| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51892814
Identifier: 51892814
GI number: 51892814
Start: 1820703
End: 1821143
Strand: Reverse
Name: 51892814
Synonym: STH1676
Alternate gene names: NA
Gene position: 1821143-1820703 (Counterclockwise)
Preceding gene: 51892815
Following gene: 51892811
Centisome position: 51.07
GC content: 75.96
Gene sequence:
>441_bases ATGGGCGTACGTCCGACCCGGGACGCGCTACGCGGACGCGCCCCGGCGCCGGCGGGCCGCCGCCGGCGCGTGGCGATGCT TCTGTCGGCCCTCGCGGCCGTTTTCAGTGCGCAGGTTCTGCTGACAGGCTGCTCTGCCCGACCCCTGCCCGTGCAGCCCG CCGATGCGGTCGCGGCCGCCCTGGCGCATCCGGAGGTCGCCGACTGGTACGCCGCGCACTCTGCCCCCCGGGTCCTGGCG GGGCTGAACCCCGCCGCCGCCCGGGGGCTGCAGCGCTTCCGGCCCGACGCCCTGGTCGACCTGGCCGCAGAGGGGCTCGT GGTGCGATTCACCTCGGCCCTGGGAGAGCCGCCAAAGCGGGTGGACGTCCTGATCGACAAGGACAGCGGGCAGGTGCTGG ACGTCCGCATGGGCGGGGTCGGCTGGCGCGGCTGGCGCTAG
Upstream 100 bases:
>100_bases TGTTCCCGGTGCCCTACTTCAGCGCGCTGGTGCTCGCCGCGGTGGGGAAGGGCCCCAGCCACTGGGTGAAGACCCCGCGC ACGAGGGAGTGATCGATCGG
Downstream 100 bases:
>100_bases ACCGGCCCCGCGGCCGGCTCGCCGGAGCGGCGGTGCGCCAGGAACCACTGGTAGAGCTCCGCGTTGGCGTAGGTCGGGGT CCAGGCGTCGTGGCCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MGVRPTRDALRGRAPAPAGRRRRVAMLLSALAAVFSAQVLLTGCSARPLPVQPADAVAAALAHPEVADWYAAHSAPRVLA GLNPAAARGLQRFRPDALVDLAAEGLVVRFTSALGEPPKRVDVLIDKDSGQVLDVRMGGVGWRGWR
Sequences:
>Translated_146_residues MGVRPTRDALRGRAPAPAGRRRRVAMLLSALAAVFSAQVLLTGCSARPLPVQPADAVAAALAHPEVADWYAAHSAPRVLA GLNPAAARGLQRFRPDALVDLAAEGLVVRFTSALGEPPKRVDVLIDKDSGQVLDVRMGGVGWRGWR >Mature_145_residues GVRPTRDALRGRAPAPAGRRRRVAMLLSALAAVFSAQVLLTGCSARPLPVQPADAVAAALAHPEVADWYAAHSAPRVLAG LNPAAARGLQRFRPDALVDLAAEGLVVRFTSALGEPPKRVDVLIDKDSGQVLDVRMGGVGWRGWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15416; Mature: 15285
Theoretical pI: Translated: 11.83; Mature: 11.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRPTRDALRGRAPAPAGRRRRVAMLLSALAAVFSAQVLLTGCSARPLPVQPADAVAAA CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHH LAHPEVADWYAAHSAPRVLAGLNPAAARGLQRFRPDALVDLAAEGLVVRFTSALGEPPKR HCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHEEEHHHHCCCCCC VDVLIDKDSGQVLDVRMGGVGWRGWR EEEEEECCCCCEEEEEECCCCCCCCC >Mature Secondary Structure GVRPTRDALRGRAPAPAGRRRRVAMLLSALAAVFSAQVLLTGCSARPLPVQPADAVAAA CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHH LAHPEVADWYAAHSAPRVLAGLNPAAARGLQRFRPDALVDLAAEGLVVRFTSALGEPPKR HCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHCCHHHHHHHHCCHHEEEHHHHCCCCCC VDVLIDKDSGQVLDVRMGGVGWRGWR EEEEEECCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA