream 100 bases:
>100_bases TGGCCAGAACCGAGAGGCGGTGGGTACGGGTCGGCGGGCGGGAGCTGGCGGTGACCAACCTGGAGAAGCCCATGTGGCCG GCCGACGGGCTGACCAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MTEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWFADASSARACLRALELRGVGV TLAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVLGATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGS FFGNLADQARDDSGNPAGQGGDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGD GDGGRIPVEGGPA
Sequences:
>Translated_253_residues MTEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWFADASSARACLRALELRGVGV TLAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVLGATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGS FFGNLADQARDDSGNPAGQGGDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGD GDGGRIPVEGGPA >Mature_252_residues TEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWFADASSARACLRALELRGVGVT LAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVLGATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGSF FGNLADQARDDSGNPAGQGGDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGDG DGGRIPVEGGPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25541; Mature: 25409
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWF CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEE ADASSARACLRALELRGVGVTLAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVL CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCEEE GATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGSFFGNLADQARDDSGNPAGQG EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC GDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGD CCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC GDGGRIPVEGGPA CCCCEECCCCCCC >Mature Secondary Structure TEQEWQQHPEREVPALPGQEPHFPGGDPGGRPQGIHPGRSEGQAALSSGDSVPVLVAWF CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEEEE ADASSARACLRALELRGVGVTLAEEAPPGHTGPVAIHASPSVGEKDPVMTERGMGRGAVL CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHCCCCCCEEE GATVGATAGFLAATYLVPPLGAASATGAMLTTLAGAGLGSFFGNLADQARDDSGNPAGQG EHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC GDAAAAQESATLRFRLEVSARPTQVDEVMALVSAWDPEEMRLLPTGAGEARGYPAGRRGD CCCHHHCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCC GDGGRIPVEGGPA CCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA