Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51892815

Identifier: 51892815

GI number: 51892815

Start: 1821152

End: 1823134

Strand: Reverse

Name: 51892815

Synonym: STH1677

Alternate gene names: NA

Gene position: 1823134-1821152 (Counterclockwise)

Preceding gene: 51892826

Following gene: 51892814

Centisome position: 51.12

GC content: 71.91

Gene sequence:

>1983_bases
ATGCAACTCGACACTGCCGCGTGGGTCTACCTGGTGGCCGTGGGACTCCACCTCTTCTTCTTCCTTCTGTTCCTGCGCCT
GCTCTGGTGGAAGCGCTACGCCGACACCCGGTACTGGAAGCGCAGGCCCGCGCTGTCCCTGGAGCGGGTGACCGCGCGCG
CCCGCGAGCACGGCATCGCCCTGCCCCGCGTCTCCCTGATCGTGCCGGCCCGCAACGAGGCCGACGTCATCGAGCGCACC
GTGGACCACCTGGCCGGCCTCACCTACCCGCCGCACCTGTATGAAGTGCTGGTGGTCACCGACGAGAAGGAGGCGCAGGC
CGCCGCGGAGAGCCGGACCGCCGCGGTGACCGGGGCCGCCCGCGCCCTCCGCGGCTGCGCGGACGTGCCCGACCCCGACA
CCCAGGCCGGCGGGCTGATCATGGCGCTGGTGGCCGGCCTGGCGCTGGACGGCATCGGAGAGGTCTCCCGCCGGCTGGGA
CCCAACGAGGGGCTGCGGCACCTGAAACGCATCCCTGCTCCGCTGCTGCGGCCCATCATCTGGGACGCCGCGTGCCGGCT
GCTCCGCAAGGGCTCTCGCGGCGTGGACCACCACGTGGTGCGGTCGCTGCGCAGCCGGCTCCCCGGTCTCGGGCAGGAGC
CGCTCCAGCGCGCCTACGCCGCCCTTCTCTCCCTGGCCATCCCGTGCGCCGTCGCTTTCGCCTCGCTGCGCGGCGAGGAC
GGCGCCGCGCTGGGCCGCCGGCTGGCATCGCTGGCCGCCCAGGCGCACCACTCCCTGACCCGGGAGCTAATTCTCTCCCT
CTGCACCGCGCTGGCAGCCAACCTGACCGCGCGCCTCGAGGCGCTGGCGGCCGACCCGCAGCTGGAGCAGCGGCTGGCCG
ATGCCTACCGCGAGGTCTACCCGACCACCCAGGACATCATGGAGCGGAAGGTCGCCGAGTACAGCCGGCGCAAGGACGCC
CCGGCGGTCAGGCACGTGGTTGTGCCCGCCGACTTCGACGGCCGGCTCGGCGGCCGGCGGCTTGGCGTCCCGGTGCCCTC
CACCAAGGGCCGGGCCCTCAACTGGGCCCTGGGGTTCATCGACGGGCGCTCCACCTGGTGCGGCTTCTACGACGCCGAAA
GCCGGCCGGACTCCCGGGTGCTCCTCTACCTCGCCCACCGGGTGGTGGAGGCCCGCGCTGCCGACGTCCCGCTGCCCCGC
ATCTTCCAGGGGCCGGTCTTCCAGGTTCGGAACTGGTACGACATGGGGGCCTTCTGCAAGCTGGCCTCCCTCTTCACCGC
CATCAGCCACGAGTGGCACCTGCCGGTGGTCTACCGGAGCATCCCCTTCGTCGGCGGCACCAACGTCTTCGTCGAGACCA
GGCTGCTGGTCGAGATCGGCGGGTTCGATTCCACCACCCTGACCGAGGACCTGGAGCTGGGCACCCGGGCCTGGCTGAAG
GCGCGCGCCTGGCCGGAGTACCTGCCTTACCCCTCCAGCGAGCAGACGCCGCCGACCTTCATGGGCTTCTACCGGCAGCG
GCTCCGCTGGGCCAGCGGCCACATCCAGGTCATGCGCAAGATCCGGGCGGAGGGCGACGGCTCCCCCGAGCAGCGCCGCC
TGCTCCGGTCGCTCTGGTTCAAGGGCCAGGGCCAGTGGCTGTTCTACCAGGCGGCCACCCTGGTGCCGCTCACCGTGCTG
ATCCTGTGGGCGCTGGGGCTGGTGGATCCCACCGTCCTGCCGCCGGCGTGGCGGTACGGCCTCCACATGGTCTCCACGGT
CTACATCGGGTTCGCCGTGTACATCTTCCTACGGTACATGCGCTACGTCGACCCGGCCAGCCGGCCGATGATGTGGCTGG
GACAGCTGGGGGCCGTGGGGCAGATCCTGGTGCTGCCCCTGGCCGGCTTCCTGTTCCCGGTGCCCTACTTCAGCGCGCTG
GTGCTCGCCGCGGTGGGGAAGGGCCCCAGCCACTGGGTGAAGACCCCGCGCACGAGGGAGTGA

Upstream 100 bases:

>100_bases
ATACAGAACCCGCCGAATCCGAGCACGCGCTCCGGGGCATAATCGCCACAGGGTTCTGCCAACCTATGGCTGTCATCACC
CTGTGGGAGGGTCCCGCACG

Downstream 100 bases:

>100_bases
TCGATCGGATGGGCGTACGTCCGACCCGGGACGCGCTACGCGGACGCGCCCCGGCGCCGGCGGGCCGCCGCCGGCGCGTG
GCGATGCTTCTGTCGGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIALPRVSLIVPARNEADVIERT
VDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAARALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLG
PNEGLRHLKRIPAPLLRPIIWDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED
GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVYPTTQDIMERKVAEYSRRKDA
PAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFIDGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPR
IFQGPVFQVRNWYDMGAFCKLASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK
ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWFKGQGQWLFYQAATLVPLTVL
ILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYMRYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSAL
VLAAVGKGPSHWVKTPRTRE

Sequences:

>Translated_660_residues
MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIALPRVSLIVPARNEADVIERT
VDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAARALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLG
PNEGLRHLKRIPAPLLRPIIWDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED
GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVYPTTQDIMERKVAEYSRRKDA
PAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFIDGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPR
IFQGPVFQVRNWYDMGAFCKLASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK
ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWFKGQGQWLFYQAATLVPLTVL
ILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYMRYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSAL
VLAAVGKGPSHWVKTPRTRE
>Mature_660_residues
MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIALPRVSLIVPARNEADVIERT
VDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAARALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLG
PNEGLRHLKRIPAPLLRPIIWDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED
GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVYPTTQDIMERKVAEYSRRKDA
PAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFIDGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPR
IFQGPVFQVRNWYDMGAFCKLASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK
ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWFKGQGQWLFYQAATLVPLTVL
ILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYMRYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSAL
VLAAVGKGPSHWVKTPRTRE

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 73659; Mature: 73659

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
LPRVSLIVPARNEADVIERTVDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAA
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
RALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLGPNEGLRHLKRIPAPLLRPII
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
WDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
PTTQDIMERKVAEYSRRKDAPAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFI
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEEEE
DGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPRIFQGPVFQVRNWYDMGAFCK
CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCHHHHHHHHH
LASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK
HHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHH
ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWF
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
KGQGQWLFYQAATLVPLTVLILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYM
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSALVLAAVGKGPSHWVKTPRTRE
HHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC
>Mature Secondary Structure
MQLDTAAWVYLVAVGLHLFFFLLFLRLLWWKRYADTRYWKRRPALSLERVTARAREHGIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
LPRVSLIVPARNEADVIERTVDHLAGLTYPPHLYEVLVVTDEKEAQAAAESRTAAVTGAA
CCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHH
RALRGCADVPDPDTQAGGLIMALVAGLALDGIGEVSRRLGPNEGLRHLKRIPAPLLRPII
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHH
WDAACRLLRKGSRGVDHHVVRSLRSRLPGLGQEPLQRAYAALLSLAIPCAVAFASLRGED
HHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAALGRRLASLAAQAHHSLTRELILSLCTALAANLTARLEALAADPQLEQRLADAYREVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
PTTQDIMERKVAEYSRRKDAPAVRHVVVPADFDGRLGGRRLGVPVPSTKGRALNWALGFI
CCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEEEE
DGRSTWCGFYDAESRPDSRVLLYLAHRVVEARAADVPLPRIFQGPVFQVRNWYDMGAFCK
CCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHCCHHHHHHHHH
LASLFTAISHEWHLPVVYRSIPFVGGTNVFVETRLLVEIGGFDSTTLTEDLELGTRAWLK
HHHHHHHHCCCCCCCCHHHHCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHH
ARAWPEYLPYPSSEQTPPTFMGFYRQRLRWASGHIQVMRKIRAEGDGSPEQRRLLRSLWF
HCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC
KGQGQWLFYQAATLVPLTVLILWALGLVDPTVLPPAWRYGLHMVSTVYIGFAVYIFLRYM
CCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RYVDPASRPMMWLGQLGAVGQILVLPLAGFLFPVPYFSALVLAAVGKGPSHWVKTPRTRE
HHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA