| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892815
Identifier: 51892815
GI number: 51892815
Start: 1821152
End: 1823134
Strand: Reverse
Name: 51892815
Synonym: STH1677
Alternate gene names: NA
Gene position: 1823134-1821152 (Counterclockwise)
Preceding gene: 51892826
Following gene: 51892814
Centisome position: 51.12
GC content: 71.91
Gene sequence:
>1983_bases ATGCAACTCGACACTGCCGCGTGGGTCTACCTGGTGGCCGTGGGACTCCACCTCTTCTTCTTCCTTCTGTTCCTGCGCCT GCTCTGGTGGAAGCGCTACGCCGACACCCGGTACTGGAAGCGCAGGCCCGCGCTGTCCCTGGAGCGGGTGACCGCGCGCG CCCGCGAGCACGGCATCGCCCTGCCCCGCGTCTCCCTGATCGTGCCGGCCCGCAACGAGGCCGACGTCATCGAGCGCACC GTGGACCACCTGGCCGGCCTCACCTACCCGCCGCACCTGTATGAAGTGCTGGTGGTCACCGACGAGAAGGAGGCGCAGGC CGCCGCGGAGAGCCGGACCGCCGCGGTGACCGGGGCCGCCCGCGCCCTCCGCGGCTGCGCGGACGTGCCCGACCCCGACA CCCAGGCCGGCGGGCTGATCATGGCGCTGGTGGCCGGCCTGGCGCTGGACGGCATCGGAGAGGTCTCCCGCCGGCTGGGA CCCAACGAGGGGCTGCGGCACCTGAAACGCATCCCTGCTCCGCTGCTGCGGCCCATCATCTGGGACGCCGCGTGCCGGCT GCTCCGCAAGGGCTCTCGCGGCGTGGACCACCACGTGGTGCGGTCGCTGCGCAGCCGGCTCCCCGGTCTCGGGCAGGAGC CGCTCCAGCGCGCCTACGCCGCCCTTCTCTCCCTGGCCATCCCGTGCGCCGTCGCTTTCGCCTCGCTGCGCGGCGAGGAC GGCGCCGCGCTGGGCCGCCGGCTGGCATCGCTGGCCGCCCAGGCGCACCACTCCCTGACCCGGGAGCTAATTCTCTCCCT CTGCACCGCGCTGGCAGCCAACCTGACCGCGCGCCTCGAGGCGCTGGCGGCCGACCCGCAGCTGGAGCAGCGGCTGGCCG ATGCCTACCGCGAGGTCTACCCGACCACCCAGGACATCATGGAGCGGAAGGTCGCCGAGTACAGCCGGCGCAAGGACGCC CCGGCGGTCAGGCACGTGGTTGTGCCCGCCGACTTCGACGGCCGGCTCGGCGGCCGGCGGCTTGGCGTCCCGGTGCCCTC CACCAAGGGCCGGGCCCTCAACTGGGCCCTGGGGTTCATCGACGGGCGCTCCACCTGGTGCGGCTTCTACGACGCCGAAA GCCGGCCGGACTCCCGGGTGCTCCTCTACCTCGCCCACCGGGTGGTGGAGGCCCGCGCTGCCGACGTCCCGCTGCCCCGC ATCTTCCAGGGGCCGGTCTTCCAGGTTCGGAACTGGTACGACATGGGGGCCTTCTGCAAGCTGGCCTCCCTCTTCACCGC CATCAGCCACGAGTGGCACCTGCCGGTGGTCTACCGGAGCATCCCCTTCGTCGGCGGCACCAACGTCTTCGTCGAGACCA GGCTGCTGGTCGAGATCGGCGGGTTCGATTCCACCACCCTGACCGAGGACCTGGAGCTGGGCACCCGGGCCTGGCTGAAG GCGCGCGCCTGGCCGGAGTACCTGCCTTACCCCTCCAGCGAGCAGACGCCGCCGACCTTCATGGGCTTCTACCGGCAGCG GCTCCGCTGGGCCAGCGGCCACATCCAGGTCATGCGCAAGATCCGGGCGGAGGGCGACGGCTCCCCCGAGCAGCGCCGCC TGCTCCGGTCGCTCTGGTTCAAGGGCCAGGGCCAGTGGCTGTTCTACCAGGCGGCCACCCTGGTGCCGCTCACCGTGCTG ATCCTGTGGGCGCTGGGGCTGGTGGATCCCACCGTCCTGCCGCCGGCGTGGCGGTACGGCCTCCACATGGTCTCCACGGT CTACATCGGGTTCGCCGTGTACATCTTCCTACGGTACATGCGCTACGTCGACCCGGCCAGCCGGCCGATGATGTGGCTGG GACAGCTGGGGGCCGTGGGGCAGATCCTGGTGCTGCCCCTGGCCGGCTTCCTGTTCCCGGTGCCCTACTTCAGCGCGCTG GTGCTCGCCGCGGTGGGGAAGGGCCCCAGCCACTGGGTGAAGACCCCGCGCACGAGGGAGTGA
Upstream 100 bases:
>100_bases ATACAGAACCCGCCGAATCCGAGCACGCGCTCCGGGGCATAATCGCCACAGGGTTCTGCCAACCTATGGCTGTCATCACC CTGTGGGAGGGTCCCGCACG
Downstream 100 bases:
>100_bases TCGATCGGATGGGCGTACGTCCGACCCGGGACGCGCTACGCGGACGCGCCCCGGCGCCGGCGGGCCGCCGCCGGCGCGTG GCGATGCTTCTGTCGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIALPRVSLIVPARNEADVIERT VDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAARALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLG PNEGLRHLKRIPAPLLRPIIWDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVYPTTQDIMERKVAEYSRRKDA PAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFIDGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPR IFQGPVFQVRNWYDMGAFCKLASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWFKGQGQWLFYQAATLVPLTVL ILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYMRYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSAL VLAAVGKGPSHWVKTPRTRE
Sequences:
>Translated_660_residues MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIALPRVSLIVPARNEADVIERT VDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAARALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLG PNEGLRHLKRIPAPLLRPIIWDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVYPTTQDIMERKVAEYSRRKDA PAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFIDGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPR IFQGPVFQVRNWYDMGAFCKLASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWFKGQGQWLFYQAATLVPLTVL ILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYMRYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSAL VLAAVGKGPSHWVKTPRTRE >Mature_660_residues MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIALPRVSLIVPARNEADVIERT VDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAARALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLG PNEGLRHLKRIPAPLLRPIIWDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVYPTTQDIMERKVAEYSRRKDA PAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFIDGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPR IFQGPVFQVRNWYDMGAFCKLASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWFKGQGQWLFYQAATLVPLTVL ILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYMRYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSAL VLAAVGKGPSHWVKTPRTRE
Specific function: Unknown
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73659; Mature: 73659
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC LPRVSLIVPARNEADVIERTVDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAA CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH RALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLGPNEGLRHLKRIPAPLLRPII HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHH WDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC PTTQDIMERKVAEYSRRKDAPAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFI CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEEEE DGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPRIFQGPVFQVRNWYDMGAFCK CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCHHHHHHHHH LASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK HHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHH ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWF HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC KGQGQWLFYQAATLVPLTVLILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYM CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSALVLAAVGKGPSHWVKTPRTRE HHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC >Mature Secondary Structure MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC LPRVSLIVPARNEADVIERTVDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAA CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH RALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLGPNEGLRHLKRIPAPLLRPII HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHH WDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC PTTQDIMERKVAEYSRRKDAPAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFI CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEEEE DGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPRIFQGPVFQVRNWYDMGAFCK CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCHHHHHHHHH LASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK HHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHH ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWF HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC KGQGQWLFYQAATLVPLTVLILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYM CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSALVLAAVGKGPSHWVKTPRTRE HHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA