| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892846
Identifier: 51892846
GI number: 51892846
Start: 1855703
End: 1856242
Strand: Reverse
Name: 51892846
Synonym: STH1708
Alternate gene names: NA
Gene position: 1856242-1855703 (Counterclockwise)
Preceding gene: 51892849
Following gene: 51892840
Centisome position: 52.05
GC content: 70.74
Gene sequence:
>540_bases GTGGCCGCCGCCGGCGGCCTGGTCGCGGCCGTAATCTGGCTGGGGACGGACCGGGACGACCGGCTGAGCCACACCCTGGT CCGCCCCGCCGTCATGGCCCTGCTCAGCCTCCTGCTGCTCGTGATCCTCGCCGAGGCGGAGTTCTGGGCCTACAGCCTCT CCGCCGCCGCCGCAGGGATCGGGCTGTGGGAGAGCTACCTGGGCGCCTATCTGCTCATGTCGGCGCCCGTGAGCCGCACC GGCCCCGTGGCCCAGGTGCGCACCACGGCCCGCTGGCTGCTCAACACCCTGGCCAACCTGATGTTGCTGAACCTTTCCGC CCAGCTGGCCTTTCCGCACACCTTCGAGTGGCGCGGCATCCCGGCCTCGGCCCTGGACGTGGCGTACTTCACCGTCCTCA CCTTCGCATCGGGAGGGTACGGCGACGTGCTCCCGGCCAGCCCGCTGGGCAAGCTGCTGGCCATGCTCACCAGCGTGAGC GGCCTGCTGTTTGCGACGATCCTGTTCGCCGCGCTCTTCCACCGTCTGCGGGAGGAGTGA
Upstream 100 bases:
>100_bases GGATATTCAGCGGGAACGGGGGCTAGTACACCCGGCATGCGGGCGGGGTGGACGGGCGTATGGAACAGCGGGAGGAAGTG CGATGGGTCACCTGCTGTTC
Downstream 100 bases:
>100_bases GAGACGAACGAACCGGCCGGGGAACCCCCCGGCCGGCGTCGGGCCTCAGCGGGTGAACGGCTCCGACAGCGCGGTCACCC GGTCCATGACCTCCTGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGIGLWESYLGAYLLMSAPVSRT GPVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGIPASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVS GLLFATILFAALFHRLREE
Sequences:
>Translated_179_residues MAAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGIGLWESYLGAYLLMSAPVSRT GPVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGIPASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVS GLLFATILFAALFHRLREE >Mature_178_residues AAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGIGLWESYLGAYLLMSAPVSRTG PVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGIPASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVSG LLFATILFAALFHRLREE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19120; Mature: 18988
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGI CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLWESYLGAYLLMSAPVSRTGPVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVSGLLFATILFAALFHRLREE CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AAAGGLVAAVIWLGTDRDDRLSHTLVRPAVMALLSLLLLVILAEAEFWAYSLSAAAAGI CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLWESYLGAYLLMSAPVSRTGPVAQVRTTARWLLNTLANLMLLNLSAQLAFPHTFEWRGI HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC PASALDVAYFTVLTFASGGYGDVLPASPLGKLLAMLTSVSGLLFATILFAALFHRLREE CHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA