Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892906

Identifier: 51892906

GI number: 51892906

Start: 1913103

End: 1914449

Strand: Reverse

Name: 51892906

Synonym: STH1768

Alternate gene names: NA

Gene position: 1914449-1913103 (Counterclockwise)

Preceding gene: 51892907

Following gene: 51892905

Centisome position: 53.68

GC content: 74.09

Gene sequence:

>1347_bases
TTGGCCGCGCTGGTGGAGACCGCGGCGGCCCTCCCGTGGATGCTTTTCCTCTACGCGGCGGACGGTGAGGCGGGCTGGTT
CGAGGCTGTGCCCGGTGCGTGGCTGCCGCTCGCCGTCTTCCTGACCGCGGCGGTGTGGGAGTCGGGAAGCCGGGGCGACG
CGCGCCCCGCGCGCGTCGGGGCCCTGGTGGCGGGCGCCGCCCTGGCCTACCTGGCGGCGTACGCCCTCCTGCCGGCGCCG
CTGCGGACCGGGGTGTTCGGCCTCAACCCGGCGCTGGCCTTCGTGCCCGTGGCCGTTTACCTCTGGTACGCCGGGGCCAG
CTGCGCCCTGGAGGGGCTGGAGTACGGCCGCCTCTTCGAGCGGGCGTGGCGGCTGTTCGGCGGGCAGCTGGCCGGCATCG
TGTGTCTCCTGCTGCTGGGCGAGGCGCGGTCCGGCCCGGTGCAACTGGTACTGGGATGGTCCGTGGTGCTGCTGTTCGGG
GCCGGCCTCTCGCTGTTGATCCTGACCCGGGAGCGGGCTCTGCTGGGCGCCTTCGATGCGGAGGAGCAGGCCGCGGAGCC
CACATCCCCCGCTGTGACCGGCTTCGTGCTGGCCCTGCTCGCCGGGACGGTCGCGGCGTCCGCTGTGCTGACGGTGGACC
GGGTGGCGACGCTCCTGCGCGCGGTCGGCCGGCTCGTGGCGCCGGTCTACAACGTCCTGGTCCAGGTCGCAGCGTATCTC
GCCATGGGCGTCGCCATGCTCCTGGAGCCTCTGTTCAACCTGCTGAAGTGGCTGGCATCCCAGCAGGAGCCGACGGAGCA
GGGGGGAGGCGAGGACGTTGCGCCGGGCCCGCCCGACCTGCCCCCGGATGCCGGGGCGCAGCTGGATCTGGAGCCCGTGC
TGAAGGCCGGGTTGATCCTGGTGGCGGTAGCGCTGGCGGCCCTGCTGCTGTGGCGCATGAGCGCCGTGCGGCGGCGCACG
TCCGAGGTGGACGAGGAGCGGACCAACCTCGGCTTCTGGGCCTCGCTCTGGCAGGACCTGCGGGGGCTGCTGCAAGCGCG
CCGAACCGCAGGGGCGGTGGGAGACGGCGCCGGGGAGGAACCGGTTCCGCCCGGCAGCGCCCGGGAGCTTTACCGGCGGC
TGCAGCGGTGGGGTTCCTCGCGGGTGCGCCCCCGGCGGCCGGCCGAGACCCCCAACGCGTATCGGTCGGCGCTGGCCGGC
GCGCAGCCTCGGGCTGCCGACGCGGTCGACGCCGTGACCGCGGTCTACAACCAGGAGCGCTACGGCAGCCGGCCGCCGGA
TGCGGAGACGGTTGCAGAGGCCGCAGCGCTTTGGGAGGCCAGTTGCGAACGGGACTTCACTGTGTAA

Upstream 100 bases:

>100_bases
GTGCCGGAGCTGCCGGGGGTCCGGGTCTACCGCGTGGGCGGAGAGGAGGGGCTGCATGGCGCGGTTCTGGCGGAGTAGGG
GCCTCTGGGTCCGGTGGCTG

Downstream 100 bases:

>100_bases
TCGCCTTAACTTATAATGAATGGGAAGGCAACATGCGCCTTCCCATTCTTTGTGCGAATCGGATCTCGCCGGCGATGCGA
GGGCCGACCCGGAGGGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MAALVETAAALPWMLFLYAADGEAGWFEAVPGAWLPLAVFLTAAVWESGSRGDARPARVGALVAGAALAYLAAYALLPAP
LRTGVFGLNPALAFVPVAVYLWYAGASCALEGLEYGRLFERAWRLFGGQLAGIVCLLLLGEARSGPVQLVLGWSVVLLFG
AGLSLLILTRERALLGAFDAEEQAAEPTSPAVTGFVLALLAGTVAASAVLTVDRVATLLRAVGRLVAPVYNVLVQVAAYL
AMGVAMLLEPLFNLLKWLASQQEPTEQGGGEDVAPGPPDLPPDAGAQLDLEPVLKAGLILVAVALAALLLWRMSAVRRRT
SEVDEERTNLGFWASLWQDLRGLLQARRTAGAVGDGAGEEPVPPGSARELYRRLQRWGSSRVRPRRPAETPNAYRSALAG
AQPRAADAVDAVTAVYNQERYGSRPPDAETVAEAAALWEASCERDFTV

Sequences:

>Translated_448_residues
MAALVETAAALPWMLFLYAADGEAGWFEAVPGAWLPLAVFLTAAVWESGSRGDARPARVGALVAGAALAYLAAYALLPAP
LRTGVFGLNPALAFVPVAVYLWYAGASCALEGLEYGRLFERAWRLFGGQLAGIVCLLLLGEARSGPVQLVLGWSVVLLFG
AGLSLLILTRERALLGAFDAEEQAAEPTSPAVTGFVLALLAGTVAASAVLTVDRVATLLRAVGRLVAPVYNVLVQVAAYL
AMGVAMLLEPLFNLLKWLASQQEPTEQGGGEDVAPGPPDLPPDAGAQLDLEPVLKAGLILVAVALAALLLWRMSAVRRRT
SEVDEERTNLGFWASLWQDLRGLLQARRTAGAVGDGAGEEPVPPGSARELYRRLQRWGSSRVRPRRPAETPNAYRSALAG
AQPRAADAVDAVTAVYNQERYGSRPPDAETVAEAAALWEASCERDFTV
>Mature_447_residues
AALVETAAALPWMLFLYAADGEAGWFEAVPGAWLPLAVFLTAAVWESGSRGDARPARVGALVAGAALAYLAAYALLPAPL
RTGVFGLNPALAFVPVAVYLWYAGASCALEGLEYGRLFERAWRLFGGQLAGIVCLLLLGEARSGPVQLVLGWSVVLLFGA
GLSLLILTRERALLGAFDAEEQAAEPTSPAVTGFVLALLAGTVAASAVLTVDRVATLLRAVGRLVAPVYNVLVQVAAYLA
MGVAMLLEPLFNLLKWLASQQEPTEQGGGEDVAPGPPDLPPDAGAQLDLEPVLKAGLILVAVALAALLLWRMSAVRRRTS
EVDEERTNLGFWASLWQDLRGLLQARRTAGAVGDGAGEEPVPPGSARELYRRLQRWGSSRVRPRRPAETPNAYRSALAGA
QPRAADAVDAVTAVYNQERYGSRPPDAETVAEAAALWEASCERDFTV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47387; Mature: 47256

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS00296 CHAPERONINS_CPN60

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALVETAAALPWMLFLYAADGEAGWFEAVPGAWLPLAVFLTAAVWESGSRGDARPARVG
CCHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
ALVAGAALAYLAAYALLPAPLRTGVFGLNPALAFVPVAVYLWYAGASCALEGLEYGRLFE
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
RAWRLFGGQLAGIVCLLLLGEARSGPVQLVLGWSVVLLFGAGLSLLILTRERALLGAFDA
HHHHHHCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
EEQAAEPTSPAVTGFVLALLAGTVAASAVLTVDRVATLLRAVGRLVAPVYNVLVQVAAYL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMGVAMLLEPLFNLLKWLASQQEPTEQGGGEDVAPGPPDLPPDAGAQLDLEPVLKAGLIL
HHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VAVALAALLLWRMSAVRRRTSEVDEERTNLGFWASLWQDLRGLLQARRTAGAVGDGAGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVPPGSARELYRRLQRWGSSRVRPRRPAETPNAYRSALAGAQPRAADAVDAVTAVYNQER
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YGSRPPDAETVAEAAALWEASCERDFTV
CCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AALVETAAALPWMLFLYAADGEAGWFEAVPGAWLPLAVFLTAAVWESGSRGDARPARVG
CHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
ALVAGAALAYLAAYALLPAPLRTGVFGLNPALAFVPVAVYLWYAGASCALEGLEYGRLFE
HHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
RAWRLFGGQLAGIVCLLLLGEARSGPVQLVLGWSVVLLFGAGLSLLILTRERALLGAFDA
HHHHHHCHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
EEQAAEPTSPAVTGFVLALLAGTVAASAVLTVDRVATLLRAVGRLVAPVYNVLVQVAAYL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMGVAMLLEPLFNLLKWLASQQEPTEQGGGEDVAPGPPDLPPDAGAQLDLEPVLKAGLIL
HHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
VAVALAALLLWRMSAVRRRTSEVDEERTNLGFWASLWQDLRGLLQARRTAGAVGDGAGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVPPGSARELYRRLQRWGSSRVRPRRPAETPNAYRSALAGAQPRAADAVDAVTAVYNQER
CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
YGSRPPDAETVAEAAALWEASCERDFTV
CCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA